mRNA_Ecto-sp13_S_contig12543.2107.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12543.2107.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI) HSP 1 Score: 861 bits (2225), Expect = 7.000e-302 Identity = 432/504 (85.71%), Postives = 449/504 (89.09%), Query Frame = 1
Query: 1 LTFRVPDANVILVGNKCDRVVSPRRTPVAVDVERESRHWLECWIERAHGHQPHGISLEDGVSLVSCAPSELSVVAPSFGGGSDWPCDKSTPGLFHRIIHNSADDTRAVTMRLPLSYRLALEMLQDLASGSTSKTEP-TRGITRAILEEKWQAKVVDMKRAGTPVAAPDAAMSGAILIRKWEGGLVEYGTYVFLDVEWFATVLDPLFCHKRDSYGNIDLGGIRVTDVDSLDRLDEEHVLEPQLAEELWGLELAPHLLLALKSAGLTFPLPNDSNGGLVILLRMDTKPPPDYGIKLKEADKANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGDGAEEGLFSLSLEYSETDKILTTEVFGRCAEVHAWAALSKVLSVTIKMLSEFPGLPCRTTFFCPRHKRKGMKMRTTDARPGSRLVGESDFCKLCQDRAAGLDLLAVALQVVGFSDEKFFDAQLREQFSKKVALQGCASWPGSNSEVSGPIPVHISPS 1509
LTFRVPDA+VILVGNKCDRVV RRT VAVDVE ESR WLE WIE A GHQP GISLEDGVSLVSCA S + VAPSFG S WPCDKSTPGLFHRII++S DDTR VTMRLP SYRLALEML++LAS S SKTE TRGITRAILEEKWQAKV +M RAGT VAAPDAAM+GAILIRKWEGGLVEYG+YVFLDVEWFATVLDPLFCHKRDSYG IDLGGIRV DVDSLDRLDEEHVLEPQLAE+LWG LAPHLLLALKSAGLTFPL NDSNGGLVILLRMDTKPPPDYGIKLKE D+ANKFDLRLVVECSF LGLPPGFVERLLARCCHLGLPYPFWRYGALIVG GAEE +FSLSLEYSE KILT EV G EV AWAALSKVLSVTIKML EFPGLPCRTTFFCP HK GMK+RT DARPGS LVGESDFCKLCQDR+A + L+AVALQVV FSDEKFFD QLREQF+ KVALQGCASWPGSNSEVSGP PVHISPS
Sbjct: 481 LTFRVPDASVILVGNKCDRVVRTRRTAVAVDVEHESRQWLESWIEIARGHQPRGISLEDGVSLVSCAASGVGAVAPSFGRRSGWPCDKSTPGLFHRIIYDSTDDTRVVTMRLPESYRLALEMLEELASCSRSKTEQQTRGITRAILEEKWQAKVAEMNRAGTSVAAPDAAMAGAILIRKWEGGLVEYGSYVFLDVEWFATVLDPLFCHKRDSYGKIDLGGIRVMDVDSLDRLDEEHVLEPQLAEDLWGPVLAPHLLLALKSAGLTFPLSNDSNGGLVILLRMDTKPPPDYGIKLKEKDQANKFDLRLVVECSFRLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGKGAEERMFSLSLEYSEARKILTVEVSGGHTEVFAWAALSKVLSVTIKMLLEFPGLPCRTTFFCPLHKTNGMKIRTKDARPGSCLVGESDFCKLCQDRSAAVGLVAVALQVVEFSDEKFFDEQLREQFAGKVALQGCASWPGSNSEVSGPAPVHISPS 984
BLAST of mRNA_Ecto-sp13_S_contig12543.2107.1 vs. uniprot
Match: D7FX69_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI) HSP 1 Score: 782 bits (2020), Expect = 1.150e-268 Identity = 397/520 (76.35%), Postives = 432/520 (83.08%), Query Frame = 1
Query: 1 LTFRVPDANVILVGNKCDRVVSPRRTPVAVDVERESRHWLECWIERAHGHQPHGISLEDGVSLVSCAPSELSVVAPSFGGGSDWPCDKSTPGLFHRIIHNSADDTRAVTMRLPLSYRLALEMLQDLASGSTSKTEP-TRGITRAILEEKWQAKVVDMKRAGTPVAAPDAAMSGAILIRKWEGGLVEYGTYVFLDVEWFATVLDPLFCHKRDSYGNIDLGGIRVTDVDSLDRLDEEHVLEPQLAEELWGLELAPHLLLALKSAGLTFPLPNDSNGGLVILLRMDTKPPPDYGIKLKEADKANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGDGAEEGLFSLSLEYSETDKILTTEVFGRCAEVHAWAALSKVLSVTIKMLSEFPGLPCRTTFFCPRHKRKGMKMRTTDARPGSRLVGESDFCKLCQDRAAGLDLLAVALQVVGFSDEKFFDAQLREQFSK---KVALQGCASWPGSNSEV--SGPIPVHISPSIQVPEQTISSS 1542
LTFRVPDANVILVGNK DRVV R T VA DVE ESR WL+ W+E+AHGHQPHG+SLEDGVSLVSCA S L V AP+FGGG+ WPCDKSTPGLFHR+I++ DD R VTM LP SYRLALEML++LAS S K E TRGITRA LEEKW AKV ++ AGTPVAAP+AAM GAILIRKWEGGLVEYG YVFLDVEWFATVLDPLF H+RDSYG+IDLGGIRVT++ SL RLD EHV EPQLAEELW ELAPHLLLALKSAGLTFPLPND NGGLVILLRMDT PP+YGIKL++ KA++ DLRL V CSFSLGLPPGFVERLLARCCH+G P+PFWRYGALIVG+GAE+GLFSLS+EYSE DKIL EVFG C EVHAWAALSKVLSV IKMLSEFPGLPC FFCP+HK KGM +RTTD RPGS LV ES FC+LCQDR AG+DLLA ALQVV FSDEKF D LREQF++ KVA QGCA WPG N EV SGP ISP IQ P Q SS+
Sbjct: 646 LTFRVPDANVILVGNKWDRVVRTRGT-VADDVECESRRWLKSWMEKAHGHQPHGLSLEDGVSLVSCAQSGLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRADLEEKWHAKVAELNGAGTPVAAPEAAMPGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTTRPPEYGIKLEQVHKASEADLRLTVACSFSLGLPPGFVERLLARCCHMGYPFPFWRYGALIVGNGAEKGLFSLSVEYSEEDKILALEVFGGCEEVHAWAALSKVLSVMIKMLSEFPGLPCELMFFCPQHKTKGMPIRTTDGRPGSCLVEESYFCQLCQDREAGIDLLAAALQVVEFSDEKFLDEPLREQFAENAEKVARQGCALWPGMNYEVEVSGPASSGISPGIQAPAQIRSSN 1164
BLAST of mRNA_Ecto-sp13_S_contig12543.2107.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI) HSP 1 Score: 742 bits (1916), Expect = 3.210e-254 Identity = 382/519 (73.60%), Postives = 423/519 (81.50%), Query Frame = 1
Query: 1 LTFRVPDANVILVGNKCDRVVSPRRTPVAVDVERESRHWLECWIERAHGHQPHGISLEDGVSLVSCAPSELSVVAPSFGGGSDWPCDKSTPGLFHRIIHNSADDTRAVTMRLPLSYRLALEMLQDLASGSTSKTEP-TRGITRAILEEKWQAKVVDMKRAGTPVAAPDAAMSGAILIRKWEGGLVEYGTYVFLDVEWFATVLDPLFCHKRDSYGNIDLGGIRVTDVDSLDRLDEEHVLEPQLAEELWGLELAPHLLLALKSAGLTFPLPNDSNGGLVILLRMDTKPPPDYGIKLKEADKANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGDGAEEGLFSLSLEYSETDKILTTEVFGRCAEVHAWAALSKVLSVTIKMLSEFPGLPCRTTFFCPRHKRKGMKMRTTDARPGSRLVGESDFCKLCQDRAAGLDLLAVALQVVGFSDEKFFDAQLREQFSK---KVALQGCASWPGSNSE--VSGPIPVHISPSIQVPEQTISS 1539
LTFRVP+ANVILVGNK DRVV R T VA DVE ESR WL+ W+E+AHGHQPHG+SLEDGVSLVSCA S L V AP+FGGG+ WPCDKSTPGLFHR+I++ DD R VTM LP SYRLALEML++LAS S K E TRGITRA LEEKW AKV ++ AGTPVAAP+AAM GAILIRKWEGGLVEYG YVFLDVEWFATVLDPLF H+RDSYG+IDLGGIRVT++ SL RLD EHV EPQLAEELW ELAPHLLLALKSAGLTFPLPND NGGLVILLRMDT PP+Y I+ +EA++A K+DL L V CSFSLGLPPGFVERLLARCCHLG PYPFWRYGALIVG+GAE+GLFSLSL+YSE D +L EV G EVHAWAALSKVLSV IKMLSEFPGLPC FFCP+HK KGM +RTTDA PGS LV + FC LCQD AG +LLA ALQVV FSDE+FFD LR++F++ KVA +GCAS GS+ E VSG ISPS + P T SS
Sbjct: 553 LTFRVPNANVILVGNKWDRVVRTRGT-VADDVECESRRWLKSWMEKAHGHQPHGLSLEDGVSLVSCAQSCLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRADLEEKWHAKVAELNGAGTPVAAPEAAMPGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTTRPPEYSIRREEANQARKYDLTLSVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIVGNGAEKGLFSLSLDYSEHDNMLKVEVLGGGEEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFFCPQHKTKGMPIRTTDAPPGSGLVEKGYFCPLCQDPTAGNNLLAAALQVVEFSDEEFFDEPLRQKFAENAEKVARKGCASQQGSHFEGGVSGSTSSDISPSSRAPAPTRSS 1070
BLAST of mRNA_Ecto-sp13_S_contig12543.2107.1 vs. uniprot
Match: A0A6H5JSC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC0_9PHAE) HSP 1 Score: 712 bits (1839), Expect = 2.680e-248 Identity = 373/499 (74.75%), Postives = 400/499 (80.16%), Query Frame = 1
Query: 1 LTFRVPDANVILVGNKCDRVVSPRRTPVAVDVERESRHWLECWIERAHGHQPHGISLEDGVSLVSCAPSELSVVAPSFGGGSDWPCDKSTPGLFHRIIHNSADDTRAVTMRLPLSYRLALEMLQDLASGSTSKTEP-TRGITRAILEEKWQAKVVDMKRAGTPVAAPDAAMSGAILIRKWEGGLVEYGTYVFLDVEWFATVLDPLFCHKRDSYGNIDLGGIRVTDVDSLDRLDEEHVLEPQLAEELWGLELAPHLLLALKSAGLTFP-LPNDSNGGLVILLRMDTKPPPDYGIKLKEADKANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGDGAEEGLFSLSLEYSETDKILTTEVFGRCAEVHAWAALSKVLSVTIKMLSEFPGLPCRTTFFCPRHKRKGMKMRTTDARPGSR------LVGESDFCKLCQDRAAGLDLLAVALQVVGFSDEKFFDAQLREQFSKKVALQGCASWPGSNSE 1473
LTFRVPDA+VILVGNKCD VV RRT VA DVE ESR WLE IE A GHQP GISLEDGVSLVSCA S + VVAPSFG GS WP DK+TPGL+ RI +NSA TRAVTM LP SYRLAL+ML++LAS S SKTE RG+TRAILE+KWQ KV +M R GT V+APDAAM+GAILIRKWEGGLVEY +YVFLDVEWFATVLDPLFCHKRDSYG I LGG+RVTDVD LDRLDE+HVLEPQLAEE W FP LPNDSNGGLVILLRMDTKP PDYGIKLKEAD+ANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPYPFWRYGALIVG GAE +FSLSLEYSE KILT EV G EV AWAALSKVLSVTIKMLSEFPGLPC TTFFCP HK K MK+RT D + V S L +DRAAG+DLLAVALQVV FSDE+FFD LREQF++K+AL+GCASW GS SE
Sbjct: 191 LTFRVPDASVILVGNKCDHVVRTRRTVVAADVEHESRQWLESLIEIARGHQPRGISLEDGVSLVSCAASGVGVVAPSFGAGSGWPFDKNTPGLYRRIAYNSASRTRAVTMHLPESYRLALKMLEELASCSRSKTEQHIRGVTRAILEDKWQTKVAEMNRVGTSVSAPDAAMAGAILIRKWEGGLVEYSSYVFLDVEWFATVLDPLFCHKRDSYGKIYLGGMRVTDVDGLDRLDEDHVLEPQLAEEDWR-----------------FPSLPNDSNGGLVILLRMDTKPSPDYGIKLKEADQANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGKGAEVRMFSLSLEYSEERKILTVEVSGGRTEVFAWAALSKVLSVTIKMLSEFPGLPCGTTFFCPLHKTKRMKIRTKDVSARACRSKYVFFVLRSQKFYLNKDRAAGIDLLAVALQVVEFSDEEFFDESLREQFAEKMALRGCASWLGSISE 672
BLAST of mRNA_Ecto-sp13_S_contig12543.2107.1 vs. uniprot
Match: A0A6H5JRW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRW5_9PHAE) HSP 1 Score: 609 bits (1571), Expect = 1.050e-206 Identity = 317/499 (63.53%), Postives = 367/499 (73.55%), Query Frame = 1
Query: 1 LTFRVPDANVILVGNKCDRVVSPRRTPVAVDVERESRHWLECWIERAHGHQPHGISLEDGVSLVSCAPSELSVVAPSFGGGSDWPCDKSTPG---LFHRIIHNSADDTRAVTMRLPLSYRLALEMLQDLASGSTSKTEPTRGITRAILEEKWQAKVVDMKRAGTPVAAPDAAMSGAILIRKWEGGLVEYGTYVFLDVEWFATVLDPLFCHKRDSYGNIDLGGIRVTDVDSLDRLDEEHVLEPQLAEELWGLELAPHLLLALKSAGLTFPLPNDSNGGLVILLRMDTKPPPDYGIKLKEADKANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGDGAEEGLFSLSLEYSETDKILTTEVFGRCAEVHAWAALSKVLSVTIKMLSEFPGLPCRTTFFCPRHKRKGMK-MRTTDARPGSRLVGESDFCKLCQDRAAGLDLLAVALQVVGFSDEKFFDAQLREQFS---KKVALQGCASWPGSNSEV 1476
+TFRVPDANV+LVGNK D +V+ VA DVER+SR WL WIE AH HQP +SLE GVSLVSCAPS + APSFGG WPCDK+ PG LF RII+N DD RAVTMRL Y LAL +L++LAS S +V + AGT AA +AA+SGAILIRKWEGGLVEYG Y+FLDV WFA VLDPLF HK+DS G I LGG VT+ DSL RLD H+ EP+LAE+LWG ELAPHLL AL SAGLTFP+PND GLV++LRMDT+PPPDY ++E +DLRLVV+CSF LGLPPGFVERLLARCCHLG P+PFWRYGAL+VG GAEEG FSL+LEYSE DK L +V GRC+EVHAWA LSKVLSVTIKMLSEFPGLPC+ F CPRH+ K M+ ++ +ARPGSRLV E +FC +C DR AG DLL AL VV +SD +F DAQLR++F+ K+VA QG A WP S +EV
Sbjct: 180 MTFRVPDANVVLVGNKWD-LVAEANLHVADDVERKSREWLTAWIESAHRHQPPQLSLEAGVSLVSCAPSGRAGWAPSFGGRKAWPCDKNKPGQPGLFRRIIYNPVDDMRAVTMRLSPVYVLALNLLEELASRS---------------------RVDALGTAGTTAAASEAALSGAILIRKWEGGLVEYGNYIFLDVGWFADVLDPLFSHKKDSNGIIYLGGKTVTNDDSLKRLDANHIFEPRLAEDLWGAELAPHLLSALNSAGLTFPIPNDPFEGLVVVLRMDTEPPPDYRTIVEEEQARKYYDLRLVVQCSFRLGLPPGFVERLLARCCHLGFPHPFWRYGALVVGAGAEEGKFSLTLEYSEEDKTLKVQVNGRCSEVHAWATLSKVLSVTIKMLSEFPGLPCQLEFLCPRHEDKSMRVLKANNARPGSRLVEEGNFCPVCPDRTAGNDLLGAALHVVEYSDTEFSDAQLRKRFADNAKRVARQGRALWPASVTEV 656
BLAST of mRNA_Ecto-sp13_S_contig12543.2107.1 vs. uniprot
Match: A0A6H5KNW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNW8_9PHAE) HSP 1 Score: 556 bits (1432), Expect = 1.100e-190 Identity = 276/359 (76.88%), Postives = 305/359 (84.96%), Query Frame = 1
Query: 409 TRGITRAILEEKWQAKVVDMKRAGTPVAAPDAAMSGAILIRKWEGGLVEYGTYVFLDVEWFATVLDPLFCHKRDSYGNIDLGGIRVTDVDSLDRLDEEHVLEPQLAEELWGLELAPHLLLALKSAGLTFPLPNDSNGGLVILLRMDTKPPPDYGIKLKEADKANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGDGAEEGLFSLSLEYSETDKILTTEVFGRCAEVHAWAALSKVLSVTIKMLSEFPGLPCRTTFFCPRHKRKGMKMRTTDARPGSRLVGESDFCKLCQDRAAGLDLLAVALQVVGFSDEKFFDAQLREQFSK---KVALQGCASWPGSNSEV 1476
TRGITRA LEEKWQAKV ++ AGTPVAAP+AA+SGAILIRKWEGGLVEYG YVFLDVEWFATVLDPLF H+RDSYG+IDLGGIRVT++ SL RLD EHV EPQLAEELW ELAPHLLLALKSAGLTFPLPND NGGLVILLRMDTK PP+Y I+ +EA++A K+DL L V C FSLG+PPGFVERLLARCC LG+PYPFWRYGAL+VG+GAEEGLFSLSL+YSE D +L EV G EVHAWAALSKVLSV IKMLSEFPGLPC FFCP+HK KGM +RTTDA GS LV ES FC LCQDR AG+DLLA ALQVVGFSDE+FFD LR +F++ +V QGCAS GS+SEV
Sbjct: 22 TRGITRADLEEKWQAKVAELSGAGTPVAAPEAAISGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRVTNIASLRRLDNEHVFEPQLAEELWSRELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKSPPEYSIRREEANQARKYDLTLTVACWFSLGVPPGFVERLLARCCRLGVPYPFWRYGALVVGNGAEEGLFSLSLDYSEHDNMLKVEVLGGGGEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFFCPQHKTKGMPVRTTDAPAGSGLVEESYFCPLCQDRKAGIDLLAAALQVVGFSDEEFFDEPLRREFAENAERVTRQGCASQHGSDSEV 380
BLAST of mRNA_Ecto-sp13_S_contig12543.2107.1 vs. uniprot
Match: A0A6H5KZA7_9PHAE (G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZA7_9PHAE) HSP 1 Score: 508 bits (1307), Expect = 1.360e-169 Identity = 292/498 (58.63%), Postives = 328/498 (65.86%), Query Frame = 1
Query: 1 LTFRVPDANVILVGNKCDRVVSPRRTPVAVDVERESRHWLECWIERAHGHQPHGISLEDGVSLVSCAPSELSVVAPSFGGGSDWPCDKSTPGLFHRIIHNSADDTRAVTMRLPLSYRLALEMLQDLASGSTSKTEP-TRGITRAILEEKWQAKVVDMKRAGTPVAAPDAAMSGAILIRKWEGGLVEYGTYVFLDVEWFATVLDPLFCHKRDSYGNIDLGGIRV-TDVDS-LDRLDEEHVLEPQLAEELWGLELAPHLLLALKSAGLTFPLPNDSNGGLVILLRMDTKPPPDYGIKLKEADKANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGDGAEEGLFSLSLEYSETDKILTTEVFGRCAEVHAWAALSKVLSVTIKMLSEFPGLPCRTTFFCPRHKRKGMKMRTTDARPGSRLVGESDFCKLCQDRAAGLDLLAVALQVVGFSDEKFFDAQLREQFS---KKVALQGCASWPGSNSEV 1476
LTFRVPDAN++LVGNK DRV RRT VA D+E ESR WL +LVSC+PS L ++APSFG +DWPC KSTP LFHRII N DD RAVTM +P Y++ALEML++LAS S K E TRGITRA LE+KWQAKV ++ AGTPVAAP+AAMSGAILI HKRD G+IDLGGIRV D + LDRLD +HV EP+LAE LW ELA HLLLALKSAGLTFPLP DSNGGLVI LRMDT P+YGIKL++ KA++ DL+L V+CSFSLGLP GFVER LA+CCH+G PYPFWRYGALIV DG DKIL EVFG C EVHAWAALSKVLSV IKML+ LP RPGS LV ES C+LCQDRAAG+DLLA ALQV+ FSDEKFFD LREQF+ KKVA + CA WPG N EV
Sbjct: 226 LTFRVPDANMVLVGNKLDRVAKARRT-VADDLESESRQWL---------------------NLVSCSPSGLGILAPSFGARTDWPCGKSTPELFHRIIFNPVDDKRAVTMHIPPGYQVALEMLEELASSSRRKAEQRTRGITRADLEQKWQAKVAELNSAGTPVAAPEAAMSGAILIS-----------------------------HKRDLDGHIDLGGIRVPNDARARLDRLDRDHVFEPKLAEGLWSPELASHLLLALKSAGLTFPLPQDSNGGLVINLRMDTTRLPEYGIKLEQVHKASEPDLKLTVKCSFSLGLPLGFVERFLAQCCHVGYPYPFWRYGALIVDDG---------------DKILALEVFGGCEEVHAWAALSKVLSVVIKMLTS--SLP----------------------RPGSCLVEESYICQLCQDRAAGIDLLAAALQVLEFSDEKFFDEPLREQFAENAKKVARKDCALWPGMNYEV 633
BLAST of mRNA_Ecto-sp13_S_contig12543.2107.1 vs. uniprot
Match: A0A6H5KED3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KED3_9PHAE) HSP 1 Score: 395 bits (1015), Expect = 4.120e-129 Identity = 201/320 (62.81%), Postives = 237/320 (74.06%), Query Frame = 1
Query: 520 ILIRKWEGGLVEYGTYVFLDVEWFATVLDPLFCHKRDSYGNIDLGGIRVT-DVDSLDRLDEEHVLEPQLAEELWGLELAPHLLLALKSAGLTFPLPNDSNGGLVILLRMDTKPPPDYGIKLKEADKANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGDGAEEGLFSLSLEYSETDKILTTEVFGRCAEVHAWAALSKVLSVTIKMLSEFPGLPCRTTFFCPRHKRKGMKMRTTDARPGSRLVGESDFCKLCQDRAAGLDLLAVALQVVGFSDEKFFDAQLREQFSK---KVALQGCASWPGSN 1467
I++ KWEGGLVEYG+YVFLDV+WFA VLDPLF HKR+ YG+IDLGG VT +V SL RLD +H+ EP+LAEELWG +LA HLL ALKSAGLTFP+PND N GLVIL+RM KPPP Y KLK+A A K+DL+L+ C F LGLPPG +ER+LARCC LG PYPFWRYGALI G+G + G FS L YS+ +K+L V G +V AWA LSKVLSV IKMLSE+ GLPC FCP H+ K M + T + +PGSRLV ESDFC LC DR AG+ LA ALQVV FSD F D QL ++F++ KVA + C W SN
Sbjct: 2 IVVEKWEGGLVEYGSYVFLDVQWFAEVLDPLFSHKRNLYGSIDLGGRSVTKNVRSLRRLDNDHIFEPRLAEELWGPDLARHLLAALKSAGLTFPMPNDPNEGLVILVRMKDKPPPGYDTKLKQAIAARKYDLKLIFHCKFRLGLPPGLIERILARCCQLGHPYPFWRYGALISGEGGQ-GSFSADLRYSDENKLLEIVVHGGREKVDAWATLSKVLSVLIKMLSEYGGLPCEPQLFCPLHEEKSMPI-TRNTKPGSRLVEESDFCPLCLDRRAGISFLAAALQVVEFSDTCFLDEQLSKEFAENATKVAHKICEPWLSSN 319
BLAST of mRNA_Ecto-sp13_S_contig12543.2107.1 vs. uniprot
Match: D7FM75_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM75_ECTSI) HSP 1 Score: 317 bits (812), Expect = 6.010e-92 Identity = 204/491 (41.55%), Postives = 262/491 (53.36%), Query Frame = 1
Query: 1 LTFRVPDANVILVGNKCDRV-------VSPRRTPVAVDVERESRHWLECWI-ERAHGHQPHGISLEDGVSLVSCAPSELSVVAPSFGGGSDWPCDKSTPGLFHRIIHNSADDTRAVTMRLPLSYRLALEMLQDLASGSTSKTEPT-RGITRAILEEKWQAKVVDMKRAGTPVAAPDAAMSGAILIRKWEGGLVEYGTYVFLDVEWFATVLDPLFCHKRDSYGNIDLGGIRVTDVDSLDRLDEEHVLEPQLAEELWGLELAPHLLLALKSAGLTFPLPNDSNGGLVILLRMDTKPPPDYGIKLKEADKANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGDGAEEGLFSLSLEYSETDKIL----TTEVFGRCAEVHAWAALSKVLSVTIKMLSEFPGLPCRTTFFCPRHKRKGMKMRTTDA---RPGSRLVGESDFCKLC--QDRAAGLDLLAVALQVVGFSDEKFFDAQLREQF 1419
L+FRVP A VILVG KCDRV R + A VE R W+ W +R H H I+ E+GVSLV+C + GG WPCD S P L HRI R V LPLS+ AL +L + A + +P RG+ R L+ W KV ++KR G + A + A+ GAI I +EG LV YG++V +DV+W ATVL PL HK S G ++LGGI V ++RL ++ +LEP+LAEELW + HLL AL SAGLTFP PND GGLV+LLR+D P D G L + ++ D ++V C+ G PPGF+ERLL+ CC LG FWRYG LI + FS+ LEY+E D L + + FG W ALS LSV KMLSEFPG+ T CP H G ++ D RP + E D C+ C + L + L VV +D F A +F
Sbjct: 476 LSFRVPGAAVILVGTKCDRVKDTDGETTEARLSRAAGMVEDNIRSWIHKWTTQRLHNHHAQSIAFENGVSLVNCG-----LPCDELDGG--WPCDVSQPSLLHRITFKDGK-ARGVDADLPLSWGCALSLLDETAR--RVRGQPGFRGVERTELDGLWHDKVDELKRGGHEMEATEHALDGAISIMAYEGSLVVYGSFVIVDVQWLATVLKPLCSHKDMSMGEVNLGGITVRPGPRVERLVKDGILEPKLAEELWP-DTWEHLLRALSSAGLTFPRPNDKEGGLVVLLRLDKDRPDDVGDILDDFRASH--DGQIVASCTLLQGAPPGFIERLLSTCCRLGSCNHFWRYGVLI-----QSRSFSVILEYAEDDDTLVGKFSVDAFGDSRTAGPWLALSGCLSVLSKMLSEFPGMDVEATLECPYHS-GGSRLIPIDLYQRRPWQCFIREVDGCRRCIHEGEQNARHLFSRGLVVVPVTDSGFDTAGFTRKF 947
BLAST of mRNA_Ecto-sp13_S_contig12543.2107.1 vs. uniprot
Match: A0A6H5K1K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K4_9PHAE) HSP 1 Score: 236 bits (603), Expect = 1.760e-63 Identity = 181/530 (34.15%), Postives = 251/530 (47.36%), Query Frame = 1
Query: 1 LTFRVPDANVILVGNKCDRVVSPRRTPVAVDVERESRHWLECWIERAH-----------------GHQPHGISLEDGVSLVSCAPSELSV----VAPSFGGGSDWPCD-------KSTPGLFHRIIHN-SADDTRAVTMRLPLSYRLALEMLQ----------------------DLASGSTSKTEPTRGITRAILEEKWQAKVVDMKRAGTPVAAPDAAMSGAILIRKWEGGLVEYGTYVFLDVEWFATVLDPLFCHK-RDSY-GNIDLGGIRVT--------DVDSLDRLDEEHVLEPQLAEELWGLELAPHLLLALKSAGLTFPLPNDSNGGLVILLRMDTKPPPDYGIKLKEADKANKFDLRLVVECSFS----LGLPPGFVERLLARCCHLGLPYPFWRYGALIVGD-GAEEG--LFSLSLEYSETDKILTTEVFGRCAEVHAWAALSKVLSVTIKMLSEFPGLPCRTTFFCPRHKRKGMKMRTTD-ARPGSRLVGESDFCKLCQDRAAGLDLLAVALQVVGFSD 1383
++ R+PD +VILV KCD R + +E+ R WL W+ A G QP + LE V L S P + A + G W CD + P HR+++ R LP S+ +AL +L+ D A + KT+ +GIT L KWQ V +++R G V A+ GA+ +R+++G LV +VFLDV W A +L PL HK ++++ G ++LG T D+ S DRL +E VLEP+LA +W L+ ++L L S GLTFPL ND + GLV+LLR+ P G + + F L S S LG+PPG VE++L RCC LG FWRYG L+ G G ++G F++ LEYS TD LT ++FG + AW ALS V+S ML +FPGL + + CP+H G M D AR G + E C C GL A A+ +V F D
Sbjct: 125 ISRRIPDNDVILVATKCDLAGGNARE-IGSRMEKACRTWLSGWVRNAXXXXXXXXXXXXXXXXXXGMQP--VRLEPHVCLTSSLPVRVDEHGDRSAGNHGSKGGWACDWRDEEDDQPPPSFLHRLVNKPDGRGLRGTQTVLPRSWDIALTVLEALEHGRDPVEAVLGKSPDPDGEDAAETAGGKTDVYQGITVEELGTKWQETVDELERRGITVTNAKNALEGALSVREFDGSLVRRENFVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDTPITLDDPSDITSWDRLKKEGVLEPKLAYAMWPDGLSEYVLPTLASLGLTFPLENDPDEGLVVLLRLKPNRPESVGKVI------DTFCSGLTPAFSASWKIFLGVPPGAVEKVLTRCCGLGGVRTFWRYGVLVHGSLGVQDGRRTFAVVLEYSSTDNELTAKIFGDISTPAAWVALSYVMSAVRLMLVDFPGLRWKGSLKCPQH---GDAMLFVDMARRGGDKLLEGSRCPQCSVDTGGLG--AAAIDLVRFVD 640 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12543.2107.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12543.2107.1 >prot_Ecto-sp13_S_contig12543.2107.1 ID=prot_Ecto-sp13_S_contig12543.2107.1|Name=mRNA_Ecto-sp13_S_contig12543.2107.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=458bp MRLPLSYRLALEMLQDLASGSTSKTEPTRGITRAILEEKWQAKVVDMKRAback to top mRNA from alignment at Ecto-sp13_S_contig12543:1..3281+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12543.2107.1 ID=mRNA_Ecto-sp13_S_contig12543.2107.1|Name=mRNA_Ecto-sp13_S_contig12543.2107.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3281bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12543:1..3281+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12543:1..3281+ >mRNA_Ecto-sp13_S_contig12543.2107.1 ID=mRNA_Ecto-sp13_S_contig12543.2107.1|Name=mRNA_Ecto-sp13_S_contig12543.2107.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1374bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12543:1..3281+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |