mRNA_Ecto-sp13_S_contig93.20890.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig93.20890.1 vs. uniprot
Match: D8LEM3_ECTSI (ADF-H domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEM3_ECTSI) HSP 1 Score: 271 bits (694), Expect = 5.030e-84 Identity = 138/145 (95.17%), Postives = 138/145 (95.17%), Query Frame = 2
Query: 110 MQVGEAKALHTTKRSSGIDVSDPSLGEAWASIRTDGEPQTNWCAFTYAEGSNSVINLLGSGTGGVPELCSILLDSMVAFCGVRVGDDKGSARFHRILFVGEEVGGMKKGRAALAKNAVFAVFEGASGGDHDFSSVEDLSAASVFQ 544
MQVGEAKALHTTKRSSGIDVSD SL EAWASIRTDGEPQTNWCAFTYAEGSNSVI LLGSG GGV ELCS LLDSMVAFCGVRVGDDKGSARFHRILFVGEEVGGMKKGRAALAKNAVFAVFEGASGGDHDFSSVEDLS ASVFQ
Sbjct: 1 MQVGEAKALHTTKRSSGIDVSDASLAEAWASIRTDGEPQTNWCAFTYAEGSNSVIKLLGSGIGGVSELCSTLLDSMVAFCGVRVGDDKGSARFHRILFVGEEVGGMKKGRAALAKNAVFAVFEGASGGDHDFSSVEDLSVASVFQ 145
BLAST of mRNA_Ecto-sp13_S_contig93.20890.1 vs. uniprot
Match: A0A836CLE6_9STRA (ADF-H domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLE6_9STRA) HSP 1 Score: 117 bits (292), Expect = 6.220e-26 Identity = 61/124 (49.19%), Postives = 84/124 (67.74%), Query Frame = 2
Query: 110 MQVGEAKALHTTKRSSGIDVSDPSLGEAWASIRTDGEPQTNWCAFTYAEGSNSVINLLGSGTGGVPELCSILLDSMVAFCGVRVGDDKGSARFHRILFVGEEVGGMKKGRAALAKNAVFAVFEG 481
MQVG+AKALHTT+RSSG+DVS P L AW +R+ + ++WC F Y G N+ I + +G+ G L S L DSM A+ G+RV GS +F R+ F+G E+ GMK+ +A+L +NAVF +FEG
Sbjct: 1 MQVGDAKALHTTQRSSGLDVSSPELAAAWQKVRSKSD--SHWCLFGYGPGGNTQIVVTAAGSDGFEGLRSSLTDSMAAWAGLRVSV-LGSTKFVRLAFIGTEIAGMKRAKASLHRNAVFHLFEG 121
BLAST of mRNA_Ecto-sp13_S_contig93.20890.1 vs. uniprot
Match: A0A7S2V4Y3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4Y3_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 2.200e-18 Identity = 55/145 (37.93%), Postives = 81/145 (55.86%), Query Frame = 2
Query: 110 MQVGEAKALHTTKRSSGIDVSDPSLGEAWASIRTDGEPQTNWCAFTYAEGSNSVINLLGSGTGGVPELCSILLDSMVAFCGVRVGDDKGSARFHRILFVGEEVGGMKKGRAALAKNAVFAVFEGASGGDHDFSSVEDLSAASVFQ 544
MQ GEAKALHT +SSG++VS+ + +AW + R + + WC F+Y EG + + + G G + + + VAFCG D G+ + R+ F+GE VGGMK+G+A + KNAVF G S D +S+ DL +
Sbjct: 9 MQAGEAKALHTRTQSSGLNVSEE-VQQAWEAFRAE-DSLLQWCWFSYEEGGSKKVVVKEIGNTGYDGMVASFSEDDVAFCGFSANVD-GNKKLFRVFFIGENVGGMKRGKAGMHKNAVFDKMPGCSA-DVVANSLSDLEREKTIE 149
BLAST of mRNA_Ecto-sp13_S_contig93.20890.1 vs. uniprot
Match: A0A7S1MGN3_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1MGN3_ALECA) HSP 1 Score: 77.4 bits (189), Expect = 4.640e-13 Identity = 46/115 (40.00%), Postives = 65/115 (56.52%), Query Frame = 2
Query: 146 KRSSGIDVSDPSLGEAWASIRTDGEPQTNWCAFTYAEGSNSVINLLGSGTGGVPELCSILLDSMVAFCGVRVGDDKGSARFHRILFVGEEVGGMKKGRAALAKNAVFAVFEGASG 490
K SSG+DVSDP + EAWA +RTD + +T W Y EG S + + SG GG EL + + D + F G+R + +F ++ +GE+ G M +GRAA KNA +G G
Sbjct: 20 KVSSGLDVSDPGIAEAWAKVRTDSDAET-WMLLEY-EGK-SKLKVRASGAGGAEELLASITDDQILFGGLRTK----AGKFICLMCMGEDAGAMARGRAAAHKNAAVNALDGTIG 127
BLAST of mRNA_Ecto-sp13_S_contig93.20890.1 vs. uniprot
Match: A0A8J5XE07_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XE07_DIALT) HSP 1 Score: 72.0 bits (175), Expect = 4.500e-11 Identity = 44/130 (33.85%), Postives = 72/130 (55.38%), Query Frame = 2
Query: 110 MQVGEAKALHTTKRSSGIDVSDPSLGEAWASIRTDGEPQTNWCAFTYAEGSNSVINLLGSGTGGVPELCSILLDSMVAFCGVRVGDDKGSARFHRILFVGEEVGGMKKGRAALAKNAVFAVFEGASGGDH 499
M GEA+AL+ + +S ID+SDP+L +AWA + + ++ TYA S + + + G GG +L +L D V++ G+RV G+ +F + VG VG M +G+AA+ + + F G + G H
Sbjct: 1 MLQGEARALYDVRPASDIDLSDPTLRDAWARVLRG---KCDFLLLTYAPLSKTRLAVKAKGAGGPEQLAPLLADDAVSYAGLRVRVG-GAEKFVFVAHVGVSVGAMLRGKAAMHRQDAESFFHGTAAGIH 126
BLAST of mRNA_Ecto-sp13_S_contig93.20890.1 vs. uniprot
Match: A0A8J2SVQ3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SVQ3_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 1.380e-5 Identity = 37/128 (28.91%), Postives = 62/128 (48.44%), Query Frame = 2
Query: 116 VGEAKALHTTKRSSGIDVSDPSLG---EAWASIRTDGEPQTNWCAFTYAEGSNSVINLLGSGTGGVPELCSILLDSMVAFCGVRVGDDKGSARFHRILFVGEEVGGMKKGRAALAKNAVFAVFEGASG 490
+ E A + G+ +D ++ + WA +R D W + L G+G PEL + L ++ V FCG+ G + +F+ +L+VG +VG +K+ +A L K+AVF GA+G
Sbjct: 1 MAETYARMDKSSADGMKTADAAVAAVVDGWARVRDDSMSNVEWVVYVL---DGKTYRLAAEGSGR-PELVAALDEAAVNFCGLLDGPAN-ARKFYHLLYVGADVGIIKRNKAQLQKSAVFNAMPGAAG 123
BLAST of mRNA_Ecto-sp13_S_contig93.20890.1 vs. uniprot
Match: A0A6A6QVM1_9PEZI (Actin depolymerizing protein n=1 Tax=Lophium mytilinum TaxID=390894 RepID=A0A6A6QVM1_9PEZI) HSP 1 Score: 54.3 bits (129), Expect = 5.030e-5 Identity = 31/105 (29.52%), Postives = 56/105 (53.33%), Query Frame = 2
Query: 161 IDVSDPSLGEAWASIRTDGEPQTNWCAFTYAEGSNSVINLLGSGTGGVPELCSILLDSMVAFCGVRV--GDDKGSAR--FHRILFVGEEVGGMKKGRAALAKNAV 463
+++ P + A+ASIR++ P+ NW +YA ++ + L +GTGG+ +L + LLD + +RV +D S R F ++++GE M+K + V
Sbjct: 1 MNIDTPEILAAYASIRSETSPE-NWLLLSYASPNSDTLTLTATGTGGIEDLKTHLLDDQAQYAYIRVEYANDSESTRVKFALVIWIGENTRVMRKAKVGFQSGEV 104
BLAST of mRNA_Ecto-sp13_S_contig93.20890.1 vs. uniprot
Match: A0A7S4HCW9_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HCW9_9EUKA) HSP 1 Score: 54.3 bits (129), Expect = 6.800e-5 Identity = 39/116 (33.62%), Postives = 55/116 (47.41%), Query Frame = 2
Query: 152 SSGIDVSDPSLGEAWASIRTDGEPQTNWCAFTYAEGSNSVINLLGSGTGGVPELCSILLDSMVAFCGVRV--GDDKGSARFHRILFVGEEVGGMKKGRAALAKNAVFAVFEGASGG 493
+S +D+SDP + AWA W A Y EG + + L SGT G L + L + V + RV + +++F + +GE GGM KGRA V A EG +GG
Sbjct: 19 ASAVDMSDPEIAAAWAECVGSAPQVGAWIALGY-EGK-AKLKRLASGTDGYRGLRAHLAEDAVVYGAFRVTTAGESTASKFTFVTSIGENAGGMVKGRATAHAQCVEAGLEGTAGG 132
BLAST of mRNA_Ecto-sp13_S_contig93.20890.1 vs. uniprot
Match: A0A6A6YYJ6_9PEZI (Actin depolymerizing protein n=1 Tax=Mytilinidion resinicola TaxID=574789 RepID=A0A6A6YYJ6_9PEZI) HSP 1 Score: 53.9 bits (128), Expect = 6.840e-5 Identity = 31/105 (29.52%), Postives = 56/105 (53.33%), Query Frame = 2
Query: 161 IDVSDPSLGEAWASIRTDGEPQTNWCAFTYAEGSNSVINLLGSGTGGVPELCSILLDSMVAFCGVRV--GDDKGSAR--FHRILFVGEEVGGMKKGRAALAKNAV 463
+++ P++ A+AS+R + P+ NW +YA ++ + L +G+GG+ EL + LLD + +RV +D S R F I+++GE M+K + V
Sbjct: 1 MNIDTPAIQAAYASVRAESSPE-NWLLLSYASPTSDALTLTATGSGGLEELKTHLLDDQAQYAYLRVEYANDSESTRVKFALIIWIGERTRVMRKAKVGFQSGEV 104
BLAST of mRNA_Ecto-sp13_S_contig93.20890.1 vs. uniprot
Match: A0A0L0D7T4_THETB (Cofilin/tropomyosin-type actin-binding protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D7T4_THETB) HSP 1 Score: 56.2 bits (134), Expect = 9.060e-5 Identity = 38/107 (35.51%), Postives = 58/107 (54.21%), Query Frame = 2
Query: 164 DVSDPSLGEAWASIRTDGEPQTNWCAFTYAEGSNSVINLLGSGTGGVPELCSILLDSMVAFCGVRVGD-DKGSAR--FHRILFVGEEVGGMKKGRAALAKNAVFAVF 475
DVS+P++ A +++DG TNW A Y S + + +G GG EL + L D + + +R+ D D+ S R F I +VG+ VGGM +GR + K +V F
Sbjct: 3 DVSNPAISAAVDDVKSDGSA-TNWLALGYE--SKKKLQVDATGEGGYDELMAFLTDDKITYALLRLTDGDQESQRIKFVAITWVGQNVGGMARGRVTVHKPSVTEAF 106 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig93.20890.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig93.20890.1 >prot_Ecto-sp13_S_contig93.20890.1 ID=prot_Ecto-sp13_S_contig93.20890.1|Name=mRNA_Ecto-sp13_S_contig93.20890.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=146bp MQVGEAKALHTTKRSSGIDVSDPSLGEAWASIRTDGEPQTNWCAFTYAEGback to top mRNA from alignment at Ecto-sp13_S_contig93:32732..35777- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig93.20890.1 ID=mRNA_Ecto-sp13_S_contig93.20890.1|Name=mRNA_Ecto-sp13_S_contig93.20890.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3046bp|location=Sequence derived from alignment at Ecto-sp13_S_contig93:32732..35777- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig93:32732..35777- >mRNA_Ecto-sp13_S_contig93.20890.1 ID=mRNA_Ecto-sp13_S_contig93.20890.1|Name=mRNA_Ecto-sp13_S_contig93.20890.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=438bp|location=Sequence derived from alignment at Ecto-sp13_S_contig93:32732..35777- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |