prot_Ecto-sp13_S_contig9470.21082.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9470.21082.1
Unique Nameprot_Ecto-sp13_S_contig9470.21082.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length116
Homology
BLAST of mRNA_Ecto-sp13_S_contig9470.21082.1 vs. uniprot
Match: D8LFP2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP2_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 2.050e-58
Identity = 106/116 (91.38%), Postives = 108/116 (93.10%), Query Frame = 0
Query:    1 MYSVRSYAIGYAVAELPYILFISLAFCSIFYWMTGLANSAGQFFMYWLYFILWISLLVFTGMMLVMVLPNIQVAETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE 116
            MYSVRSYAIGYAVAELPYILF+SLAFCSIFYWMT LANSA QFFMYWLYFILWISL+VFTGMMLVMV      AETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE
Sbjct: 1169 MYSVRSYAIGYAVAELPYILFMSLAFCSIFYWMTDLANSAHQFFMYWLYFILWISLMVFTGMMLVMV------AETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE 1278          
BLAST of mRNA_Ecto-sp13_S_contig9470.21082.1 vs. uniprot
Match: A0A6H5K7U8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U8_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 1.360e-56
Identity = 97/116 (83.62%), Postives = 106/116 (91.38%), Query Frame = 0
Query:    1 MYSVRSYAIGYAVAELPYILFISLAFCSIFYWMTGLANSAGQFFMYWLYFILWISLLVFTGMMLVMVLPNIQVAETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE 116
            MYSVRSYAIGYAVAELPYILFISLAFCSIFYW+TGLA+SA +FFMYWLYF+     +VFTGMM VMVLPN QVA+TL  ALSSMFSLFAGFLI+PAK+PDPWLFA+YLNPLHYVVE
Sbjct:  522 MYSVRSYAIGYAVAELPYILFISLAFCSIFYWITGLADSADRFFMYWLYFLXXXXXMVFTGMMFVMVLPNTQVAQTLAGALSSMFSLFAGFLISPAKIPDPWLFAFYLNPLHYVVE 637          
BLAST of mRNA_Ecto-sp13_S_contig9470.21082.1 vs. uniprot
Match: D8LFN4_ECTSI (Pleiotropic drug resistance transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN4_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 1.020e-55
Identity = 98/116 (84.48%), Postives = 105/116 (90.52%), Query Frame = 0
Query:    1 MYSVRSYAIGYAVAELPYILFISLAFCSIFYWMTGLANSAGQFFMYWLYFILWISLLVFTGMMLVMVLPNIQVAETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE 116
            MYSVRSYAIGYAVAELPYILFISLAFCSIFYW+TGLA+SA QFFMYWLYF      +VFTGMM VMVLPN QVA+TL  ALSSMFSLFAGFLI+PAK+PDPWLFA+YLNPLHYVVE
Sbjct: 1257 MYSVRSYAIGYAVAELPYILFISLAFCSIFYWITGLADSADQFFMYWLYFXXXXXXMVFTGMMFVMVLPNTQVAQTLAGALSSMFSLFAGFLISPAKIPDPWLFAFYLNPLHYVVE 1372          
BLAST of mRNA_Ecto-sp13_S_contig9470.21082.1 vs. uniprot
Match: D7FQN0_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQN0_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 2.870e-40
Identity = 70/116 (60.34%), Postives = 91/116 (78.45%), Query Frame = 0
Query:    1 MYSVRSYAIGYAVAELPYILFISLAFCSIFYWMTGLANSAGQFFMYWLYFILWISLLVFTGMMLVMVLPNIQVAETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE 116
            MYS  +Y IGY VAE+PYI+ I+LAFC IFY++ GLA +A QFF YW+YF+LW++ +VF GMM V ++P+   A  L   L SMFS+FAGFLI+PAK+P  WL+AYYLNPLHY++E
Sbjct:  406 MYSSLAYVIGYTVAEVPYIVVITLAFCCIFYFVMGLAATAHQFFFYWMYFMLWVTFMVFNGMMFVFIIPSFSTAGVLAGTLVSMFSVFAGFLISPAKIPGLWLWAYYLNPLHYILE 521          
BLAST of mRNA_Ecto-sp13_S_contig9470.21082.1 vs. uniprot
Match: A0A835ZIR5_9STRA (ABC-2 type transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIR5_9STRA)

HSP 1 Score: 103 bits (256), Expect = 3.110e-23
Identity = 48/116 (41.38%), Postives = 80/116 (68.97%), Query Frame = 0
Query:    1 MYSVRSYAIGYAVAELPYILFISLAFCSIFYWMTGLANSAGQFFMYWLYFILWISLLVFTGMMLVMVLPNIQVAETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE 116
            MY+V+ +++G+ +AE+PY++F +L   +IFY+M  LA  A +FF       L  S + F G  + ++LP ++ A++ G  ++S F++F GFLI+PA +PD W++AYYL+PLHY +E
Sbjct: 1114 MYAVQPFSLGHFLAEIPYLIFNTLLSTTIFYFMANLAPEAAKFFWXXXXXXLNTSAMTFLGHAMTVLLPTVKAAQSFGGVINSFFAVFGGFLISPALIPDYWIWAYYLSPLHYAIE 1229          
BLAST of mRNA_Ecto-sp13_S_contig9470.21082.1 vs. uniprot
Match: A0A6G0XTE1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XTE1_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 2.410e-21
Identity = 48/116 (41.38%), Postives = 73/116 (62.93%), Query Frame = 0
Query:    1 MYSVRSYAIGYAVAELPYILFISLAFCSIFYWMTGLANSAGQFFMYWLYFILWISLLVFTGMMLVMVLPNIQVAETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE 116
            MY+   YA  Y++ E+PY+LF SL F  +FY+M  L   +G FF ++LY++L+     + G  LV VLP+++ A      L+S+ SLFAGF I+   +PD W   Y+++PLHY +E
Sbjct: 1098 MYATYPYATVYSLVEIPYVLFNSLVFSVVFYFMIDLKPDSGAFFWFYLYYMLYNLFATYLGQFLVAVLPDLRTAVVATGGLNSLISLFAGFFIHKHSIPDGWSILYWMSPLHYTLE 1213          
BLAST of mRNA_Ecto-sp13_S_contig9470.21082.1 vs. uniprot
Match: A0A7S0AHY2_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AHY2_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 5.130e-20
Identity = 47/116 (40.52%), Postives = 73/116 (62.93%), Query Frame = 0
Query:    1 MYSVRSYAIGYAVAELPYILFISLAFCSIFYWMTGLANSAGQFFMYWLYFILWISLLVFTGMMLVMVLPNIQVAETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE 116
            MY+  S    ++ AE+P+I++ SLAF  +FY+M G A+ A +FF Y L+F L ++   + G ML  +L + + A+ LGS ++ M +LF G LI P  +   WLF Y++ PLHY +E
Sbjct:  459 MYNSSSINAAFSFAEIPFIIWASLAFVVVFYFMLGFASEAAKFFTYLLFFALTLATFTYLGQMLTALLRDAETAQLLGSGVAGMSALFCGILIKPQFISSFWLFMYWITPLHYTLE 574          
BLAST of mRNA_Ecto-sp13_S_contig9470.21082.1 vs. uniprot
Match: A0A7S3HH75_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HH75_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.080e-19
Identity = 47/118 (39.83%), Postives = 72/118 (61.02%), Query Frame = 0
Query:    1 MYSVRSYAIGYAVAELPYILFISLAFCSIFYWMTGL--ANSAGQFFMYWLYFILWISLLVFTGMMLVMVLPNIQVAETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE 116
            +Y V+ Y +   + E+PY++  SL F   F+++ G    +   +FF YWLY  L++S++VF G  L   + +    + LG  LS++ SLF GFLI P   PD W+F Y+L+PLHYV+E
Sbjct:  307 LYDVKLYVLAATLVEIPYLIVTSLCFVVPFFFIVGFDQGDVTVKFFWYWLYSALYMSVMVFLGHFLSSSMKDAAAVDVLGGMLSTVISLFGGFLIRPELFPDFWIFMYWLDPLHYVIE 424          
BLAST of mRNA_Ecto-sp13_S_contig9470.21082.1 vs. uniprot
Match: A0A7S1TP17_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TP17_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 6.490e-19
Identity = 43/116 (37.07%), Postives = 71/116 (61.21%), Query Frame = 0
Query:    1 MYSVRSYAIGYAVAELPYILFISLAFCSIFYWMTGLANSAGQFFMYWLYFILWISLLVFTGMMLVMVLPNIQVAETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE 116
            MY    Y +  AVAE+PYI  + + FC ++Y+  GL  +AG FF Y+LY +LW++++ F G  +V ++P    A  +G+ +  +F+LFAGF+  P  +     F ++ +P+HYV E
Sbjct: 1251 MYRSEVYNMSIAVAEVPYIALVCMVFCVVYYFTVGLQATAGHFFEYYLYVLLWVAVMTFYGQFVVALMPTRVAAMAVGAGIVQLFNLFAGFIAPPQDINPQIQFFHWASPMHYVFE 1366          
BLAST of mRNA_Ecto-sp13_S_contig9470.21082.1 vs. uniprot
Match: A0A6U4JUK8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4JUK8_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 8.610e-19
Identity = 41/116 (35.34%), Postives = 69/116 (59.48%), Query Frame = 0
Query:    1 MYSVRSYAIGYAVAELPYILFISLAFCSIFYWMTGLANSAGQFFMYWLYFILWISLLVFTGMMLVMVLPNIQVAETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE 116
            MY+V +Y++   + E+PY++ ISL FC+++Y   G       FF+Y+L+  LWIS+  F G   V ++P    A   GS +  + + F GF+   A++P+  +F ++ +PLHYV E
Sbjct:   26 MYTVGAYSLSIGLVEIPYLIMISLVFCTVYYLSVGFTLDPVHFFLYYLFIFLWISMTTFYGQFWVALMPTRTAAMAAGSGVIQIINFFGGFIQPVAEIPNHLIFFHWASPLHYVFE 141          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9470.21082.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFP2_ECTSI2.050e-5891.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7U8_9PHAE1.360e-5683.62ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LFN4_ECTSI1.020e-5584.48Pleiotropic drug resistance transporter n=1 Tax=Ec... [more]
D7FQN0_ECTSI2.870e-4060.34ABC transporter domain-containing protein n=1 Tax=... [more]
A0A835ZIR5_9STRA3.110e-2341.38ABC-2 type transporter-domain-containing protein n... [more]
A0A6G0XTE1_9STRA2.410e-2141.38Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A7S0AHY2_9STRA5.130e-2040.52Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S3HH75_9STRA2.080e-1939.83Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A7S1TP17_9STRA6.490e-1937.07Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6U4JUK8_9STRA8.610e-1935.34Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013525ABC-2 type transporterPFAMPF01061ABC2_membranecoord: 1..116
e-value: 7.8E-21
score: 74.5
NoneNo IPR availablePANTHERPTHR19241:SF545ABC TRANSPORTER G FAMILY MEMBER 29coord: 1..113
NoneNo IPR availablePANTHERPTHR19241ATP-BINDING CASSETTE TRANSPORTERcoord: 1..113
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..75
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..93
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 94..116
NoneNo IPR availableTMHMMTMhelixcoord: 45..67
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 74..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9470contigEcto-sp13_S_contig9470:3360..4741 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9470.21082.1mRNA_Ecto-sp13_S_contig9470.21082.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9470 3348..4741 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9470.21082.1 ID=prot_Ecto-sp13_S_contig9470.21082.1|Name=mRNA_Ecto-sp13_S_contig9470.21082.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=116bp
MYSVRSYAIGYAVAELPYILFISLAFCSIFYWMTGLANSAGQFFMYWLYF
ILWISLLVFTGMMLVMVLPNIQVAETLGSALSSMFSLFAGFLINPAKVPD
PWLFAYYLNPLHYVVE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013525ABC_2_trans