prot_Ecto-sp13_S_contig12510.2090.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12510.2090.1
Unique Nameprot_Ecto-sp13_S_contig12510.2090.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length140
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12510.2090.1 vs. uniprot
Match: A0A6H5K2H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2H3_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 4.110e-14
Identity = 67/92 (72.83%), Postives = 68/92 (73.91%), Query Frame = 0 
Query:   37 PLFLKRNVRRVEGLKPLARFPRNDDDDIDNGPGKNRNAKRAGGXXXXXXXXXXXXXXXXXXGGGGGGGC-----RSGAQFAALPSTVASPPT 123
            PLFLKRNVRRVEGLKP ARFPRNDDD     P K R A+RAGG  XXXXXXXXXXXXXXXX  GG GGC     R GA   ALPSTVAS PT
Sbjct:  634 PLFLKRNVRRVEGLKPPARFPRNDDDXXXXXPRKKRTARRAGGGLXXXXXXXXXXXXXXXXXVGGVGGCSDGGRRPGAHSTALPSTVASAPT 725
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12510.2090.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K2H3_9PHAE4.110e-1472.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12510contigEcto-sp13_S_contig12510:467..886 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12510.2090.1mRNA_Ecto-sp13_S_contig12510.2090.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12510 467..887 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12510.2090.1 ID=prot_Ecto-sp13_S_contig12510.2090.1|Name=mRNA_Ecto-sp13_S_contig12510.2090.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=140bp
RGKGSANGNAPAVVTAAAAGDDGEKKKNAAADTGGPPLFLKRNVRRVEGL
KPLARFPRNDDDDIDNGPGKNRNAKRAGGGLKPLAWRPRNDIDDNDNGGG
GGGGCRSGAQFAALPSTVASPPTSTVADAAAATAAAAAAA
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