prot_Ecto-sp13_S_contig12539.2103.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12539.2103.1
Unique Nameprot_Ecto-sp13_S_contig12539.2103.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length500
Homology
BLAST of mRNA_Ecto-sp13_S_contig12539.2103.1 vs. uniprot
Match: A0A6H5KQY7_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY7_9PHAE)

HSP 1 Score: 811 bits (2095), Expect = 4.370e-287
Identity = 436/500 (87.20%), Postives = 446/500 (89.20%), Query Frame = 0
Query:    1 MSLAVRDVTHCRWRRYLVRLAVSLLLALPPSWSFKPTTTVTSKPSHHRKQQXXXXHQQPRATPNRRRCAHAHSMQCTAATLAVCRSAVFDNADNFEDDVGTAAPALAATPPRRGVXXXXXXXXXXXXXXXXXXXXXXXXXDSIVVLSDWLDESQAALGLPGLPGLGNREEHLNQGLVEVIGSQPNGDDEDGVGDGSAPFRFQQLIQQVWATLSRGNQLEYLGKEGKAKVKQALSVLAAYSALREHPLQTGVENPQQAFSEMDFNSDGEVSFDEFVRWYSMSTALDEKPQQVPMQADVGPASARSSNGDVAAPEVALTRSKTLLSTGSRLLADVEQSLALTRRQLGNMPAADKLPCSAAALPTDGGPKDNVGAAAPSPGKAWLGLSAAPTAXXXXXXXXTEEEKEAARERWLSGAAAEPEAVGSGTDPVDDSATKDLEKASEMLRVLVRAHADVDTLVAALASCIIRNPMGRYNLEVIEEQFGPIIRGIVEDRLLLERLPQ 500
            MSL VRD  HCRWRRYLVRL VSLL+ALPPSWSFK TTTVTSKP HHRKQQ    HQQPRATPNRRRCAHA SMQCTA TLAVCRSAVFDNADNFEDDVGTAAP LA TPPRRGV                         DS+VVLSDWLDESQA LGL GLPGLGNREEHLNQGLVEV+GSQ  GDDEDGVGDGSAPFRFQQLIQQ+WATLSRG+QLEYLG EGKAKVKQALSVLAAYSALREHPLQTGVENPQQAFSEMDFN DGEVSFDEFVRWYSMSTALDEKPQQ+P+QADVGPASARSSNG +AAPEVAL+RSKTLLSTGSRLLADVEQSLALT RQLGNMPAADKLP SAAA+PTDGGP DNVGAAAPSPGKAWLGLSAA   XXXXXXXXTEEEKEAARERWLSGAAAEP AVGSGTDPVDDSATKDLEKA EMLRVLVRAHADVDTLVAALASCIIRNPMGRYNLEVIEEQFGPIIRGIVEDRLLLERLPQ
Sbjct:    1 MSLVVRDAAHCRWRRYLVRLTVSLLVALPPSWSFKATTTVTSKPLHHRKQQHQRQHQQPRATPNRRRCAHAQSMQCTAVTLAVCRSAVFDNADNFEDDVGTAAPPLAETPPRRGVYPTEGGGSSSRGGGAGVEVPTGGVKDSVVVLSDWLDESQAPLGLAGLPGLGNREEHLNQGLVEVVGSQAGGDDEDGVGDGSAPFRFQQLIQQMWATLSRGHQLEYLGNEGKAKVKQALSVLAAYSALREHPLQTGVENPQQAFSEMDFNRDGEVSFDEFVRWYSMSTALDEKPQQLPVQADVGPASARSSNGGIAAPEVALSRSKTLLSTGSRLLADVEQSLALTSRQLGNMPAADKLPFSAAAIPTDGGPNDNVGAAAPSPGKAWLGLSAAXXXXXXXXXXXTEEEKEAARERWLSGAAAEPGAVGSGTDPVDDSATKDLEKALEMLRVLVRAHADVDTLVAALASCIIRNPMGRYNLEVIEEQFGPIIRGIVEDRLLLERLPQ 500          
BLAST of mRNA_Ecto-sp13_S_contig12539.2103.1 vs. uniprot
Match: D7G573_ECTSI (GTP diphosphokinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G573_ECTSI)

HSP 1 Score: 681 bits (1757), Expect = 7.600e-236
Identity = 383/427 (89.70%), Postives = 390/427 (91.33%), Query Frame = 0
Query:   74 MQCTAATLAVCRSAVFDNADNFEDDVGTAAPALAATPPRRGVXXXXXXXXXXXXXXXXXXXXXXXXXDSIVVLSDWLDESQAALGLPGLPGLGNREEHLNQGLVEVIGSQPNGDDEDGVGDGSAPFRFQQLIQQVWATLSRGNQLEYLGKEGKAKVKQALSVLAAYSALREHPLQTGVENPQQAFSEMDFNSDGEVSFDEFVRWYSMSTALDEKPQQVPMQADVGPASARSSNGDVAAPEVALTRSKTLLSTGSRLLADVEQSLALTRRQLGNMPAADKLPCSAAALPTDGGPKDNVGAAAPSPGKAWLGLSAAPTAXXXXXXXXTEEEKEAARERWLSGAAAEPEAVGSGTDPVDDSATKDLEKASEMLRVLVRAHADVDTLVAALASCIIRNPMGRYNLEVIEEQFGPIIRGIVEDRLLLERLPQ 500
            MQCTA TLAVCRSA FD ADNFED+VGTAAP LA TPPRRGV    XXXXXXXXXXX          DS+VVLSDWLDESQA+LGLPGLPGLGNREEHLNQGLVEV+GSQ NGDDEDGVGDGSAPFRFQQLIQQ+WATLSRGNQLEYLGKEGKAKVKQALSVLAAYSALREHPLQTGVENPQQAFSEMDFNSDGEVSFDEFVRWYSMSTALDEKPQQ+P QA+VGPASARS NG V APEVALTRSKTLLSTGSRLL DVEQSLALT RQL NMPAADK P SAAA PTDGGP  NVGAAAPSPGKAWLGLSAAP  XXXXXXXXTEEEKEAARERWLSGAAAEP AVGSGTDPVDDSA KDLEKA EMLRVLVRAHADVDTLVAALASCIIRNPMGRYNLEVIEEQFGPIIRGIVEDRLLLERLPQ
Sbjct:    1 MQCTAVTLAVCRSAAFDKADNFEDEVGTAAPPLAETPPRRGVSPAEXXXXXXXXXXXGVEGPTDDVEDSVVVLSDWLDESQASLGLPGLPGLGNREEHLNQGLVEVVGSQANGDDEDGVGDGSAPFRFQQLIQQMWATLSRGNQLEYLGKEGKAKVKQALSVLAAYSALREHPLQTGVENPQQAFSEMDFNSDGEVSFDEFVRWYSMSTALDEKPQQLPEQANVGPASARSGNGGVTAPEVALTRSKTLLSTGSRLLVDVEQSLALTSRQLTNMPAADKSPRSAAAPPTDGGPNHNVGAAAPSPGKAWLGLSAAPXXXXXXXXXXTEEEKEAARERWLSGAAAEPGAVGSGTDPVDDSAAKDLEKALEMLRVLVRAHADVDTLVAALASCIIRNPMGRYNLEVIEEQFGPIIRGIVEDRLLLERLPQ 427          
BLAST of mRNA_Ecto-sp13_S_contig12539.2103.1 vs. uniprot
Match: A0A835YJV9_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJV9_9STRA)

HSP 1 Score: 141 bits (356), Expect = 4.160e-32
Identity = 122/365 (33.42%), Postives = 166/365 (45.48%), Query Frame = 0
Query:  196 SAPFRFQQLIQQVWATLSRGNQLEYLGKEGKAKVKQALSVLAAYSALREHPLQTGVENPQQAFSEMDFNSDGEVSFDEFVRWYSMSTALDEKPQQVPMQADVGPASARSSNGDVAAPEVALTRSKTLLSTGSRLL--------------------------------ADVEQSLALTRRQLGNMPAADKLPCSAAALPTDGGPKDNVGAAAPSPGKAWLGL----------SAAPTAXXXXXXXXTE----EEKEAARERWLSGAAAEPEAVGSGTDPVDD--SATKDLEKASEMLRVLVRAHADVDTLVAALASC------------IIRNPMGRYNLEVIEEQFGPIIRGIVEDRLLLERLPQ 500
            SAPFRFQ+LI  +W  L +G  LEYLG EG+A+VK+A+ VLAA +ALREHP + GV +P++ F+EMDF+S+GEV+F+EFVRWY  S       ++    A + PA  R  +   +                                                    + V Q      RQ+ ++  A   P +A       G   + GA A    +AW G           SA  +          E     EKE  R RWLSG                     T  L+ + E++++LV   AD DT+VAALA              +I  P+G YNLEVIEEQFGP++RGIVEDR+LL+ L +
Sbjct:  107 SAPFRFQRLISAMWRELRKGGALEYLGSEGQARVKRAMIVLAAMAALREHPRRDGVLSPKKIFAEMDFDSNGEVTFEEFVRWYEGSA------RRGAAAAALSPARLRGRDTGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVFQGADQLWRQVQDLEPA---PVAAGNRNDPAGSDRSAGAGA----EAWWGRGPDAGARASGSAGGSGQLVQGSSAQEGFAAREKERLRARWLSGGGEXXXXXXXXXXXXXXXXGVTDGLQHSLEVVKILVGMEADADTIVAALACSSAQRPQMAQDRGLIGGPIGPYNLEVIEEQFGPVVRGIVEDRVLLDSLAE 458          
BLAST of mRNA_Ecto-sp13_S_contig12539.2103.1 vs. uniprot
Match: A0A7S4DFJ0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DFJ0_HETAK)

HSP 1 Score: 83.2 bits (204), Expect = 1.220e-14
Identity = 50/145 (34.48%), Postives = 78/145 (53.79%), Query Frame = 0
Query:  141 DSIVVLSDWLDESQA-ALGLPGLPG-LGNREEHLNQGLVEVIGSQPNGDDEDGVGDGSAPFRFQQLIQQVWATLSRGNQLEYLGKEGKAKVKQALSVLAAYSALREHPLQT--GVENPQQAFSEMDFNSDGEVSFDEFVRWYSMS 281
            + +VVL+DWLDE  A +  LP     LG         L +V                  P +F+++++ +W  L+   +L+YL +  +A +K+AL+V+ A+S+L EHP  T     NP QA+ E D N DG+++F+EF RWY  S
Sbjct:   73 EQVVVLTDWLDEDDADSQELPSSSSALGFARYQDENDLADV------------------PQKFKRMVKDMWEELTSEGELDYLSEAEQALIKKALAVITAFSSLNEHPAYTYGTSRNPFQAYQEADANGDGDLTFEEFDRWYRAS 199          
BLAST of mRNA_Ecto-sp13_S_contig12539.2103.1 vs. uniprot
Match: A0A4D9D784_9STRA (EF-hand domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D784_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 8.430e-11
Identity = 43/123 (34.96%), Postives = 66/123 (53.66%), Query Frame = 0
Query:  160 PGLPGLGNREEHLNQGLVEVIGSQPNGDDEDGVGDGSAPFRFQQLIQQVWATLSRGNQLEYLGKEGKAKVKQALSVLAAYSALREHPLQT-GVENPQQAFSEMDFNSDGEVSFDEFVRWYSMS 281
            PG  G+G+     N GL        +   +DG      P R Q+ +  VW  + RG+++ YL  E + +VKQ L VLA +  L +HP Q    ++ +  F + D N DG++SF+EF+RWY+ S
Sbjct:  130 PGDSGMGHSTRPPN-GLFTTALGLSSATHDDGQAAQQLPVRLQREVNLVWYEIQRGDRMAYLRAEERERVKQQLVVLAFFRTLFDHPSQVLNTQSAEACFQQADVNRDGQLSFEEFLRWYTAS 251          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12539.2103.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KQY7_9PHAE4.370e-28787.20EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D7G573_ECTSI7.600e-23689.70GTP diphosphokinase n=1 Tax=Ectocarpus siliculosus... [more]
A0A835YJV9_9STRA4.160e-3233.42EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S4DFJ0_HETAK1.220e-1434.48Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9D784_9STRA8.430e-1134.96EF-hand domain-containing protein n=2 Tax=Monodops... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 229..293
e-value: 3.6E-6
score: 28.6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..500
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..33
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..33
score: 0.668
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 262..274
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 249..284
score: 11.473
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 244..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12539contigEcto-sp13_S_contig12539:2990..5019 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12539.2103.1mRNA_Ecto-sp13_S_contig12539.2103.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12539 2990..5019 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12539.2103.1 ID=prot_Ecto-sp13_S_contig12539.2103.1|Name=mRNA_Ecto-sp13_S_contig12539.2103.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=500bp
MSLAVRDVTHCRWRRYLVRLAVSLLLALPPSWSFKPTTTVTSKPSHHRKQ
QRQRQHQQPRATPNRRRCAHAHSMQCTAATLAVCRSAVFDNADNFEDDVG
TAAPALAATPPRRGVSPAEGGGSNSRGGGAGVEGPTGGVEDSIVVLSDWL
DESQAALGLPGLPGLGNREEHLNQGLVEVIGSQPNGDDEDGVGDGSAPFR
FQQLIQQVWATLSRGNQLEYLGKEGKAKVKQALSVLAAYSALREHPLQTG
VENPQQAFSEMDFNSDGEVSFDEFVRWYSMSTALDEKPQQVPMQADVGPA
SARSSNGDVAAPEVALTRSKTLLSTGSRLLADVEQSLALTRRQLGNMPAA
DKLPCSAAALPTDGGPKDNVGAAAPSPGKAWLGLSAAPTATAGAGLGVTE
EEKEAARERWLSGAAAEPEAVGSGTDPVDDSATKDLEKASEMLRVLVRAH
ADVDTLVAALASCIIRNPMGRYNLEVIEEQFGPIIRGIVEDRLLLERLPQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair