prot_Ecto-sp13_S_contig9343.20944.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9343.20944.1
Unique Nameprot_Ecto-sp13_S_contig9343.20944.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length244
Homology
BLAST of mRNA_Ecto-sp13_S_contig9343.20944.1 vs. uniprot
Match: D8LJ48_ECTSI (Similar to doublecortin and CaM kinase-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ48_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 2.120e-84
Identity = 165/243 (67.90%), Postives = 173/243 (71.19%), Query Frame = 0
Query:    1 MMIKYQPLRLCAGVVFPLPLSDHRAAVDTFAARLMAESRRWTCRVSNEISIGFGHLAVVLAAAVVVWRWVPRRRYHWKQQESHDTPDARSADEDVDLESGGDDMVNPAGSYIDSVASAGADFLSTGGDIEFRRSDIESGSSGVQSREAIGAAGDSSLSGEEKESASERSSCDTSATVRTHHPDDTDSGTLGSAEMAATXXXXXXXXXXXXXXXXXXXXXXSTDEGQPSTGTNSSAMAMSKESS 243
            MM++YQPLRL  GVV PLP SDHR+AVDTFAAR  AESRRW CR   E+      LAVV  AAVVVWRWV RRRYHWKQQE HDT DARS DED DLES GDD+VNP GS I+SVASAGADFLST GDI              QSREAIGAAGDSSLSGEEKESASERSSCDTSATVRTHHPDDTDSG+LGS   AA                       ST+E QPSTGTNS AMAM KESS
Sbjct:    1 MMMRYQPLRLRVGVVVPLPCSDHRSAVDTFAARFTAESRRWRCR---ELVT----LAVVFVAAVVVWRWVSRRRYHWKQQERHDTADARSVDEDDDLESRGDDVVNPEGSDINSVASAGADFLSTRGDIXXXXXXXXXXXXXXQSREAIGAAGDSSLSGEEKESASERSSCDTSATVRTHHPDDTDSGSLGSEISAAATAAQAEAGSLPSDRNGSRF---STEEAQPSTGTNSPAMAMRKESS 233          
BLAST of mRNA_Ecto-sp13_S_contig9343.20944.1 vs. uniprot
Match: A0A6H5KAI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAI9_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 9.450e-37
Identity = 101/145 (69.66%), Postives = 107/145 (73.79%), Query Frame = 0
Query:  104 MVNPAGSYIDSVASAGADFLSTGGDIEFRRSDIESGSSGVQSREAIGAAGDSSLSGEEKES-----ASERSSCDTSATVRTHHPDDTDSGTLGSAEMAATXXXXXXXXXXXXXXXXXXXXXXSTDEGQPSTGTNSSAMAMSKESS 243
            MVNPAGS I S+ SAGADFLSTGGD+E          SGVQSREAIGAAG+SSLSGEEKES     ASERSSCDTSA V+THHP DT+S TL SAE AA XXXXXXXXXX            ST+E QPSTGTNS AMAMSKESS
Sbjct:    1 MVNPAGSDIRSIDSAGADFLSTGGDMEXXXXXXXXXXSGVQSREAIGAAGNSSLSGEEKESVGTRSASERSSCDTSAPVQTHHPGDTNSATLASAETAAXXXXXXXXXXXGSLPSDRNRSRFSTEEVQPSTGTNSXAMAMSKESS 145          
BLAST of mRNA_Ecto-sp13_S_contig9343.20944.1 vs. uniprot
Match: D7G381_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G381_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 2.390e-29
Identity = 97/193 (50.26%), Postives = 110/193 (56.99%), Query Frame = 0
Query:   56 LAVVLAAAVVVWRWVPRRRYHWKQQESHDTPDARSADEDVDLESGGDD-MVNPAGSYIDSVASAGADFLSTGGD-IEFRRSDIESGSSGVQSREAIGAAGDSSLSGEEKESASERSSCDTSATVRTHH-PDDTDSGTLGSAEMAATXXXXXXXXXXXXXXXXXXXXXXSTDEGQP---STGTNSSAMAMSKES 242
            LAVVLAAAVVVWRWV R+ + WK+Q+  +T DARS DE  DLE+G DD  VNPAG  I+  A+   DFLS   D +E RRSD++SGS GV+SRE                  SERSSC T  T RTHH PDDTDSGTL  AEMAA                       S    +P   S GT S AMAMSKES
Sbjct:   73 LAVVLAAAVVVWRWVSRKVHQWKEQDRRNTADARSDDEGSDLEAGSDDDRVNPAGPDIEPGAT---DFLSASADDLESRRSDVDSGSWGVRSRE------------------SERSSCSTWMTARTHHNPDDTDSGTLEWAEMAAAVAEGGSLPSDR-----------SVSRNRPEEASRGTISLAMAMSKES 233          
BLAST of mRNA_Ecto-sp13_S_contig9343.20944.1 vs. uniprot
Match: A0A6H5JFK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFK0_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 7.740e-23
Identity = 61/88 (69.32%), Postives = 65/88 (73.86%), Query Frame = 0
Query:   82 SHDTPDARSADEDVDLESGGDDMVNPAGSYIDSVASAGADFLSTGGDIEFRRSDIESGSSGVQSREAIGAAGDSSLSGEEKESASERS 169
            SHDT DARSADED +LESGGDDMVNPAGS I  + SAGADFLSTGGD              VQSREAIGAAG+SSLSGEEK+S   RS
Sbjct:    7 SHDTADARSADEDDNLESGGDDMVNPAGSDIRFIDSAGADFLSTGGDXXXXXXXXXXXXXXVQSREAIGAAGNSSLSGEEKQSVRTRS 94          
BLAST of mRNA_Ecto-sp13_S_contig9343.20944.1 vs. uniprot
Match: A0A6H5KBW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW4_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 1.080e-15
Identity = 36/45 (80.00%), Postives = 38/45 (84.44%), Query Frame = 0
Query:    1 MMIKYQPLRLCAGVVFPLPLSDHRAAVDTFAARLMAESRRWTCRV 45
            MM+KYQPLRLCAGVVFP P  DHR+AVDTFAAR  AESRRW C V
Sbjct:    1 MMMKYQPLRLCAGVVFPFPCYDHRSAVDTFAARFTAESRRWRCGV 45          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9343.20944.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LJ48_ECTSI2.120e-8467.90Similar to doublecortin and CaM kinase-like 3 n=1 ... [more]
A0A6H5KAI9_9PHAE9.450e-3769.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G381_ECTSI2.390e-2950.26N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5JFK0_9PHAE7.740e-2369.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBW4_9PHAE1.080e-1580.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..70
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 71..243
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..48
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availableTMHMMTMhelixcoord: 49..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9343contigEcto-sp13_S_contig9343:1511..4169 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9343.20944.1mRNA_Ecto-sp13_S_contig9343.20944.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9343 1511..6362 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9343.20944.1 ID=prot_Ecto-sp13_S_contig9343.20944.1|Name=mRNA_Ecto-sp13_S_contig9343.20944.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=244bp
MMIKYQPLRLCAGVVFPLPLSDHRAAVDTFAARLMAESRRWTCRVSNEIS
IGFGHLAVVLAAAVVVWRWVPRRRYHWKQQESHDTPDARSADEDVDLESG
GDDMVNPAGSYIDSVASAGADFLSTGGDIEFRRSDIESGSSGVQSREAIG
AAGDSSLSGEEKESASERSSCDTSATVRTHHPDDTDSGTLGSAEMAATAT
ATAAQAGAGCPPSDRNRSRFSTDEGQPSTGTNSSAMAMSKESS*
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