prot_Ecto-sp13_S_contig9353.20956.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9353.20956.1
Unique Nameprot_Ecto-sp13_S_contig9353.20956.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length145
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9353.20956.1 vs. uniprot
Match: D8LRI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRI0_ECTSI)

HSP 1 Score: 216 bits (549), Expect = 6.700e-70
Identity = 120/144 (83.33%), Postives = 126/144 (87.50%), Query Frame = 0 
Query:    1 MVIIMSGAVWAGIVVTKCVISKVLVWTALERCMWQDENREHETNSSDEEARDDGEDVPEEYAQEVDXXXXXXQQPVDGATKRTLGTLKQGSGRELTPREDRLQSESSTGDNSLDSRSDGSGEGDDYVPNSTMMMVTDYLFHFYV 144
            MVII+SGAVWAGI+VTKCVISKVLVW ALERC+  DENREH+TNSSDEEARDDGEDVPE  AQEVD      QQPV GATKRTLGTLKQG GRE T R DRLQ ESSTGDNSLDSRSDGSGEG DYVP+STMMMVTD+LFHFYV
Sbjct:    1 MVIIVSGAVWAGIMVTKCVISKVLVWKALERCVRPDENREHKTNSSDEEARDDGEDVPE-LAQEVDDEEEEDQQPVIGATKRTLGTLKQGDGREPTSRVDRLQPESSTGDNSLDSRSDGSGEGGDYVPDSTMMMVTDFLFHFYV 143
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9353.20956.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRI0_ECTSI6.700e-7083.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9353contigEcto-sp13_S_contig9353:4174..5376 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9353.20956.1mRNA_Ecto-sp13_S_contig9353.20956.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9353 4174..5376 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9353.20956.1 ID=prot_Ecto-sp13_S_contig9353.20956.1|Name=mRNA_Ecto-sp13_S_contig9353.20956.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=145bp
MVIIMSGAVWAGIVVTKCVISKVLVWTALERCMWQDENREHETNSSDEEA
RDDGEDVPEEYAQEVDDDEEEDQQPVDGATKRTLGTLKQGSGRELTPRED
RLQSESSTGDNSLDSRSDGSGEGDDYVPNSTMMMVTDYLFHFYV*
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