mRNA_Ecto-sp13_S_contig9327.20923.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9327.20923.1 vs. uniprot
Match: A0A6H5JFB5_9PHAE (JmjC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFB5_9PHAE) HSP 1 Score: 553 bits (1426), Expect = 5.390e-191 Identity = 272/277 (98.19%), Postives = 275/277 (99.28%), Query Frame = 1
Query: 1 QVFMCSLDRDTYFHQPYKYPMFKDLVKLSGGCQGAQSTATSISKLQEEIDANPEGYLEPTGFVFHMSRCGSTLTANLMGSSPHNIVYSESKPPVAVMSLCDQVGCTEEQRVAALRTVILAMGKTSFHKHMFFKFQSSQTRFIHYYRKAFPNTPWVFVYRDPVPVMMSLLGFKAGMRQRPSRSTPCLRSMGSPPDETAKLLGMSTSEAKNAPFERYCAAHLATLVESALESVDDAASSGGAEGHAVDYETLPNAIVPVMSELFKAPLTPEEEYYALEV 831
QVFMCSLDRDTYFHQPYKYPMFKDLVKLSGGCQGAQSTATSISKLQ+EIDANPEGYLEPTGFVFHMSRCGSTLTANLMGSSPHNIVYSESKPPVAVMSLCDQVGCTEEQRVAALRTVILAMGKTSFHKHMFFKFQSSQTRFIHYYRKAFPNTPWVFVYRDPVPVMMSLLGFKAGM QRPSRSTPCLRSMGSPPDETAKLLGMSTSEAK APFERYCAAHLATLVESALESVDDAA+SGGAEGHAVDYETLPNAIVPVMSELFKAPLTPEEEYYALE+
Sbjct: 95 QVFMCSLDRDTYFHQPYKYPMFKDLVKLSGGCQGAQSTATSISKLQDEIDANPEGYLEPTGFVFHMSRCGSTLTANLMGSSPHNIVYSESKPPVAVMSLCDQVGCTEEQRVAALRTVILAMGKTSFHKHMFFKFQSSQTRFIHYYRKAFPNTPWVFVYRDPVPVMMSLLGFKAGMTQRPSRSTPCLRSMGSPPDETAKLLGMSTSEAKKAPFERYCAAHLATLVESALESVDDAAASGGAEGHAVDYETLPNAIVPVMSELFKAPLTPEEEYYALEI 371
BLAST of mRNA_Ecto-sp13_S_contig9327.20923.1 vs. uniprot
Match: A0A7S2GE74_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GE74_9STRA) HSP 1 Score: 189 bits (479), Expect = 1.270e-53 Identity = 114/277 (41.16%), Postives = 156/277 (56.32%), Query Frame = 1
Query: 4 VFMCSLDRDTYFHQPYKYPMFKDLVKLSGGCQGAQSTATSISKLQEEIDANPEGYLEPTGFVFHMSRCGSTLTANLMGSSPHNIVYSESKPPVAVMSLCDQVGCTEEQRVAALRTVILAMGKTSFHKHMFFKFQSSQTRFIHYYRKAFPNTPWVFVYRDPVPVMMSLLGFKAGMRQRPSRSTPCLRSMGSPPDETAKLLGMSTSEAKNAPFERYCAAHLATLVESALESVDDAASSGGAEGHAVDYETLPNAI-VPVMSELFKAPLTPEEEYYALEV 831
V +C LD DTY+ P K PMF+DLV S C+G +S L+ E++A+P+G L+PTGFVFH SRCGSTL A+++GS H++ +SES PP A+ E+ V LRTV+L M ++S+H FFKFQS I + AFP TPW FV+R+PV VMMS FK G + CLR+ P K++ E + E +CA HLA L E A A + A G ++YE LP + + V+ + F+AP+ E + LEV
Sbjct: 121 VTLCKLDYDTYWRNPDKLPMFRDLVAASK-CRGKNVKEEKLSVLKAEMEADPDGTLQPTGFVFHESRCGSTLVADMLGSQAHHLTFSESSPPAAIAG-------KGERHVGILRTVMLLMCRSSYHTRCFFKFQSVNAPRIRIFAAAFPETPWAFVFREPVQVMMS--HFKGG-----TGGAVCLRARNRPEKGHRKIIS-ELGETDHLSAEEFCAVHLAYLSECAYS-----AYTSTANGLLLNYEDLPEILPMKVLKDHFRAPVDSEGQARMLEV 376
BLAST of mRNA_Ecto-sp13_S_contig9327.20923.1 vs. uniprot
Match: A0A7S2SP01_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP01_9STRA) HSP 1 Score: 186 bits (472), Expect = 4.540e-52 Identity = 109/266 (40.98%), Postives = 158/266 (59.40%), Query Frame = 1
Query: 4 VFMCSLDRDTYFHQPYKYPMFKDLVKLSGGCQGAQSTATSISKLQEEIDANPEGYLEPTGFVFHMSRCGSTLTANLMGSSPHNIVYSESKPPVAVMSLCDQVGCTEEQRVAALRTVILAMGKTSFHKHMFFKFQSSQTRFIHYYRKAFPNTPWVFVYRDPVPVMMSLLGFKAGMRQRPSRSTPCLRSMGSPPDETAKLLGMSTSEAKNAPFERYCAAHLATLVESALESVDDAASSGGAEGHAVDYETLPNAIVP-VMSELFKAPL 798
V +C L+ D Y+ +P PMFK LV S C+G+ +S L++E++A+P+G L+PTGFVFH +RCGSTL A+++ S PH++V+SES PP +V + R + LR V+L M ++ +H FFKFQS T I +++AFP PW FV+R+PV VMMS FK G + CLRS SP +LG+S+ + E +CAAHLA L +SAL AA + G + YE LP+A++ ++ + F AP+
Sbjct: 135 VTLCKLNYDKYWREPSSLPMFKHLVGASN-CRGSNYRTERLSTLKKEMEADPDGTLQPTGFVFHETRCGSTLVADMLASHPHHLVFSESSPPASVAAT---------GRASVLRDVMLLMCRSHYHTRCFFKFQSINTPRIGVFQQAFPEVPWAFVFREPVQVMMS--HFKGG-----TSGAVCLRSKSSPTKAHLAILGVSSG--RRVSNEDFCAAHLAYLSQSAL-----AAFERSSNGMMLSYEDLPDAVISKLLPQHFAAPV 376
BLAST of mRNA_Ecto-sp13_S_contig9327.20923.1 vs. uniprot
Match: A0A7S2H7V9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H7V9_9STRA) HSP 1 Score: 181 bits (459), Expect = 7.790e-51 Identity = 114/279 (40.86%), Postives = 160/279 (57.35%), Query Frame = 1
Query: 10 MCSLDRDTYFHQPYKYPMFKDLVKLSGGCQGAQSTATSISKLQEEIDANPEGYLEPTGFVFHMSRCGSTLTANLMGSSPHNIVYSESKPPVAVMSLCDQVGCTEEQRVAALRTVILAMGKTSFHKHMFFKFQSSQTRFIHYYRKAFPNTPWVFVYRDPVPVMMSLL---GFKAGMRQRPSRSTPCLRSMGSPPDETAKLLGMSTSEAKNAPFERYCAAHLATLVESALESVDDAASSGGAEGHAVDYETLPNAIVP--VMSELFKAPLTPEEEYYALEV 831
+C LD D+Y+ P PMFKDLV S C G S + +S L++E++A+P+G L+PTGFVFH SRCGSTL A+++GS H++V+SES PP ++ S RV LR V+L M ++S+H FFKFQS I Y AFP+ PW FV+R+PV VMMS L G AG C+RS SP + +++ + + E +CA HLA L ESA E+ ++ G ++YE LP+ I+P V+ + F+ PL E + L V
Sbjct: 104 LCKLDYDSYWRNPNNLPMFKDLVGKSK-CSGKNSKSAKLSVLKKEMEADPDGTLQPTGFVFHESRCGSTLVADMLGSQAHHLVFSESAPPSSIASRGPNA-----HRV--LRDVMLLMCRSSYHTRCFFKFQSINAPRIKTYLAAFPDVPWTFVFREPVQVMMSHLKGSGSHAG--------AVCMRSRRSPTAKHKQIIAELGKGSSSVSAEEFCAVHLAYLSESAYEAFTSTST-----GMLLNYEDLPS-ILPSKVVGDHFRVPLDAEGQTRMLNV 360
BLAST of mRNA_Ecto-sp13_S_contig9327.20923.1 vs. uniprot
Match: A0A7S3ZKE9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZKE9_9STRA) HSP 1 Score: 181 bits (460), Expect = 1.280e-50 Identity = 114/274 (41.61%), Postives = 155/274 (56.57%), Query Frame = 1
Query: 1 QVFMCSLDRDTYFHQPYKYPMFKDLVKLSGGCQGAQSTATSISKLQEEIDANPEGYLEPTGFVFHMSRCGSTLTANLMGSSPHNIVYSESKPPVAVMSLCDQVGCTEEQRVAALRTVILAMGK--TSFHKHMFFKFQSSQTRFIHYYRKAFPNTPWVFVYRDPVPVMMSLLGFKAGMRQRPSRSTPCLRSMGSPPDETAKLL-GMSTSEAKNAPFERYCAAHLATLVESALESVDDAASSGGAEGHAVDYETLPNAIVP-VMSELFKAPLTPEE 810
+V +C L DTY+ P K PMF+DL S +G T ++ + + + P ++P+GFVFH SR GSTL AN++ + P NIVYSES PP AV++ C C+++++ L+ +I MG T++H H+FFKFQS+ I AFP TPW+FVYRDPV MMS FK G+ + PCLR SPP T K+L S ++A E YCAAHLA L SAL+ A G VDY ++P A+ V + F L PE+
Sbjct: 123 RVSLCKLAFDTYWRDPSKTPMFRDLASASRCGRGRAGTLNTLYEDMRKKNIKP---VKPSGFVFHESRVGSTLVANMLAAVPTNIVYSESAPPPAVLNHCRS--CSKQRKTDILQKLIALMGASPTNYHTHLFFKFQSATVPNIRSLLDAFPETPWLFVYRDPVQTMMS--HFKNGVG-----NGPCLRQRRSPPPATIKILKAESAAKASRTSPENYCAAHLAMLTSSALD-----ADGSSDRGLLVDYASMPGALEAYVFPKHFGLSLAPED 379
BLAST of mRNA_Ecto-sp13_S_contig9327.20923.1 vs. uniprot
Match: A0A4D9CT70_9STRA (JmjC domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CT70_9STRA) HSP 1 Score: 175 bits (444), Expect = 2.510e-46 Identity = 99/255 (38.82%), Postives = 135/255 (52.94%), Query Frame = 1
Query: 10 MCSLDRDTYFHQPYKYPMFKDLVKLSGGCQGAQSTATSISKLQEEIDANPEGYLEPTGFVFHMSRCGSTLTANLMGSSPHNIVYSESKPPVAVMSLCDQVGCTEEQRVAALRTVILAMGKTSFHKHMFFKFQSSQTRFIHYYRKAFPNTPWVFVYRDPVPVMMSLLGFKAGMRQRPSRSTPCLRSMGSPPDETAKLLGMSTSEAKNAPFERYCAAHLATLVESALESVDDAASSGGAEGHAVDYETLPNAIVPVM 774
+C D Y P ++PM +DLV + S+ + E L+PTGF+FH SR GSTL AN++ S P N+VYSE P V+ LC GC+EE V LR ILAMG++ H H F KF SS + KAFP TPW ++YRDPV +++S F+ G R PC+R+ + P +L A E YCAAHL L ++ALE ++ G++GHAV YETL ++ V+
Sbjct: 162 LCQFDISPYHRNPEQFPMSRDLVGAFCSKNRLKHKLASVHAVDERAGKQ----LQPTGFIFHESRVGSTLVANMLASVPTNLVYSEPSVPAHVIHLCKSAGCSEETTVRLLRMAILAMGRSHHHDHFFIKFSSSTVVDMDLILKAFPETPWAYIYRDPVEIIVS--NFQRG------RGGPCIRAKKNAPKAVQDILKTDRRGASRVSDEEYCAAHLTMLCQAALEQME----LPGSKGHAVAYETLVEDVLRVL 400
BLAST of mRNA_Ecto-sp13_S_contig9327.20923.1 vs. uniprot
Match: A0A7S2XNG6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNG6_9STRA) HSP 1 Score: 167 bits (422), Expect = 5.460e-45 Identity = 110/267 (41.20%), Postives = 150/267 (56.18%), Query Frame = 1
Query: 13 CSLDRDTYFHQPYKYPMFKDLVKLSGGCQGAQSTATS--ISKLQEEIDAN--------PEGYLEPTGFVFHMSRCGSTLTAN-LMGSSP-HNIVYSESKPPVAVMSLC--DQVGCTEEQRVAALRTVILAMGKTSF--HKHMFFKFQSSQTRFIHYYRKAFPNTPWVFVYRDPVPVMMSLLGFKAGMRQRPSRSTPCLRSMGSPPDETAKLLGMSTSE-AKNAPFERYCAAHLATLVESALESVDDAASSGGAEGHAVDYETLPNAI 762
C L+ + + P KYPMF+DLV S CQ + T I++L E DA P +EPTGFVFH SRCGSTL AN L+G P H+ VYSES PP+ ++ C D C E R V+ MG+T+ ++FFK QS+ ++ I ++ AFP+TPW+FVYR+PV VMMS L R C+RS SPP L+ E A + +E YCAAHLA + ESA++++ +A+ G AV+Y TLP+ +
Sbjct: 127 CQLNFAAHKNDPSKYPMFRDLVAASPDCQKSHVTLDLKYIAELAREFDAEMTELGTKVPHA-MEPTGFVFHESRCGSTLVANSLIGMDPKHHRVYSESAPPLQALTACGEDYQSCDVEIAADLFRDVVYLMGRTNDAEESNLFFKIQSAGSKNIATFQTAFPHTPWIFVYREPVQVMMSQL------RVARIEQANCVRSRRSPPKRIKSLVQKIIREHASDLDYEDYCAAHLAVICESAVKALQTSAN-----GLAVNYNTLPDIL 381
BLAST of mRNA_Ecto-sp13_S_contig9327.20923.1 vs. uniprot
Match: A0A7S3GTU2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GTU2_9STRA) HSP 1 Score: 171 bits (432), Expect = 1.020e-44 Identity = 108/279 (38.71%), Postives = 144/279 (51.61%), Query Frame = 1
Query: 4 VFMCSLDRDTYFHQPYKYPMFKDLVKLSGGCQGAQSTATSISKLQEEIDANPEG----YLEPTGFVFHMSRCGSTLTANLMGSSPHNIVYSESKPPVAVMSLCDQVGCTEEQRVAALRTVILAMGKTSFHKHMFFKFQSSQTRFIHYYRKAFPNTPWVFVYRDPVPVMMSLLGFKAGMRQRPSRSTPCLRSMGSPPDETAKLLGMSTSEAKNAPFERYCAAHLATLVESALES-------VDDAASSGGAEGHAVDYETLPNAIVPVMSELFKA-PLTP 804
V +C L+ Y P+ PMFKDLV S C GA S+ L +EI NP + P GFVFH SR GSTL AN M S P+ +V+SES P + M C+ CT E V R V MG++ FHKH+FFKFQS ++ +AFP+ PW FVYR PV MMS L Q + PC+RS PP + + + + +AP E +CAAHL L A+ + VD A + G + Y++LP + ++ LF+ PL P
Sbjct: 9 VILCKLNFQKYAESPHLSPMFKDLVGNSK-CMGANRRRESLKTLMQEIADNPNDPNSRVVPPNGFVFHESRVGSTLIANFMASDPYAMVFSESTPMASAMLHCES--CTHEYNVQLFRDVTTLMGRSPFHKHLFFKFQSITVTSMNIALEAFPDVPWAFVYRQPVQTMMSHLDPAKSNNQA---NAPCMRSKRHPPRDVQEAI-TQFAPGWSAPNEAWCAAHLNMLCNYAIRNFEKYGTRVDPATNQVVQRGVLIPYDSLPGFVPQILLPLFRINPLPP 280
BLAST of mRNA_Ecto-sp13_S_contig9327.20923.1 vs. uniprot
Match: F2UI36_SALR5 (JmjC domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UI36_SALR5) HSP 1 Score: 169 bits (428), Expect = 3.360e-44 Identity = 104/254 (40.94%), Postives = 146/254 (57.48%), Query Frame = 1
Query: 1 QVFMCSLDRDTYFHQPYKYPMFKDLVKLSGGCQGAQSTATSISKLQEEIDANPEGYLEPTGFVFHMSRCGSTLTANLMGSSPHNIVYSESKPPVAVMSLCDQVGCTEEQRVAALRTVILAMGKTSFHKHMFFKFQSSQTRFIHYYRKAFPNTPWVFVYRDPVPVMMSLLGFKAGMRQRPSRSTPCLRSMGSPPDETAKLLGMSTSEAKNAPFERYCAAHLATLVESALESVDDAASSGGAEGHAVDYETLPNAI 762
+V +C L+ + Y +PYKYPMFKDL+++S C+G T T ++ L+ I PE L+P GFVFH SR GSTL AN++ + P N+V+SES PP A+ C ++ +R ++ AM + HK +FFKFQS I Y +AFP PW+FVYRDPV VM S K + PCLR+ SP + + +KN E +CAAHLATL +SAL ++D + + G AV+Y LP+ +
Sbjct: 83 KVELCRLNIEAYTAEPYKYPMFKDLLRVSN-CKGNTMTVT-LNDLRFGI---PET-LDPAGFVFHESRVGSTLIANILAADPDNLVFSESAPPPAIALHCP---APLPEKAEMMRVLLRAMSNSVRHKRLFFKFQSVNANAIPLYTEAFPEVPWMFVYRDPVEVMASHFKQKVPAGAK----VPCLRAKNSPTPLHRRYI-----RSKNPSDEEFCAAHLATLCDSALHALDSSPN-----GIAVNYHDLPDVL 313
BLAST of mRNA_Ecto-sp13_S_contig9327.20923.1 vs. uniprot
Match: A0A7S4JXS8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JXS8_9STRA) HSP 1 Score: 161 bits (407), Expect = 8.850e-43 Identity = 108/289 (37.37%), Postives = 148/289 (51.21%), Query Frame = 1
Query: 13 CSLDRDTYFHQPYKYPMFKDLVKLSGGCQGA--QSTATSISKLQE------------EIDANPEGYLEPTGFVFHMSRCGSTLTANLMGS-SPHNI-VYSESKPPVAVMSLCDQVG--CTEE--QRVAALRTVILAMGKTSF--HKHMFFKFQSSQTRFIHYYRKAFPNTPWVFVYRDPVPVMMSLLGFKAGMRQRPSRSTPCLRSMGSPPDETAKLLGMSTSEAKNAPFERYCAAHLATLVESALESVDDAASSGGAEGHAVDY-ETLPNAIVPVMSELFKAPLTPEE 810
C+LD + P PMF+DLV S C + ++KL ++ +EPTGFVFH SRCGSTL AN + + SP + VYSES PP+ M C + G C A L+ + MG+T+ +H+FFK QS TRFI +R+AFP+TPW+FVYRDPV VMMS L R C+R SPP+ L+ + + E YCAAHLAT+ SAL ++ + + GHAV+Y + + + V+ FK PL +E
Sbjct: 140 CALDWALHKADPSSVPMFRDLVGKSQDCSNGSFRMDLKEVAKLARAHDNEAMRAAGGRVEDAATRAMEPTGFVFHESRCGSTLAANTLAAMSPDSSRVYSESPPPLKAMIACGEAGEKCAGSIGSAAALLKDAVYMMGRTNDPEERHLFFKVQSIGTRFIKVFRRAFPDTPWIFVYRDPVQVMMSHLDMPHMERAN------CVRPRASPPNSVRDLVRSEGMKVSSLTHEEYCAAHLATICNSALAELESSET-----GHAVNYNDIIDDLTTRVIPHHFKVPLNDQE 417 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9327.20923.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9327.20923.1 >prot_Ecto-sp13_S_contig9327.20923.1 ID=prot_Ecto-sp13_S_contig9327.20923.1|Name=mRNA_Ecto-sp13_S_contig9327.20923.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=274bp MCSLDRDTYFHQPYKYPMFKDLVKLSGGCQGAQSTATSISKLQEEIDANPback to top mRNA from alignment at Ecto-sp13_S_contig9327:15..3569- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9327.20923.1 ID=mRNA_Ecto-sp13_S_contig9327.20923.1|Name=mRNA_Ecto-sp13_S_contig9327.20923.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3555bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9327:15..3569- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9327:15..3569- >mRNA_Ecto-sp13_S_contig9327.20923.1 ID=mRNA_Ecto-sp13_S_contig9327.20923.1|Name=mRNA_Ecto-sp13_S_contig9327.20923.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=822bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9327:15..3569- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |