mRNA_Ecto-sp13_S_contig12538.2101.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12538.2101.1
Unique NamemRNA_Ecto-sp13_S_contig12538.2101.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig12538.2101.1 vs. uniprot
Match: D7FNA9_ECTSI (Tyrosine Transport protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA9_ECTSI)

HSP 1 Score: 409 bits (1052), Expect = 1.090e-140
Identity = 219/225 (97.33%), Postives = 221/225 (98.22%), Query Frame = 1
Query:    1 SGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLVMMWVYMVSTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGIAALPEWAGPVAFCLALGGLVLFFSEEFVASVNSVLVGVVLLSFFCLVGVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEGE 675
            SGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLVMMW YMV TALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGIAALPEWA PVAFCLALGGLVLFF+EEFVASVNSVLVGVVLLSFF LVGVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEG+
Sbjct:   14 SGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLVMMWAYMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGIAALPEWASPVAFCLALGGLVLFFTEEFVASVNSVLVGVVLLSFFGLVGVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEGD 238          
BLAST of mRNA_Ecto-sp13_S_contig12538.2101.1 vs. uniprot
Match: A0A835YVI2_9STRA (Tryptophan/tyrosine permease family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVI2_9STRA)

HSP 1 Score: 237 bits (604), Expect = 7.590e-71
Identity = 130/223 (58.30%), Postives = 161/223 (72.20%), Query Frame = 1
Query:    7 FKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLVMMWVYMVSTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGIAALPEWAGPVAFCLALGGLVLFFSEEFVASVNSVLVGVVLLSFFCLVGVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEGE 675
            FKRK T+LL A +L+ GT VGAG+LALPAAT+QAGL+PS++ LV +WVYMV T LLIAEVNVN+IC +G PG+GL+ALAE+ LGK GAR  GL+YVFIHY+LLVAYMAQGGELLA          G G A    W GPVAF    GG +   SE+ +  VN+ LV VVL SF  L+    GG++  YLA  DWS +    PV+ +A+V+HNV+PV+TTQLEG+
Sbjct:   40 FKRKSTSLLGATALVGGTTVGAGVLALPAATIQAGLVPSSLVLVGVWVYMVCTGLLIAEVNVNLICREGQPGLGLLALAERTLGKIGARAAGLLYVFIHYALLVAYMAQGGELLARFVLG--GDPGDGAA----WVGPVAFATLWGGGMALGSEKLIEGVNNALVAVVLASFALLLVSAGGGIKHEYLAHNDWSTVLQAAPVMLVALVYHNVVPVITTQLEGD 256          
BLAST of mRNA_Ecto-sp13_S_contig12538.2101.1 vs. uniprot
Match: A0A6V1NZW3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NZW3_HETAK)

HSP 1 Score: 211 bits (536), Expect = 1.500e-62
Identity = 109/224 (48.66%), Postives = 155/224 (69.20%), Query Frame = 1
Query:    4 GFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLVMMWVYMVSTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGIAALPEWAGPVAFCLALGGLVLFFSEEFVASVNSVLVGVVLLSFFCLVGVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEGE 675
            GF+RK  ++L A +L+AGT VGAG+LALPAAT   G++PS++ L+ MW YMV++ LL+AE N+N++  +G   +GL+A+AE+ LG+ G R  G  Y+FIHY LLVAY+AQGG LLA+              +LPE+ GPV FC   GGL+ F SE  + SVN+V V +V+ SF  L+ + + G++++ L  +DWS  P  VPV F+A+VFHNV+PV+ TQLE +
Sbjct:   56 GFQRKEGSVLGATALVAGTTVGAGVLALPAATASTGVIPSSIILLGMWAYMVASGLLLAETNLNLVVREGRVNLGLLAVAERTLGRAGGRAAGAAYLFIHYCLLVAYLAQGGALLADLLLP------GQQQSLPEYLGPVGFCAIFGGLLAFGSEALIESVNNVFVTIVITSFLGLLVLATPGIEISRLFVEDWSAAPGVVPVTFVALVFHNVVPVIVTQLEAD 273          
BLAST of mRNA_Ecto-sp13_S_contig12538.2101.1 vs. uniprot
Match: A0A7S2V4P3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4P3_9STRA)

HSP 1 Score: 209 bits (532), Expect = 3.290e-61
Identity = 113/222 (50.90%), Postives = 152/222 (68.47%), Query Frame = 1
Query:   10 KRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLVMMWVYMVSTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGIAALPEWAGPVAFCLALGGLVLFFSEEFVASVNSVLVGVVLLSFFCLVGVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEGE 675
            +R   ++L+A SL+AGT VGAGILALPAAT+ +G++PS   L+ MWVYMV++ LLIAEV++     +G  G+GL+ +AE+ LG+ G+RF G VYV +HY LLVAYMAQGG + A     + +        LP WAGPV F  A GGL+   SE+ V SVN+  V VVLLSF  L+ V   GV+   L +QDWS+    +PV+F+A+VFHN++PV+ TQLEG 
Sbjct:  129 ERDEGSVLAATSLVAGTCVGAGILALPAATVSSGVIPSTTLLLGMWVYMVASGLLIAEVSLTRTLREGQTGLGLLVMAEKTLGRAGSRFAGTVYVGLHYCLLVAYMAQGGGIAAAGIRDLTSLP------LPSWAGPVGFATAFGGLLALGSEKLVESVNNAFVAVVLLSFVGLLTVAVPGVRAERLLDQDWSQAYEMIPVMFVALVFHNIVPVIATQLEGN 344          
BLAST of mRNA_Ecto-sp13_S_contig12538.2101.1 vs. uniprot
Match: A0A1Z4IEU0_9NOSO (Aromatic amino acid permease n=3 Tax=unclassified Nostoc TaxID=2593658 RepID=A0A1Z4IEU0_9NOSO)

HSP 1 Score: 194 bits (493), Expect = 1.360e-56
Identity = 102/220 (46.36%), Postives = 151/220 (68.64%), Query Frame = 1
Query:   16 KPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLVMMWVYMVSTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGIAALPEWAGPVAFCLALGGLVLFFSEEFVASVNSVLVGVVLLSFFCLVGVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEGE 675
            +P ++L + +LIAGT VGAGILALPA T+ +G++PS V L+ +W+Y + + LLIAEV++N I  +G   VGL+A+ ++ LGK GAR  G  Y+F+HY+LLVAY+ QGG++L  +F  V+     GI+A+P W G   F L  G ++ F  E+F+  +NS  V +V+ SFF L+ +G+G V+      QDWS + S V V+ +A+ +HNV+PVV TQLEG+
Sbjct:   23 QPGSVLGSTALIAGTTVGAGILALPAVTMPSGIVPSTVLLIAIWLYALISGLLIAEVSLNSIRIEGRLSVGLLAMVKRTLGKLGARIAGGAYLFLHYALLVAYVTQGGDILISAFAQVW-----GISAMPTWLGGTVFTLLFGSILYFGREKFIEKLNSAFVAIVITSFFGLLLLGAGQVKSGQFLVQDWSAVGSAVSVMLVALFYHNVVPVVVTQLEGD 237          
BLAST of mRNA_Ecto-sp13_S_contig12538.2101.1 vs. uniprot
Match: A0A1Z4INN3_9CYAN (Aromatic amino acid permease n=4 Tax=Nostocales TaxID=1161 RepID=A0A1Z4INN3_9CYAN)

HSP 1 Score: 194 bits (492), Expect = 3.050e-56
Identity = 104/225 (46.22%), Postives = 147/225 (65.33%), Query Frame = 1
Query:    1 SGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLVMMWVYMVSTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGIAALPEWAGPVAFCLALGGLVLFFSEEFVASVNSVLVGVVLLSFFCLVGVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEGE 675
            S    +P ++L + +LIAGT VGAGILALPA TL +G++PS V L+ +W+Y + + LLIAEV +N +   G P +GL+A+ E+ LGK GARF G  Y+F+HY+LLVAY+AQGGE+L  +   V          LP W G  AF L  GG++    E FV  +NS  V +VL SF  L+ +G+  ++ +  + Q+WS LP  V V+F+A+ +HNV+P V TQLEG+
Sbjct:   24 SKLSHQPGSILGSTALIAGTTVGAGILALPAVTLPSGVVPSTVLLIAVWLYALVSGLLIAEVTLNTMRLVGRPSLGLLAMIERTLGKLGARFAGGAYLFLHYALLVAYVAQGGEILVSAVEKVLGVQN----VLPAWVGTTAFTLLFGGIMYLGRERFVEKLNSAFVAIVLASFLGLLLLGTTQLKTSSFSFQNWSALPGAVSVMFVALFYHNVVPTVVTQLEGD 244          
BLAST of mRNA_Ecto-sp13_S_contig12538.2101.1 vs. uniprot
Match: A0A0G4F457_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F457_VITBC)

HSP 1 Score: 194 bits (494), Expect = 7.150e-56
Identity = 106/224 (47.32%), Postives = 150/224 (66.96%), Query Frame = 1
Query:    7 FKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLVMMWVYMVSTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGI-AALPEWAGPVAFCLALGGLVLFFSEEFVASVNSVLVGVVLLSFFCLVGVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEGE 675
            F+R+  + L A SL+AGT VGAGILALPA TL +G++PS++ L++ WVYMV++ LLIAEVN+N  C+ G   + L+++AEQ +GK G+R +GL YVFIHY+LLVAYMAQGGE+L  +   +     +G+   LP+      F +  GG +   S  FV  VN+V V VV+ SF  L+ + S  V  + L   DW  +   +PV+F+A+V+HNV+PV+ TQLEG 
Sbjct:   95 FERREGSELGATSLVAGTTVGAGILALPAVTLPSGVIPSSLTLILCWVYMVASGLLIAEVNLNTCCNLGQANLSLLSMAEQTIGKWGSRLSGLAYVFIHYALLVAYMAQGGEILGVAIQKL-----TGMDEPLPQPVEAATFAVLFGGFLFLGSPGFVEKVNNVFVLVVITSFLGLLTLASTQVDPSALLRTDWKSVAPAIPVMFVALVYHNVVPVICTQLEGS 313          
BLAST of mRNA_Ecto-sp13_S_contig12538.2101.1 vs. uniprot
Match: UPI00182C3A7A (Tyrosine transporter n=1 Tax=Anabaena sp. TaxID=1167 RepID=UPI00182C3A7A)

HSP 1 Score: 192 bits (487), Expect = 1.190e-55
Identity = 103/226 (45.58%), Postives = 152/226 (67.26%), Query Frame = 1
Query:    1 SGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLVMMWVYMVSTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGIAA-LPEWAGPVAFCLALGGLVLFFSEEFVASVNSVLVGVVLLSFFCLVGVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEGE 675
            S    +P ++L + +L+AGT VGAGILALPA TL +G++PS V L+++W+Y + + LLIAEV++N + S+G   VGL+A+ E  LGK GAR  G  Y+F+HY+LLVAY+AQGGE+L  +   V     SGI+   P W G   F L  GG++ +  E+F+  +NS  V +VL++F  L+ +G+G ++      QDWS L S V V+ +A+ +HN++PVV TQLEG+
Sbjct:   19 SKLTHQPGSVLGSTALVAGTTVGAGILALPAVTLPSGIVPSTVLLIVVWLYALVSGLLIAEVSLNTMRSEGRLSVGLLAMVENTLGKLGARIAGSAYLFLHYALLVAYVAQGGEILISALTKV-----SGISHHWPGWVGTTTFTLVFGGIMYWGREQFIEKLNSAFVAIVLVAFLGLLLLGTGQIKSVQFLFQDWSALGSAVSVMLVALFYHNIVPVVVTQLEGD 239          
BLAST of mRNA_Ecto-sp13_S_contig12538.2101.1 vs. uniprot
Match: A0A8J7DHV4_9CYAN (Tyrosine transporter n=4 Tax=Nostocales TaxID=1161 RepID=A0A8J7DHV4_9CYAN)

HSP 1 Score: 191 bits (484), Expect = 4.390e-55
Identity = 100/223 (44.84%), Postives = 145/223 (65.02%), Query Frame = 1
Query:    7 FKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLVMMWVYMVSTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGIAALPEWAGPVAFCLALGGLVLFFSEEFVASVNSVLVGVVLLSFFCLVGVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEGE 675
               +P ++L + +LIAGT VGAGILALPA TL +G+LPS   L+ +W+Y + + LLIAEV +N +  +G P VGL+A+ ++ LGK GAR  G  Y+F+HY+LLVAY+ QGGE+L  +   ++         LP W G   F L  GG++    E+F+  +NS  VG+V++SF  L+ +G G V+      Q+WS L S V V+ +A+ +HNV+PVV TQLEG+
Sbjct:   26 LNHQPGSVLGSTALIAGTTVGAGILALPAVTLPSGILPSTALLIAVWLYALVSGLLIAEVTLNAMHLEGRPSVGLLAIVQKTLGKQGARIAGGAYLFMHYALLVAYITQGGEILVSAIAKIWGVQN----VLPTWVGTTTFTLLFGGIMYVGREKFIEKLNSAFVGIVIISFLGLLLLGGGQVKSAQFLFQNWSALGSAVSVMCVALFYHNVVPVVVTQLEGD 244          
BLAST of mRNA_Ecto-sp13_S_contig12538.2101.1 vs. uniprot
Match: A0A1Y0RWL6_9CYAN (Tyrosine transporter n=1 Tax=Nostocales cyanobacterium HT-58-2 TaxID=1940762 RepID=A0A1Y0RWL6_9CYAN)

HSP 1 Score: 190 bits (482), Expect = 6.160e-55
Identity = 102/223 (45.74%), Postives = 145/223 (65.02%), Query Frame = 1
Query:    7 FKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLVMMWVYMVSTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGIAALPEWAGPVAFCLALGGLVLFFSEEFVASVNSVLVGVVLLSFFCLVGVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEGE 675
               +P ++L + +LIAGT VGAGILALPA TL +G++PS V LV +W+Y + + LLIAEV +N +   G P +GL+ + E+ LGK GAR  G  Y+F+HY+LLVAY+AQGGE+L  +   V          LP W G  AF L LGG++    E+F+  +N+  V +VL SF  L+ +G+   + +    QDWS LP+ V V+F+A+ +HNV+P V TQLEG+
Sbjct:   12 LSHQPGSVLGSTALIAGTTVGAGILALPAVTLPSGVVPSTVLLVAVWLYALVSGLLIAEVTLNTMRLVGRPSLGLLIMVEKTLGKLGARVAGSAYLFMHYALLVAYVAQGGEILVSAVEKVLGVENL----LPTWVGTTAFTLLLGGIMYLGREKFIEKLNNAFVAIVLASFLGLLLLGTTQFKTSSFFFQDWSALPAAVSVMFVALFYHNVVPTVVTQLEGD 230          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12538.2101.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNA9_ECTSI1.090e-14097.33Tyrosine Transport protein n=1 Tax=Ectocarpus sili... [more]
A0A835YVI2_9STRA7.590e-7158.30Tryptophan/tyrosine permease family-domain-contain... [more]
A0A6V1NZW3_HETAK1.500e-6248.66Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V4P3_9STRA3.290e-6150.90Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1Z4IEU0_9NOSO1.360e-5646.36Aromatic amino acid permease n=3 Tax=unclassified ... [more]
A0A1Z4INN3_9CYAN3.050e-5646.22Aromatic amino acid permease n=4 Tax=Nostocales Ta... [more]
A0A0G4F457_VITBC7.150e-5647.32Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
UPI00182C3A7A1.190e-5545.58Tyrosine transporter n=1 Tax=Anabaena sp. TaxID=11... [more]
A0A8J7DHV4_9CYAN4.390e-5544.84Tyrosine transporter n=4 Tax=Nostocales TaxID=1161... [more]
A0A1Y0RWL6_9CYAN6.160e-5545.74Tyrosine transporter n=1 Tax=Nostocales cyanobacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12538contigEcto-sp13_S_contig12538:3..4260 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score409.1
Seed ortholog evalue1.4e-111
Seed eggNOG ortholog2880.D7FNA9
Model size675
KEGG koko:K03834
KEGG TC2.A.42.1.1
Hectar predicted targeting categorysignal anchor
Exons5
EggNOG free text desc.Tryptophan/tyrosine permease family
EggNOG OGs2QSPD@2759,COG0814@1
Cds size675
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462668.3428771-CDS-Ecto-sp13_S_contig12538:2..1451681462668.3428771-CDS-Ecto-sp13_S_contig12538:2..145Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12538 3..145 +
1681462668.3525379-CDS-Ecto-sp13_S_contig12538:2689..27951681462668.3525379-CDS-Ecto-sp13_S_contig12538:2689..2795Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12538 2690..2795 +
1681462668.3631809-CDS-Ecto-sp13_S_contig12538:3026..31601681462668.3631809-CDS-Ecto-sp13_S_contig12538:3026..3160Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12538 3027..3160 +
1681462668.3711987-CDS-Ecto-sp13_S_contig12538:3528..36361681462668.3711987-CDS-Ecto-sp13_S_contig12538:3528..3636Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12538 3529..3636 +
1681462668.37907-CDS-Ecto-sp13_S_contig12538:4076..42601681462668.37907-CDS-Ecto-sp13_S_contig12538:4076..4260Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12538 4077..4260 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12538.2101.1prot_Ecto-sp13_S_contig12538.2101.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12538 3..4260 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12538.2101.1

>prot_Ecto-sp13_S_contig12538.2101.1 ID=prot_Ecto-sp13_S_contig12538.2101.1|Name=mRNA_Ecto-sp13_S_contig12538.2101.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=225bp
SGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLVMMWV
YMVSTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFI
HYSLLVAYMAQGGELLAESFNSVFATAGSGIAALPEWAGPVAFCLALGGL
VLFFSEEFVASVNSVLVGVVLLSFFCLVGVGSGGVQMNYLAEQDWSKLPS
TVPVLFIAMVFHNVIPVVTTQLEGE
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mRNA from alignment at Ecto-sp13_S_contig12538:3..4260+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12538.2101.1 ID=mRNA_Ecto-sp13_S_contig12538.2101.1|Name=mRNA_Ecto-sp13_S_contig12538.2101.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4258bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12538:3..4260+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGCGGGTTCAAGCGGAAGCCCACCAACCTGTTGAGTGCAGCCTCCCTGAT AGCGGGCACTGCGGTTGGTGCGGGCATACTTGCTCTTCCCGCGGCCACAC TTCAGGCCGGACTCTTGCCCAGCGCTGTCGGACTCGTCATGATGTGAGAA TAACAGCCCAGCACGCCCACGGCATGGGCCTTGTTTTTGTTCGTGTACCG CTGCGCATGCTTTTGTATTTGCTGGGAGTTCCAAAAACGATATTCATGAT TCGCAAGATCGAAAATTCCGAACCAGCTGCACGCGGCACACCGACGATCG TATGTAGATGTTTCCGGCGAGATCTTCAAGTACAACGCATCTCGACTTCC AAAGATAACGCATCTCCATCGCTTGGAATGGTTGCGCCCGGGCCTATTCT TGCGCCTTACAAGCAACTTGCAGGCCCTGTCGTGTTCAGATTGCTACCTC ATGATTGTATCCGAGAGGCAATAGGTAGCCCGATATAGTGGTAATCTGAA TAGTGAAATACCCGATATAGTGGCATGCAAATCCCTTGGCAAAATTTCAA CCCGGTATAGTGGTTCTTTCCCGCTATTGAGGACGGGGCCCTCAATAGTG GCATTTCGGGCCTTCCACGCACCCAATAGTGGCAGTTCCAAGTAGCGAGC ACCTACCACTGCTGTACCACACCTGCCCACACACCTTCAGCAGTGGGCGC CACACGTATCATGCAAGCCTGCGCGGACCTAGAACTATGTAAACTCCCAT ACCAACCACTGGGAGGGAACCACGGCGGGCACACATGTCGCTTTGGCTGC TGTGGGCTGCTTCATGGTATATGTGGTGAACCAGAGGAGGGCGGCAGCGG AGGAATGCACCGCGTCGGCAACCCGTGCGTCGCCAAGAAGAGGCGCCAGA AGCAGAAGCAACCCGAGAAGAAGAAGACGCCCGGCTCCTCGAATCAGCCT AAGCGTGCCTCGCCCGGCTCGGGATTTCTCCGAGATGGCGCCGCGGCCAA AAAAAAGAAGCCAGGCGACAAAGGGGGGCCGCGCAAGCGGCTCAACTTCG GCCAGCGCTTAGCATCGACGTGCGCGAAGCGGCGTCGGGGCCGGCGCCGG GCGTGCAGGATTCAGAGTTGTTAGAGGTTCTGGCGAAGCTTGACATCGCC CCTGGCACGCGTGCTCACCTCGGCGCCATCAAGGCCATGGAGGAATGGCT CGGGTTGGAGGAGCAACCCGAGTTTGCTGACTCTCTGTGTGAAGACGCAA AGGAGGTTTTCATGGAGAAGGTTAACATACGTACGAGGAGGAGGCGGACA GTGACAACGAGCCAGACAACGCCGAAGACTCTGAGAGCGCGGGGGGTGGG GGGGAGAAGGCGCCGCCGTCGTTCGCGGAACTGTCTTCGCTTTTTGGTCC TCTAGAACAGTACGCAGAGTCGTGTGGCCTTGGCGAGGCCGGGCATTTCC TCCGCAATGCTGAGATGGCATTCTTCGCAGCGCATGCCGTTAAACCGACG CGGCAGATGGACATCCGAGCGTTTACCGAGTAATAGAATCAGTCGGCTAA CGTCTGCAGCAGCAGTTGTAGAGCAAGGTGGCGGTGGGGGTTGATGCGCT GGGTTGGAGAGTGTTTGACTTTTGGTGACTTGGTTGCTCAAGTAGGTTCG CGTTTTTACTTGCATTTTTCATGAGTTTTAGGATGAAGAAAATGTTTGGC TCTAATAATGCGTTCGACGTGGTTCCTGCAGTCTCCCTCCACAGAAAGAT GGGTTTTGACCACAGAAGGCCCGGACCCCTCGATGATCAAGTGTAACTTG ATGCAATTCATGCGGGTACTGCTGCACACAAATGCTCAACCTCGAGGAGT GCAGCACTGCACGGCACTACCCTTACGTATATGTAGCGCGTAGGAGAGTA GATCCAATGAACCGCTGTCGAATCGTGCACATCAAATCTTCTTCTCCCGA TATAGTGGCAGAAGTATCAATATTGTCGGACAACAGTGGTACTTTTGCCA CTTTATCGGCTAGTGGTAAGTGCCCTGTATAGTGACATGTTGCCCTTTTG CCCCTGTATGCCACTATATCGGGCTGCCTACAGTACCGAAATTCTGCCCC CGGTCAGGTAAACATCAGCGGTGGCTGAGTGGTTCGGTCGATGCACTCCA AAACTTCCTCACTCTTGGTGTTATGAGTTCGAATGTCTTCAGAGTGGAAA AAAACGCAACCTACATGTACAAGTGAGATAAGGGTCGGTCGAAAATTCCA CAAACGAGGGAGGCCTGTTGAACGCTGCAGTGACAATTCAGCTGAACGCA AGCACCGAGGGAGGAACAGTGAACATTTCCTCCCGAATGCCTCTAGGCGG GGCACGAAAATAAACGAAGAGAAGAAAAAAGGCTCTTGTGGTGTTTACCC CCTCCTGTGTTACCCTTGATGGTTGTAGTTGTACGAAAAATACACTGGAA AGTGTAGTACTATACATACACTAAAGAGTGTTGTACACGTCTCACCACGA GAAATGGGGGGACTGTCGCCGCAAAAAATAGGGCCAAAACACACTCACAT ACATGCCTCGGCTGGCGCGTCAAACATGTACTGGCGCCGTGGAGTTCAGT GACACGAAAAACAATTACATGCACATGCACCTGCTGGATCCGATCTGCGA ACGATGGCTGATACCTGCTTTCCGACACCGTCGACAGGTGGGTGTACATG GTGAGCACGGCGTTGCTAATTGCGGAGGTGAACGTAAACGTCATCTGCTC CCAGGGCACGCCTGGAGTGGGCTTGATTGCCCTTGCAGAGCAGGTAACAA TATCGATGGCATCGCACTTGCTACCGGCGCTACGAGTGGGTTCCTGTTAT GAAAAATTAGGCCTCTCTCCTTCCCGCTTCTGCGGCAGACCCGGCTGCTT GTTTTGCCCAATGTTGCTCAACGAAGCGTCTGTCCTAGTTCTGTGCGTCT GTCAACCTCTCTGTCTGGTTGACTGTGTGCGTACGTGCTGGGGGCTCGGC CGGCATGCTCTCACTGCGTGACAGGCTTTGGGAAAGGGCGGCGCAAGGTT CACTGGCCTCGTGTACGTCTTCATCCACTACTCGTTGCTTGTGGCCTATA TGGCGCAGGGGGGTGAGCTTCTCGCCGAGAGCTTCAACAGTGTGTTCGCA ACCGCGGGGTAAGTGTGTGGGATCCTAGGTTTCGCGAGGAGTACTTCACC CCATGGTGTGCGTGAAAAGGGCGGTGACTATGACTGTTCGATTGCCACAG AGCCACGGATGCATATCGGCGCCTTGGTGCAGTCGTCATTGTTTGGTGGC CAGAGTTTGGAATGGAATGCGGATCCGAGCGATTCGTGAGGTTGGTTGCA ACACTGATTGTGTTTTCCACGGATCAGTTGGTTTCTGGGCTTGATCGGAA GACGTCCTTTGTCAACGGAAGCTTAACGGGCATGAAATACATCGCACCTC ATTATGTTCGTCTCACCCACGCTGTTGTTTGTCATTTTTTCGGTGACCGT CTTTGTCCTGTCTCGACGCCTTCAAGGTCAGGCATAGCGGCGTTGCCCGA GTGGGCTGGCCCTGTGGCCTTCTGCCTCGCCCTCGGTGGCTTGGTGCTAT TCTTCAGCGAGGAATTCGTGGCATCTGTCAACAGGTGTGGATTGTGCGTC TCTGATGCGTGTGACGTGTGGGTCTGGACATACCGCACGTTTGTGCGACC TGTTGCGGGTGTGATATACTCCATGGCATGGTACGCAATACTGCTGTACC CATCCCTTGTTGTTCACCCGATGTTTTCGTCGCTCGCTTTCCCCATATTT GTCCCTTCTTTTCTCTTTCCGAGTGTGCACCTCCTGTGGATCCGTCTCTC TCGGCAAATCCCATGTGTTTCGTGGTATTATTTTTGTTATCTTTCTTCCT TGGTGTCCCTCCTTCCCTCTGCCTGCCTGTCTCCTTCACGGAAAGACACA ACTCCGAAGCAGCATCGAATTTCGAGTTTCTGTGTGCGTTTTTTTCAGCT ACAAGTAAGAAAATCCGTTTCGATACAAAACTTCACCACTAAGCCCACTT GATTCTGTATTCTTCGCGATCCAGTGTCTTGGTGGGAGTGGTGCTCTTGT CGTTCTTTTGCTTAGTGGGGGTGGGAAGTGGGGGCGTCCAGATGAACTAC CTCGCCGAACAAGACTGGAGCAAGCTGCCCTCCACAGTGCCGGTGCTGTT CATCGCCATGGTGTTCCACAACGTTATTCCGGTCGTCACGACCCAGCTTG AAGGTGAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12538:3..4260+

>mRNA_Ecto-sp13_S_contig12538.2101.1 ID=mRNA_Ecto-sp13_S_contig12538.2101.1|Name=mRNA_Ecto-sp13_S_contig12538.2101.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=675bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12538:3..4260+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGCGGGTTCAAGCGGAAGCCCACCAACCTGTTGAGTGCAGCCTCCCTGAT
AGCGGGCACTGCGGTTGGTGCGGGCATACTTGCTCTTCCCGCGGCCACAC
TTCAGGCCGGACTCTTGCCCAGCGCTGTCGGACTCGTCATGATGTGGGTG
TACATGGTGAGCACGGCGTTGCTAATTGCGGAGGTGAACGTAAACGTCAT
CTGCTCCCAGGGCACGCCTGGAGTGGGCTTGATTGCCCTTGCAGAGCAGG
CTTTGGGAAAGGGCGGCGCAAGGTTCACTGGCCTCGTGTACGTCTTCATC
CACTACTCGTTGCTTGTGGCCTATATGGCGCAGGGGGGTGAGCTTCTCGC
CGAGAGCTTCAACAGTGTGTTCGCAACCGCGGGGTCAGGCATAGCGGCGT
TGCCCGAGTGGGCTGGCCCTGTGGCCTTCTGCCTCGCCCTCGGTGGCTTG
GTGCTATTCTTCAGCGAGGAATTCGTGGCATCTGTCAACAGTGTCTTGGT
GGGAGTGGTGCTCTTGTCGTTCTTTTGCTTAGTGGGGGTGGGAAGTGGGG
GCGTCCAGATGAACTACCTCGCCGAACAAGACTGGAGCAAGCTGCCCTCC
ACAGTGCCGGTGCTGTTCATCGCCATGGTGTTCCACAACGTTATTCCGGT
CGTCACGACCCAGCTTGAAGGTGAG
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