prot_Ecto-sp13_S_contig946.21071.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig946.21071.1 vs. uniprot
Match: A0A6H5KJ16_9PHAE (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ16_9PHAE) HSP 1 Score: 160 bits (406), Expect = 6.380e-44 Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 0
Query: 1 GLYDPVLGPVDKMMMCATCGQDQKNCPGHMGHIELAVSVYHPILFGALYKLLRAKCFSCHNLRLSKSKTRVAAVKV 76
GLYDPVLGPVDKMMMCATCGQDQKNCPGHMGHIELAVSVYHPILFGAL+KLLRAKCFSCHNLRLSKSKTRVAAVK+
Sbjct: 49 GLYDPVLGPVDKMMMCATCGQDQKNCPGHMGHIELAVSVYHPILFGALFKLLRAKCFSCHNLRLSKSKTRVAAVKM 124
BLAST of mRNA_Ecto-sp13_S_contig946.21071.1 vs. uniprot
Match: D7FNY1_ECTSI (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY1_ECTSI) HSP 1 Score: 160 bits (405), Expect = 8.640e-44 Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0
Query: 1 GLYDPVLGPVDKMMMCATCGQDQKNCPGHMGHIELAVSVYHPILFGALYKLLRAKCFSCHNLRLSKSKTRVAAVKV 76
GLYDPVLGPVDKMMMC TCGQDQKNCPGHMGHIELAVSVYHPILFGALYKLLRAKCFSCHNLRLSKSKTRVAAVK+
Sbjct: 49 GLYDPVLGPVDKMMMCETCGQDQKNCPGHMGHIELAVSVYHPILFGALYKLLRAKCFSCHNLRLSKSKTRVAAVKM 124
BLAST of mRNA_Ecto-sp13_S_contig946.21071.1 vs. uniprot
Match: A0A662WAX4_9STRA (DNA-directed RNA polymerase (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WAX4_9STRA) HSP 1 Score: 109 bits (273), Expect = 6.540e-29 Identity = 48/79 (60.76%), Postives = 59/79 (74.68%), Query Frame = 0
Query: 1 GLYDPVLGPVDKMMMCATCGQDQKNCPGHMGHIELAVSVYHPILFGALYKLLRAKCFSCHNLRLSKSKTRVAAVKVTTL 79
GLYDP LGPVD M+C TC Q QK CPGH+GHIEL V VY+P+LFG L LL+ KCF+CH RL+ +++RV VK+ L
Sbjct: 51 GLYDPSLGPVDFNMICPTCHQTQKECPGHLGHIELPVPVYNPVLFGHLLTLLKRKCFTCHKFRLASARSRVVRVKILLL 129
BLAST of mRNA_Ecto-sp13_S_contig946.21071.1 vs. uniprot
Match: A0A836C8M0_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M0_9STRA) HSP 1 Score: 110 bits (275), Expect = 3.030e-26 Identity = 46/76 (60.53%), Postives = 57/76 (75.00%), Query Frame = 0
Query: 1 GLYDPVLGPVDKMMMCATCGQDQKNCPGHMGHIELAVSVYHPILFGALYKLLRAKCFSCHNLRLSKSKTRVAAVKV 76
GLYDP LGP + +C TCGQD +CPGH+GHIELA VYHP+LF L+KLL+ KCFSCH LR++ R+ AVK+
Sbjct: 49 GLYDPALGPSQQRAVCPTCGQDHLSCPGHVGHIELAAEVYHPLLFPILFKLLKTKCFSCHKLRMNSQTCRIYAVKM 124
BLAST of mRNA_Ecto-sp13_S_contig946.21071.1 vs. uniprot
Match: A0A024G1Q2_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G1Q2_9STRA) HSP 1 Score: 109 bits (272), Expect = 7.710e-26 Identity = 48/76 (63.16%), Postives = 57/76 (75.00%), Query Frame = 0
Query: 1 GLYDPVLGPVDKMMMCATCGQDQKNCPGHMGHIELAVSVYHPILFGALYKLLRAKCFSCHNLRLSKSKTRVAAVKV 76
GLYDP LGP+D M+C TC Q QK CPGHMGHIEL V VY+P+LF L +L+ KCF+CH LRL SK+RV VK+
Sbjct: 51 GLYDPALGPIDYNMICPTCHQTQKECPGHMGHIELPVPVYNPVLFPKLLTILKRKCFNCHKLRLDCSKSRVYRVKI 126
BLAST of mRNA_Ecto-sp13_S_contig946.21071.1 vs. uniprot
Match: H3H1S7_PHYRM (DNA-directed RNA polymerase subunit n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3H1S7_PHYRM) HSP 1 Score: 109 bits (272), Expect = 7.710e-26 Identity = 45/79 (56.96%), Postives = 59/79 (74.68%), Query Frame = 0
Query: 1 GLYDPVLGPVDKMMMCATCGQDQKNCPGHMGHIELAVSVYHPILFGALYKLLRAKCFSCHNLRLSKSKTRVAAVKVTTL 79
GLYDP +GPVD M+C TC Q QK CPGH+GHIEL V VY P+LFG ++ LL+ KCF+CH R++ +++RV VK+ L
Sbjct: 51 GLYDPAMGPVDFNMICPTCHQTQKECPGHLGHIELPVPVYSPVLFGQMFNLLKRKCFTCHKFRVASARSRVVRVKILLL 129
BLAST of mRNA_Ecto-sp13_S_contig946.21071.1 vs. uniprot
Match: A0A7S1GA41_9STRA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GA41_9STRA) HSP 1 Score: 102 bits (254), Expect = 7.930e-26 Identity = 44/76 (57.89%), Postives = 53/76 (69.74%), Query Frame = 0
Query: 1 GLYDPVLGPVDKMMMCATCGQDQKNCPGHMGHIELAVSVYHPILFGALYKLLRAKCFSCHNLRLSKSKTRVAAVKV 76
G+YDP LGP D CATC +CPGHMGH+EL V VYHP+L L++LLRAKCF CH LRL + +RV VK+
Sbjct: 78 GVYDPALGPTDLASQCATCHLSYADCPGHMGHVELCVPVYHPLLVNVLFRLLRAKCFQCHRLRLVAAASRVYYVKL 153
BLAST of mRNA_Ecto-sp13_S_contig946.21071.1 vs. uniprot
Match: A0A4P9XAF7_9FUNG (DNA-directed RNA polymerase subunit (Fragment) n=2 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9XAF7_9FUNG) HSP 1 Score: 108 bits (269), Expect = 1.960e-25 Identity = 47/77 (61.04%), Postives = 58/77 (75.32%), Query Frame = 0
Query: 1 GLYDPVLGPVDKMMMCATCGQDQKNCPGHMGHIELAVSVYHPILFGALYKLLRAKCFSCHNLRLSKSKTRVAAVKVT 77
GLYDP LGP+D+ +CATC QD +NCPGH GHIELAV VY+PI F LYKLL++ CF CH LRLS+++ K+T
Sbjct: 48 GLYDPALGPLDRKAVCATCHQDSQNCPGHFGHIELAVPVYNPISFPLLYKLLQSLCFYCHRLRLSRAQVLYFCTKLT 124
BLAST of mRNA_Ecto-sp13_S_contig946.21071.1 vs. uniprot
Match: K3X8S6_GLOUD (DNA-directed RNA polymerase subunit n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8S6_GLOUD) HSP 1 Score: 107 bits (268), Expect = 2.670e-25 Identity = 44/76 (57.89%), Postives = 58/76 (76.32%), Query Frame = 0
Query: 1 GLYDPVLGPVDKMMMCATCGQDQKNCPGHMGHIELAVSVYHPILFGALYKLLRAKCFSCHNLRLSKSKTRVAAVKV 76
GLYDP +GPVD M+C TC Q QK CPGH+GHIEL V VY+P+LFG + LL+ KCF+CH R++ +++RV VK+
Sbjct: 51 GLYDPAMGPVDFNMICPTCHQTQKECPGHLGHIELPVPVYNPVLFGHMLNLLKRKCFTCHKFRIASARSRVLRVKI 126
BLAST of mRNA_Ecto-sp13_S_contig946.21071.1 vs. uniprot
Match: A0A421EWZ9_9STRA (DNA-directed RNA polymerase subunit n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421EWZ9_9STRA) HSP 1 Score: 106 bits (265), Expect = 6.830e-25 Identity = 46/79 (58.23%), Postives = 57/79 (72.15%), Query Frame = 0
Query: 1 GLYDPVLGPVDKMMMCATCGQDQKNCPGHMGHIELAVSVYHPILFGALYKLLRAKCFSCHNLRLSKSKTRVAAVKVTTL 79
GLYDP LGPVD M+C TC Q QK CPGH+GHIEL V VY+P+LF L LL+ KCF+CH R++ + +RV VK+ L
Sbjct: 530 GLYDPALGPVDFNMICPTCHQTQKECPGHLGHIELPVPVYNPVLFNVLLTLLKRKCFTCHKFRVASASSRVIRVKILLL 608 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig946.21071.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig946.21071.1 ID=prot_Ecto-sp13_S_contig946.21071.1|Name=mRNA_Ecto-sp13_S_contig946.21071.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=90bpback to top |