mRNA_Ecto-sp13_S_contig12540.2105.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12540.2105.1 vs. uniprot
Match: A0A6H5L0Y3_9PHAE (GT24 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y3_9PHAE) HSP 1 Score: 506 bits (1303), Expect = 5.830e-167 Identity = 390/455 (85.71%), Postives = 398/455 (87.47%), Query Frame = 1
Query: 1 KSPRFLLSVTRAVMSPPGPDGRGNNAANTVETLAREAGLSPSLRAAVTKAAAAGEASSSARRTRMARLARSVAGTAKGESCALVNGRRVTPAREGRSLTSDDLSIAIEAADDLAEFLKDLALSWDWGSWPEGSPQDKDPDLVGAELQSTVISQLASFLLRFHQ-----ERRQMIPDAVALAEILVETVAEVAAARXXXXXXXXXXXXXXXXXXXXXXXXXGVSGDGVVSVLRLGPDGHLHRGSVGGAAAADVEQEEDADGAGDAXXXXXXXXXXXXXXXXXXXXXXXXXAAGGDTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKGEEKLGMGQVAVELVAVLDPLSVAAQRASTLLSLAQEVLGLPVTLLLLPSLDVSELPLKNFYRLVLGPASGSVAAFYRLPTRDILTQRLDTPEPWNVQASAALQDLDN 1350
KSPRFLLSVTRA S PGPDG+GN+AAN VETLAREAGLSPSLRAAVTKAA RMARLAR VAGTAKGESCALVNGRRVTPAREGRSLTS+DLSIAIEAADDLAEFLKDLALSWDWGSWPEGSPQDKDPD+VGAELQSTVISQLASFLLRFHQ ERRQMIPDAVALAEILVETVAEVAAARXXXXXXXXXXXXXXXXXXXXXXXXX VSGDGVVSVLRLGPDGHLHRGSVGGAAAA VEQ+ DA XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+GEE+LGMGQVAVELVAVLDPLS+AAQRASTLLSLAQEVLGLPVTLLLLPSLDVSELPLKNFYRLVLGPASGSVAAF RLPTRDILTQRLDTPEPWNVQA AALQDLDN
Sbjct: 139 KSPRFLLSVTRAATSSPGPDGKGNSAANMVETLAREAGLSPSLRAAVTKAAXXXXXXXXXXXXRMARLARRVAGTAKGESCALVNGRRVTPAREGRSLTSEDLSIAIEAADDLAEFLKDLALSWDWGSWPEGSPQDKDPDMVGAELQSTVISQLASFLLRFHQASENDERRQMIPDAVALAEILVETVAEVAAARXXXXXXXXXXXXXXXXXXXXXXXXX-VSGDGVVSVLRLGPDGHLHRGSVGGAAAAAVEQDGDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAAAEAEGAEGEGVVEEDEGEEELGMGQVAVELVAVLDPLSLAAQRASTLLSLAQEVLGLPVTLLLLPSLDVSELPLKNFYRLVLGPASGSVAAFDRLPTRDILTQRLDTPEPWNVQAFAALQDLDN 592
BLAST of mRNA_Ecto-sp13_S_contig12540.2105.1 vs. uniprot
Match: D7G654_ECTSI (UDP-glucose:glycoprotein glucosyltransferase, C-terminal, family GT24 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G654_ECTSI) HSP 1 Score: 371 bits (953), Expect = 3.040e-115 Identity = 320/457 (70.02%), Postives = 335/457 (73.30%), Query Frame = 1
Query: 1 KSPRFLLSVTRAVMSPPGPDGRGNNAANTVETLAREAGLSPSLRAAVTKAAAAGEASSSARRTRMARLARSVAGTAKGESCALVNGRRVTPAREGRSLTSDDLSIAIEAADDLAEFLKDLALSWDWGSWPEGSPQDKDPDLVGAELQSTVISQLASFLLRFHQERRQMIPDAVALAEILVETVAEVAAARXXXXXXXXXXXXXXXXXXXXXXXXXG--VSGDGVVSVLRLGPDGHLHRGSVGGAAAADVEQE-----EDADGAGDAXXXXXXXXXXXXXXXXXXXXXXXXXAAGGDTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKGEEKLGMGQVAVELVAVLDPLSVAAQRASTLLSLAQEVLGLPVTLLLLPSLDVSELPLKNFYRLVLGPASGSVAAFYRLPTRDILTQRLDTPEPWNVQASAALQDLDN 1350
KSPRFLLSVTRA MS PGPDG NAA+TVETLAREAGLSPSLRAAV KAA RMARLARSVAGTA+GESCALVNGRRV + A+ + + L D W P+ ++GAELQSTVISQLASFLLRFHQERRQMIPDAVAL EILV+TVAEVAAARXXXXXXXXXXXXXXXXXXXXXXXXX V+ DGVVSVLRLGPDGHL RG+VGGAA +DADG GDA XXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXX D+G E+LGMGQVAVELVAVLDPLSVAAQRASTLLSLAQEVLGLPVTLLLLPSLDVSELPLKNFYRLVLGPASGSVAAF RLP RDILTQRLDTPEPWNVQASAALQDLDN
Sbjct: 163 KSPRFLLSVTRAAMSSPGPDGEAKNAADTVETLAREAGLSPSLRAAVAKAAXXXXXXXXXXXXRMARLARSVAGTARGESCALVNGRRVMSSGP-----------ALRPTESIHRVLVD---------WRASGPRWFH--ILGAELQSTVISQLASFLLRFHQERRQMIPDAVALGEILVQTVAEVAAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNDDGVVSVLRLGPDGHLRRGTVGGAAXXXXXXXXXXXXQDADGPGDAAAGDAVXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXANGAGDGQAAAEAEGAGGEGVVEEDEGGEELGMGQVAVELVAVLDPLSVAAQRASTLLSLAQEVLGLPVTLLLLPSLDVSELPLKNFYRLVLGPASGSVAAFDRLPARDILTQRLDTPEPWNVQASAALQDLDN 588
BLAST of mRNA_Ecto-sp13_S_contig12540.2105.1 vs. uniprot
Match: A0A835Z7N5_9STRA (Nucleotide-diphospho-sugar transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7N5_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.770e-20 Identity = 62/104 (59.62%), Postives = 75/104 (72.12%), Query Frame = 1
Query: 1060 VELVAVLDPLSVAAQRASTLLSLAQEVLGLPVTLLLLPSLDVSELPLKNFYRLVLG-----PASGSVAAFYRLPTRDILTQRLDTPEPWNVQ--ASAALQDLDN 1350
+ +VA+LDPLS+AAQRASTLL +A +G+ VTL+LLP+L+ S+LPLK+FYRL LG AAF RLP R ILTQR+D P WNVQ ASA QDLDN
Sbjct: 1 MRVVALLDPLSIAAQRASTLLRIATHTIGVRVTLVLLPALEPSDLPLKSFYRLALGGXXXXXXXXXTAAFTRLPRRHILTQRVDAPPAWNVQRAASATRQDLDN 104
BLAST of mRNA_Ecto-sp13_S_contig12540.2105.1 vs. uniprot
Match: A0A7S2S3P5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3P5_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.940e-15 Identity = 54/105 (51.43%), Postives = 69/105 (65.71%), Query Frame = 1
Query: 1045 MGQVAVELVAVLDPLSVAAQRASTLLSLAQEVLGLPVTLLLLPSLDVSELPLKNFYRLVLGPASGSVA---AFYRLPTRDILTQRLDTPEPWNVQASAALQDLDN 1350
+G VAV LV LDPL+ AAQR + LL + ++ L +P+ LLLLP ++ SE PL+ FYR V+ VA F LP ILT R+D PEPWNVQ+S LQD+DN
Sbjct: 60 LGTVAVTLV--LDPLTEAAQRVAPLLLVLRDQLKVPLRLLLLPEMEYSEFPLQKFYRYVVTSDLSDVAPRAVFRDLPKHQILTMRMDVPEPWNVQSSWTLQDVDN 162
BLAST of mRNA_Ecto-sp13_S_contig12540.2105.1 vs. uniprot
Match: A0A7S2AIV0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AIV0_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 2.900e-15 Identity = 50/101 (49.50%), Postives = 68/101 (67.33%), Query Frame = 1
Query: 1057 AVELVAVLDPLSVAAQRASTLLSLAQEVLGLPVTLLLLPSLDVSELPLKNFYRLVLGPASGSV---AAFYRLPTRDILTQRLDTPEPWNVQASAALQDLDN 1350
+V + AVLDPL+ AAQRA+ LL + ++ L +P+ L L P + +SE PL+ FYR V+G V A F LP ILT R+DTPEPWNVQ++ +QD+DN
Sbjct: 1047 SVVVTAVLDPLTEAAQRAAPLLMVLRDQLQVPIRLFLTPEIHMSEFPLQKFYRYVVGADVEDVTPRAIFEDLPRSHILTMRMDTPEPWNVQSAMTVQDVDN 1147
BLAST of mRNA_Ecto-sp13_S_contig12540.2105.1 vs. uniprot
Match: A0A6G0WTR9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WTR9_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 3.800e-15 Identity = 48/99 (48.48%), Postives = 63/99 (63.64%), Query Frame = 1
Query: 1054 VAVELVAVLDPLSVAAQRASTLLSLAQEVLGLPVTLLLLPSLDVSELPLKNFYRLVLGPASGSVAAFYRLPTRDILTQRLDTPEPWNVQASAALQDLDN 1350
V +++VA LDPLS AQRAS +L + + VLG +TL+LLPS D E PLK FYR + G + F LP + +LT L+TPE WNVQ + D+DN
Sbjct: 971 VIMDIVAYLDPLSETAQRASGILRMLESVLGAKITLVLLPSHDYEEFPLKRFYRFLWGKGATQTIHFNNLPRQPVLTMNLETPESWNVQMIKSDTDVDN 1069
BLAST of mRNA_Ecto-sp13_S_contig12540.2105.1 vs. uniprot
Match: W7T4Y1_9STRA (Glycoprotein glucosyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4Y1_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 8.760e-13 Identity = 44/97 (45.36%), Postives = 61/97 (62.89%), Query Frame = 1
Query: 1060 VELVAVLDPLSVAAQRASTLLSLAQEVLGLPVTLLLLPSLDVSELPLKNFYRLVLGPASGSVAAFYRLPTRDILTQRLDTPEPWNVQASAALQDLDN 1350
+ + +LDPL AAQR + +L+ ++ LP+ +LL P ++SE PLK++YR L P + F LP +LT R+DTPE WNVQ ALQDLDN
Sbjct: 1190 LSVTVLLDPLGEAAQRLAPILTTLRDHFHLPLRVLLAPHPELSEFPLKSYYRFALFPTRETHVLFQSLPPSLVLTTRVDTPEAWNVQTRQALQDLDN 1286
BLAST of mRNA_Ecto-sp13_S_contig12540.2105.1 vs. uniprot
Match: A0A7S1CJ78_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CJ78_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.060e-12 Identity = 42/78 (53.85%), Postives = 54/78 (69.23%), Query Frame = 1
Query: 1117 LLSLAQEVLGLPVTLLLLPSLDVSELPLKNFYRLVLGPASGSVAAFYRLPTRDILTQRLDTPEPWNVQASAALQDLDN 1350
LL + ++ LG V + L+PS D+SELPLK+FYR V G S S A F RLP + +LT ++ TPEPW VQA+ A DLDN
Sbjct: 3 LLLMLRDELGARVRVQLMPSSDISELPLKSFYRFVAGAGSKSQALFSRLPPQ-LLTMKIQTPEPWIVQATTAPYDLDN 79
BLAST of mRNA_Ecto-sp13_S_contig12540.2105.1 vs. uniprot
Match: A0A8J4AWG6_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AWG6_9CHLO) HSP 1 Score: 79.3 bits (194), Expect = 6.370e-12 Identity = 48/101 (47.52%), Postives = 62/101 (61.39%), Query Frame = 1
Query: 1072 AVLDPLSVAAQRASTLLSLAQEVLGLPVTLLLLPSLDVSELPLKNFYRLVL--------GPASGSVAAFYRLPTRDILTQRLDTPEPWNVQASAALQDLDN 1350
AVL+PLS AQR + +L L +E LG ++L L P D++E+PLK++YR L GP A F RLP R +LT LD PE W V+ +AAL DLDN
Sbjct: 1144 AVLNPLSRPAQRLTAVLLLLREALGPSMSLTLNPQRDITEMPLKSYYRYALPTGLALGGGPPGPPTAYFSRLPGRRVLTLNLDAPEAWLVEPAAALYDLDN 1244
BLAST of mRNA_Ecto-sp13_S_contig12540.2105.1 vs. uniprot
Match: A0A1Z5JWC0_FISSO (UDP-glucose:glycoprotein glucosyltransferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWC0_FISSO) HSP 1 Score: 79.0 bits (193), Expect = 8.260e-12 Identity = 54/105 (51.43%), Postives = 68/105 (64.76%), Query Frame = 1
Query: 1060 VELVAVLDPLSVAAQRASTLLSLAQEVLGLPVTLLLLPS--LD-VSELPLKNFYRLVLGPASGS-----VAAFYRLPTRDILTQRLDTPEPWNVQASAALQDLDN 1350
V L AVLDPLS AAQR S++L +A++ L L + L+LLP LD S++PL ++YR V S S VA+F LP LT R+D PEPW+VQ S ALQD DN
Sbjct: 1030 VHLGAVLDPLSEAAQRLSSILLIARDHLRLAIDLVLLPKSVLDNESKIPLTSYYRFVADHRSFSNSENPVASFTNLPETHTLTVRMDVPEPWDVQQSWALQDTDN 1134 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12540.2105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12540.2105.1 >prot_Ecto-sp13_S_contig12540.2105.1 ID=prot_Ecto-sp13_S_contig12540.2105.1|Name=mRNA_Ecto-sp13_S_contig12540.2105.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=450bp KSPRFLLSVTRAVMSPPGPDGRGNNAANTVETLAREAGLSPSLRAAVTKAback to top mRNA from alignment at Ecto-sp13_S_contig12540:150..5018+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12540.2105.1 ID=mRNA_Ecto-sp13_S_contig12540.2105.1|Name=mRNA_Ecto-sp13_S_contig12540.2105.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4869bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12540:150..5018+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12540:150..5018+ >mRNA_Ecto-sp13_S_contig12540.2105.1 ID=mRNA_Ecto-sp13_S_contig12540.2105.1|Name=mRNA_Ecto-sp13_S_contig12540.2105.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1350bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12540:150..5018+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |