prot_Ecto-sp13_S_contig9352.20955.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9352.20955.1
Unique Nameprot_Ecto-sp13_S_contig9352.20955.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length202
Homology
BLAST of mRNA_Ecto-sp13_S_contig9352.20955.1 vs. uniprot
Match: D7FKD4_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD4_ECTSI)

HSP 1 Score: 360 bits (923), Expect = 2.690e-122
Identity = 190/197 (96.45%), Postives = 195/197 (98.98%), Query Frame = 0
Query:    1 AQGVNSVTAELEGVEKLSDQVARVTLLPSSTPGNMSPSAACAPDFEGTERMVELVQSYRELCNSIDRVANKPFDPSIDVQADDFPHETAERLEVLRRADRYEHALSVKDQMLWEAMQESQRLEEKCQEERNLGQEFAEEAQEWVTLTGKLSDRVNALTIETERTAQLRKENALLARENQQLVRRLETLERDSSGSVG 197
            AQGVNSVTAELEGVEKLSDQVARVTLLPSSTPG+MSPSAACAPDFEGTERMVELVQSYRELCNSIDRVANKPFDPSIDVQADDF HETAERLEVLRRADRYEHALSVKDQMLWEAMQESQRLEEKCQEER+LGQEFAEEAQEWVTLT KLSDRVNALT+ETERTAQLRKENALLARENQ+LVRRLETLERDSSG+VG
Sbjct:  188 AQGVNSVTAELEGVEKLSDQVARVTLLPSSTPGSMSPSAACAPDFEGTERMVELVQSYRELCNSIDRVANKPFDPSIDVQADDFSHETAERLEVLRRADRYEHALSVKDQMLWEAMQESQRLEEKCQEERSLGQEFAEEAQEWVTLTEKLSDRVNALTVETERTAQLRKENALLARENQELVRRLETLERDSSGTVG 384          
BLAST of mRNA_Ecto-sp13_S_contig9352.20955.1 vs. uniprot
Match: A0A6H5JBH8_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBH8_9PHAE)

HSP 1 Score: 251 bits (642), Expect = 3.520e-79
Identity = 144/200 (72.00%), Postives = 149/200 (74.50%), Query Frame = 0
Query:    2 QGVNSVTAELEGVEKLSDQVARVTLLPSSTPGNMSPSAACAPDFEGTERMVELVQSYRELCNSIDRVANKPFDPSIDVQADDFPHETAERLEVLRRADRYEHALSVKDQMLWEAMQ--------------------------------ESQRLEEKCQEERNLGQEFAEEAQEWVTLTGKLSDRVNALTIETERTAQLRK 169
            QGVNSVTAELEGVEKLSDQ A   L+             CA DFEGTERMVELVQSYRELCNSIDRVANKPFDP+IDVQADDFPHETAERLEVLRRADRYEHALSVKDQMLWEAMQ                                ESQRLEEKCQEER+LG+EFAEEAQEWVTLTGKLSDRVNALT+E ERTAQLRK
Sbjct:  239 QGVNSVTAELEGVEKLSDQTACRVLM----------DLVCATDFEGTERMVELVQSYRELCNSIDRVANKPFDPTIDVQADDFPHETAERLEVLRRADRYEHALSVKDQMLWEAMQVSDCRLQSSEMLADKVASEVSPVVSLTTALSSESQRLEEKCQEERSLGREFAEEAQEWVTLTGKLSDRVNALTVEAERTAQLRK 428          
BLAST of mRNA_Ecto-sp13_S_contig9352.20955.1 vs. uniprot
Match: A0A835Z0R6_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0R6_9STRA)

HSP 1 Score: 142 bits (359), Expect = 5.930e-37
Identity = 84/184 (45.65%), Postives = 117/184 (63.59%), Query Frame = 0
Query:    2 QGVNSVTAELEGVEKLSDQVARVTLLPSSTPGNMSPSAACAPDFEGTERMVELVQSYRELCNSIDRVANKPFDPSIDVQADDFPHETAERLEVLRRADRYEHALSVKDQMLWEAMQESQRLEEKCQEERNLGQEFAEEAQEWVTLTGKLSDRVNALTIETERTAQLRKENALLARENQQLVRRL 185
            Q ++ V  ELE +++L+ QVA          G M+ +     +FE T +M+ELVQSY +LC S++R A++  D SI V  +DFP ETAERLEVLRRADRYE AL++KDQM+W  MQE+  + EK   E  L +E+A E  EWV LT +L+ +++ L +E  R   L +ENA L  +N+ L  RL
Sbjct:  256 QRMSDVATELEQLDRLAQQVAGAAGTQEQG-GGMAGAERYTHEFESTAKMIELVQSYGDLCASVERAASRLQDTSIAVTPNDFPQETAERLEVLRRADRYEKALAIKDQMIWNLMQEASHVVEKATAEAVLSKEYANEMAEWVDLTNRLTAQISELRLENARVPALEQENAKLEEQNRMLRARL 438          
BLAST of mRNA_Ecto-sp13_S_contig9352.20955.1 vs. uniprot
Match: A0A7R9YGK8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YGK8_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 2.730e-15
Identity = 39/88 (44.32%), Postives = 61/88 (69.32%), Query Frame = 0
Query:   70 NKPFDPSIDVQADDFPHETAERLEVLRRADRYEHALSVKDQMLWEAMQESQRLEEKCQEERNLGQEFAEEAQEWVTLTGKLSDRVNAL 157
            ++P    +DV  DD P ETAERLEVLRRAD+YE AL++KD MLWE +QE   L +K +++    ++F +E   W+ L+ K+++ +++L
Sbjct:    1 SRPVGALVDVPVDDLPTETAERLEVLRRADKYEEALALKDAMLWELLQERDALTDKQEKDGKTLKDFEDEMANWLVLSDKMAEEISSL 88          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9352.20955.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FKD4_ECTSI2.690e-12296.45EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JBH8_9PHAE3.520e-7972.00EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835Z0R6_9STRA5.930e-3745.65EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A7R9YGK8_9STRA2.730e-1544.32Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 112..139
NoneNo IPR availableCOILSCoilCoilcoord: 164..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9352contigEcto-sp13_S_contig9352:1..3990 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9352.20955.1mRNA_Ecto-sp13_S_contig9352.20955.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9352 1..3990 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9352.20955.1 ID=prot_Ecto-sp13_S_contig9352.20955.1|Name=mRNA_Ecto-sp13_S_contig9352.20955.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=202bp
AQGVNSVTAELEGVEKLSDQVARVTLLPSSTPGNMSPSAACAPDFEGTER
MVELVQSYRELCNSIDRVANKPFDPSIDVQADDFPHETAERLEVLRRADR
YEHALSVKDQMLWEAMQESQRLEEKCQEERNLGQEFAEEAQEWVTLTGKL
SDRVNALTIETERTAQLRKENALLARENQQLVRRLETLERDSSGSVGGQG
F*
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