prot_Ecto-sp13_S_contig12541.2106.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12541.2106.1
Unique Nameprot_Ecto-sp13_S_contig12541.2106.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length160
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12541.2106.1 vs. uniprot
Match: D8LCW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW9_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 4.650e-69
Identity = 138/169 (81.66%), Postives = 140/169 (82.84%), Query Frame = 0 
Query:    1 MAFEFSSLMYLTGLKIYYEVYLGNVAPPEELPSLFDASRSG----------RIGRMPSKLSLDAIXXXXXXXXXXXXXXXSSFRDASSNRGVHPQGQPGVVGIASLHLPRPLVMGRTRSRPHSPDAVSGGGTEVGSGAIPRHEQRAHEAKEAQASAVAADDGIHVPPSE 159
            MAFEFSSLMYLTGLKIYYEV LGNVAPPEELPSL +A+RSG          RIGRMPSKLSLDAI XXXXXXXXXXXXXX S RDASSN  V PQGQP V G  SL LPRP VMGRTRSRPHSPDAVSG GTEVG GAIPRHEQRA EAKEAQASAVAADD IHV PSE
Sbjct:   70 MAFEFSSLMYLTGLKIYYEVCLGNVAPPEELPSLLEANRSGPXXXXXXXXGRIGRMPSKLSLDAIDXXXXXXXXXXXXXXXSLRDASSNGVVCPQGQPSVSGTTSLDLPRPPVMGRTRSRPHSPDAVSGAGTEVGGGAIPRHEQRADEAKEAQASAVAADDSIHVLPSE 238
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BLAST of mRNA_Ecto-sp13_S_contig12541.2106.1 vs. uniprot
Match: A0A6H5JYM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYM3_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 1.270e-8
Identity = 33/56 (58.93%), Postives = 34/56 (60.71%), Query Frame = 0 
Query:   46 MPSKLSLDAIXXXXXXXXXXXXXXXSSFRDASSNRGVHPQGQPGVVGIASLHLPRP 101
            MPSKLSLDAI               SSFRDAS+N  V PQGQP VVG ASL LP P
Sbjct:    1 MPSKLSLDAIDDASKSGRRRTMLSKSSFRDASNNSVVCPQGQPSVVGTASLDLPAP 56
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12541.2106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCW9_ECTSI4.650e-6981.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYM3_9PHAE1.270e-858.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12541contigEcto-sp13_S_contig12541:54..1025 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12541.2106.1mRNA_Ecto-sp13_S_contig12541.2106.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12541 51..1025 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12541.2106.1 ID=prot_Ecto-sp13_S_contig12541.2106.1|Name=mRNA_Ecto-sp13_S_contig12541.2106.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=160bp
MAFEFSSLMYLTGLKIYYEVYLGNVAPPEELPSLFDASRSGRIGRMPSKL
SLDAIDDGSKSGRRSRMLSKSSFRDASSNRGVHPQGQPGVVGIASLHLPR
PLVMGRTRSRPHSPDAVSGGGTEVGSGAIPRHEQRAHEAKEAQASAVAAD
DGIHVPPSE*
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