prot_Ecto-sp13_S_contig9349.20950.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9349.20950.1 vs. uniprot
Match: D7FPL2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPL2_ECTSI) HSP 1 Score: 99.0 bits (245), Expect = 6.450e-23 Identity = 42/45 (93.33%), Postives = 43/45 (95.56%), Query Frame = 0
Query: 7 LIRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFRWV 51
+ RWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFR V
Sbjct: 64 ICRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFRHV 108
BLAST of mRNA_Ecto-sp13_S_contig9349.20950.1 vs. uniprot
Match: A0A8B7UF36_CASCN (Cleavage and polyadenylation specificity factor subunit 4 n=1 Tax=Castor canadensis TaxID=51338 RepID=A0A8B7UF36_CASCN) HSP 1 Score: 47.8 bits (112), Expect = 4.670e-5 Identity = 19/45 (42.22%), Postives = 29/45 (64.44%), Query Frame = 0
Query: 8 IRWRTDCQVEGCAFRHEEEQ-EAPECAMYQQGFCRQGPTCRFRWV 51
+R DC C+FRHE+ ++ +C Y QGFC++GP C++R V
Sbjct: 72 LRGLCDCSNRECSFRHEKPAFKSQDCPWYDQGFCKEGPLCKYRHV 116 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9349.20950.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig9349.20950.1 ID=prot_Ecto-sp13_S_contig9349.20950.1|Name=mRNA_Ecto-sp13_S_contig9349.20950.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=51bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|