mRNA_Ecto-sp13_S_contig93.20889.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig93.20889.1 vs. uniprot
Match: A0A6H5L640_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L640_9PHAE) HSP 1 Score: 476 bits (1225), Expect = 2.140e-156 Identity = 272/317 (85.80%), Postives = 280/317 (88.33%), Query Frame = 2
Query: 1529 KKTTGTKPRQTPTVAAGVPQGETRAPFSVDKTGASKAWQSRKVKKDGDSTDGGDKNSSXXXXRGSNGGEDNRGEAPKCNATREDLPTTVSVETTVSPLPSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAASGGRRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEAAGTGTVGDGVGNGVAGELGVGSAPTKHGRDPAWQKVSPKLLAASPEQEQXXXXXXXXXXXXEERPSKRSRPPAAPNSTPRSESPIMEEDLSRVLDGPSSNRVA 2479
KKTT TKPRQTP VAAGVPQGETRAP SVDKTGA+ AWQSRK K DG STDGGDKNSS RGSNGG+DNRGEA K NATREDLPTTVSVETTVS LPSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAA SGG RRPRAPSRRALEASGQLKHDGAQWMTRERKAEEAR KAELREQRRQYKAAG KSGVVLEAFVA+AAGTGTVGDGVG GVAG++GVGSA TKHGRDPAWQKVSP++LAAS EQEQ E+RPSKR RPPAAPNSTPRSESP M EDLS VLDGPSSNRVA
Sbjct: 7 KKTTDTKPRQTPAVAAGVPQGETRAPSSVDKTGANNAWQSRKAKNDGYSTDGGDKNSSSKKRRGSNGGKDNRGEASKGNATREDLPTTVSVETTVSSLPSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAXSGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARIKAELREQRRQYKAAGFKSGVVLEAFVAKAAGTGTVGDGVGGGVAGKIGVGSATTKHGRDPAWQKVSPEMLAASAEQEQATEKEELLSASAEKRPSKRPRPPAAPNSTPRSESPNMVEDLSGVLDGPSSNRVA 323
BLAST of mRNA_Ecto-sp13_S_contig93.20889.1 vs. uniprot
Match: D8LEM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM4_ECTSI) HSP 1 Score: 471 bits (1213), Expect = 7.460e-154 Identity = 272/318 (85.53%), Postives = 277/318 (87.11%), Query Frame = 2
Query: 1526 SKKTTGTKPRQTPTVAAGVPQGETRAPFSVDKTGASKAWQSRKVKKDGDSTDGGDKNSSXXXXRGSNGGEDNRGEAPKCNATREDLPTTVSVETTVSPLPSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAASGGRRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEAAGTGTVGDGVGNGVAGELGVGSAPTKHGRDPAWQKVSPKLLAASPEQEQXXXXXXXXXXXXEERPSKRSRPPAAPNSTPRSESPIMEEDLSRVLDGPSSNRVA 2479
SKKTTGT PRQ PTVAAGVPQGE RAP +VDKTGA+KAWQ RK KD DSTDGGDKNSS RGSNGG+DNRGE K NATREDLPTTVSVETTVS L SPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQARE AKKEAAASGG RRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEAAGTGT GDGVG GVAGELGVGSA TKHGRDPAWQKVSP +LAASPEQEQ E RPSKR RPPAAPNSTPRSESP M EDLS +LDGPSSN VA
Sbjct: 56 SKKTTGTTPRQAPTVAAGVPQGEARAPSNVDKTGANKAWQGRKATKDRDSTDGGDKNSSSKKRRGSNGGKDNRGEVSKVNATREDLPTTVSVETTVSSLRSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREVAKKEAAASGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEAAGTGTAGDGVGGGVAGELGVGSATTKHGRDPAWQKVSPGILAASPEQEQATEQEETLSPSSE-RPSKRPRPPAAPNSTPRSESPNMVEDLSGILDGPSSNGVA 372
BLAST of mRNA_Ecto-sp13_S_contig93.20889.1 vs. uniprot
Match: A0A6H5LLY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLY6_9PHAE) HSP 1 Score: 360 bits (924), Expect = 6.440e-108 Identity = 276/675 (40.89%), Postives = 350/675 (51.85%), Query Frame = 2
Query: 404 MGGNPMASASPFKVDQMAPSFHPSQREAPAARXXXXXXXXXXXSLRVAPCSGQDLGQAQEGAIPSTAGQPGRQTCEHTDGKRAAGTVEDPDLYPLWPTPAGSAVAEKAPCKSWSAAPQPGAVGSPLVSPCPTSSALAATPAAKALVARTPVGCQYPGCERKAKYGPKDEPPRACQAHKRAGQYTTNRHGDLYKATRDGDAFRTPAVVTTAGSPRPRTGNTGKYLTSDQSGLPSKAYSVNPSSSPLPKAPKMPCNTVPGLKPSDQSGLPSKDSGNSSFXXXXXXXXXXXXXXXXXXXXSRPGISTGRNDGRQSLQKRDCLFPGCRARPTHGLPGAVRAVYCGSHKKGVMVHLYEDSPDVSNNATAAGSTTAGVIPSKKTTGTKPRQTPTVAAGVPQG---------------ETRAPFSVDKTGASKAWQSRKVKKDGDSTDGGDKNSSXXXXRGSNGGEDNRGEAPKCNATREDLPTTVSVETTVSPLPSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAASGGRRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEAAGTGTVGDGVGNGVAGELGVGSAPTKHGRDPAWQKVSPKLLAASPEQEQXXXXXXXXXXXXEERPSKRSRP 2383
M N S + + P ++ + P+ R R AP SGQD AQ ++ P A G E P YPL P P AV ++A S+A PG G P++S P+SSA + P AK L PV CQ+ GC A+YGP D PP CQ HKR GQ+TTNRHG L++ATR+G+AFR A T A SP P + N G SDQS LPS S PSSS PK P K SG +RPG+S G N QS + CLFPGC ARP +GLPGA RAVYC SHKKG MV L++++P + ++A K TTG Q PT ++ + RAP ++D+ GA A + R+ ++ ++ DG + S + S+GG+D RG T E+L T + + S LPSP AA KP S P NR D++GMAPSVEF +LRQARE AK EA ASG RRPRAPSRRALEA+G+LK GAQWM+RE+KAE+ R KAELR QR++Y+AAGLKSGVVLE FV A GT GDG+ G G A T G +P WQKVSP+ L+A+ ++ ++PSK+ RP
Sbjct: 1 MDDNVATSTAQATDKKKLPVYNHRTNDDPSTRSASLSSASSCSCSRAAPYSGQDQFDAQPANSSVSSNGPALHAINAPGQAAATGAKEGPGPYPLRPRPTHGAVVKQALSVLKSSASHPGRAGMPVLSASPSSSAHTSVPPAKELP--IPVRCQHRGCSNLARYGPLDSPPCTCQLHKRVGQFTTNRHGALFRATREGNAFRKLAAAT-AKSPPPCSINKGNLAASDQSRLPSTGSSGAPSSSSHPK--------------------PGKTSGTRG---------------QVLKRANRPGLSGGNNRESQSSRDSACLFPGCDARPDYGLPGATRAVYCFSHKKGPMVQLFKETPALPDSA------------GKATTGKPRSQVPTESSXXXXXXXXXXXXXXXXXGAKKKRAPRNIDRNGAKNARRGRQETEEDNNADGSGTHKSE---KRSSGGKDERGAISSSTVTGENL-TKTTAKPAASSLPSPAPAAEPKPPSFPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRLQRKRYQAAGLKSGVVLEMFVPAATGTEAAGDGIEERDGEVRGEGGATTPIGSNPGWQKVSPETLSAASPKQHSTGQRRESSVGTGQKPSKQVRP 621
BLAST of mRNA_Ecto-sp13_S_contig93.20889.1 vs. uniprot
Match: A0A6H5L360_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L360_9PHAE) HSP 1 Score: 354 bits (909), Expect = 9.520e-106 Identity = 275/658 (41.79%), Postives = 347/658 (52.74%), Query Frame = 2
Query: 458 PSFHPSQREAPAARXXXXXXXXXXXSLRVAPCSGQDLGQAQEGAIPSTAGQPGRQTCEHTDGKRAAGTVEDPDLYPLWPTPAGSAVAEKAPCKSWSAAPQP----------GAVGSPLVSPCPTSSALAATPAAKALVARTPVGCQYPGCERKAKYGPKDEPPRACQAHKRAGQYTTNRHGDLYKATRDGDAFRTPAVVTTAGSPRPRTGNTGKYLTSDQSGLPSKAYSVNPSSSPLPKAPKMPCNTVPGLKPSDQSGLPSKDSGNSSFXXXXXXXXXXXXXXXXXXXXSRPGISTGRNDGRQSLQKRDCLFPGCRARPTHGLPGAVRAVYCGSHKKGVMVHLYEDSPDVSNNATAAGSTTAGVIPSKKTTGTKPRQTPTVAAGVPQGETRAPFSVDKTGASKAWQSRKVKKDGDSTDGGDKNSSXXXXRGSNGGEDNRGEAPKCNATREDLPTTVSVETTVSPLPSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAASGGRRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEAAGTGTVGDGVGNGVAGELGVGSAPTKHGRDPAWQKVSPKLLAASPEQEQXXXXXXXXXXXXEERPSKRSRPPAAPNS 2401
P ++ + P+ R S RV P SGQD AQ ++ P AAGT E YPL P P AV ++A S+A QP G G ++S P+S A A P AK P+ CQ+ GC A+YGP D PPRACQ HKR GQ+TTNRHG L++ATR+G+AFR A T SP P + N G + SDQS LPS S SSS PK P + SG + +R GIS G N G QS + R CLFPGC ARP +GLPGA RA+YC +HKK MV L+++ P + N A G+ T G K++ G V +TRAP ++D+ GA KA + + ++ + D G K++S R S GG+D RG T E+L T +V+T+ S LP P A P SS NR D++GMAPSVEF +LRQAREAAK EA ASG RRPRAPSRRALEA+G+LK GAQWM+RE+KAE+ R KAELR QR+QY+AAGLKSGVVLE FV A GT GDG+ G G A T G +P W KVSP+ L+A ++ ++PSK++R A S
Sbjct: 19 PVYNNRTNDVPSTRSSSSSPTSSCSSSRVTPYSGQDQLDAQLANSSVSSESPALHDLNTPGQAAAAGTKEGSGPYPLRPRPTHGAVVKQALSIFKSSASQPSXXXXXXXXXGGPGVRVLSTSPSSPAHTAVPPAKE--PPIPMHCQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTNRHGALFRATREGNAFRKLAAATVK-SPPPCSINKGDLVASDQSRLPSTGSSGASSSSSHPK-------------PEETSGTRGQ----------------------VLKRANRQGISGGHNGGSQSSRNRTCLFPGCDARPDYGLPGATRAMYCFAHKKAPMVQLFKELPALPNKA---GNATTG----KRSQGPAAXXXXXXXXSVGANKTRAPSNIDRNGAKKARRGPQETEEDNDVDSGGKHTSKK--RRSTGGKDERGGISSAKVTGENL-TKPTVKTSASSLPPPAPAFEPNPPSSSNNRLADSSGMAPSVEFLVLRQAREAAKTEAEASGLGRRPRAPSRRALEAAGRLKGIGAQWMSREKKAEDLRLKAELRLQRKQYQAAGLKSGVVLEMFVPAATGTEAAGDGIEQRDGEVRGEGGATTPRGSNPGWHKVSPEALSAPSSKQHGSGQGKGSSVGRRQKPSKQARSTAVAES 628
BLAST of mRNA_Ecto-sp13_S_contig93.20889.1 vs. uniprot
Match: D7G0V0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V0_ECTSI) HSP 1 Score: 266 bits (681), Expect = 2.410e-76 Identity = 178/373 (47.72%), Postives = 228/373 (61.13%), Query Frame = 2
Query: 1295 SRPGISTGRNDGRQSLQKRDCLFPGCRARPTHGLPGAVRAVYCGSHKKGVMVHLYEDSPDVSNNATAAGSTTAGVIPSKKTTGTKPRQTPT----VAAGVPQGETRAPFSVDKTGASKAWQSRKVKKDGDSTDGGDKNSSXXXXRGSNGGEDNRGEAPKCNATREDLPTTVSVETTVSPLPSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAASGGRRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEAAGTGTVGDGVGNGVAGELGVGSAPTKHGRDPAWQKVSPKLLAASPEQEQXXXXXXXXXXXXEERPSKRSRPPAAPNS 2401
+RPG+S G N G QS + R CLFPGC ARP +GLPGA RAVYC SHKKG MV L++++P + +N P K TTG Q PT AA V RAP ++D+ A KA R+ +++ + + D + + + S+GG+D RG E+L T + +T+ PSP AA P SSP NR D++GMAPSVEF +LRQARE AK EA ASG RRPRAPSRRALEA+G+LK GAQWM+RE+KAE+ R KAELR+QR+QY+AAGLKSGVVLE FV EA GT GDG+ G G A T G +P WQKVSP++L+A ++ ++PSK++R A S
Sbjct: 33 NRPGLSGGHNGGSQSSRNRSCLFPGCDARPDYGLPGATRAVYCFSHKKGPMVQLFKETPALPDN------------PGKATTGKPRSQAPTEPAAAAASVGTKNPRAPSNIDRNAAKKA---RRGQQETEEDNDADVSGTHRSKKRSSGGKDERGAISSSTVAGENL-TKTTAKTSAPSFPSPAPAAEANPPSSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPEATGTEAAGDGIEERDGEVRGEGGATTLRGSNPGWQKVSPEVLSAPSSKQHGTGQREETSVGRGQKPSKQARSTAVAES 389
BLAST of mRNA_Ecto-sp13_S_contig93.20889.1 vs. uniprot
Match: A0A6H5KYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYF0_9PHAE) HSP 1 Score: 247 bits (630), Expect = 2.230e-68 Identity = 197/487 (40.45%), Postives = 251/487 (51.54%), Query Frame = 2
Query: 758 PGAVGSPLVSPCPTSSALAATPAAKALVARTPVGCQYPGCERKAKYGPKDEPPRACQAHKRAGQYTTNRHGDLYKATRDGDAFRTPAVVTTAGSPRPRTGNTGKYLTSDQSGLPSKAYSVNPSSSPLPKAPKMPCNTVPGLKP-SDQSGLPSKDSGNSSFXXXXXXXXXXXXXXXXXXXXSRPGISTGRNDGRQSLQKRDCLFPGCRARPTHGLPGAVRAVYCGSHKKGVMVHLYEDSPDVSNNATAAGSTTAGVIPSKKTTGTKPRQTPTVAAGVPQGETRAPFSVDKTGASKAWQSRKVKKDGDSTDGGDKNSSXXXXRGSNGGEDNRGEAPKCN-------ATREDLPTTVSVETTVSPLPSPTSAAATKP-----------LSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAASGGRRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFV 2161
PG + +SP PTS T + K L A T C+YPGC + AKYG +D PP CQAHKRAGQYTTNRHG+L ATRDGDAFRTPAV +P A +V PS + + + G + S Q S S SS SRPG S+ R++ ++ Q CLFP C ARP +GLPGA RA YC SHKKG MV L+ ++P V+N+ V P+ T G + +Q G T D+ GA KA + +K+D +K ++ G G + R K N A+ + T + T+ SP + + KP + P S + GMAPSVE +LRQAREAAK EA ASG RRPRAPSRRALEASG+L+ DGAQWMTRE+KAE+AR +ELR++R++ + AGLK GVVLEAFV
Sbjct: 32 PGVSPASSMSPPPTS-----TSSPKTLQAPTAPRCEYPGCPKSAKYGLRDAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVA-----------------------VPVPAVTVPPSPA---------SSEIAGTEAASAQPRRRSTGSTGSSVPSHRKPKAKLSSSVHALKRKSRPGTSSSRHEESRAPQYHSCLFPECGARPIYGLPGAARAAYCFSHKKGSMVDLFSEAPAVNNHEAKR------VTPAAPTEGKRKKQKKGHEERKMTGMT-----ADQRGAKKARRESSIKED-------NKGATSKDDGGHRGAKKIRDNKTKVNGGMGASEASVGAIVTAAAAGTSEMSTKSPAAKPSVKPTRKVKEPADTIVPPPQPTSRPSDGMAPSVEMLILRQAREAAKTEAEASGSGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNSELRKKRKESREAGLKVGVVLEAFV 463
BLAST of mRNA_Ecto-sp13_S_contig93.20889.1 vs. uniprot
Match: D8LGW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW8_ECTSI) HSP 1 Score: 241 bits (614), Expect = 3.490e-66 Identity = 194/489 (39.67%), Postives = 248/489 (50.72%), Query Frame = 2
Query: 758 PGAVGSPLVSPCPTSSALAATPAAKALVARTPVGCQYPGCERKAKYGPKDEPPRACQAHKRAGQYTTNRHGDLYKATRDGDAFRTPAVVTTAGSPRPRTGNTGKYLTSDQSGLPSKAYSVNPSSSPLPKAPKMPCNTVPGLKP-SDQSGLPSKDSGNSSFXXXXXXXXXXXXXXXXXXXXSRPGISTGRNDGRQSLQKRDCLFPGCRARPTHGLPGAVRAVYCGSHKKGVMVHLYEDSPDVSNNATAAGSTTAGVIPSKKTTGTKPRQTPTVAAGVPQGETRAPFSVDKTGASKAWQSRKVKKDGD---STDGGDKNSSXXXXRGSNGGEDNRGEAPKCNATREDLPTTVSVETTVSPLPSPTSAAATKP--------------LSSPP---NRSGDTAGMAPSVEFHLLRQAREAAKKEAAASGGRRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFV 2161
PG + +SP PTS T + K L+A C+YPGC + AKYG +D PP CQAHKRAGQYTTNRHG+L ATRDGDAFRTPAV +P A +V PS + + + G++ S Q S S S +RP S+ ++ +LQ R CLFPGC ARPT+GLPGA RAVYC SHKKG MV+L+ +P V+NN + A +K + D+ GA KA + +K+D S DGG +G+ DN + + T E ++ T ++A KP ++ PP NR + GM+PSVE +LRQAREAAKKEA ASGG RR RAPSRRALEASG+L+ DGAQWMTRE++AE+AR ELRE+R++ + AGL GVVLEAFV
Sbjct: 32 PGVSPTSSLSPPPTS-----TSSPKTLLAPKAPRCEYPGCPKYAKYGLRDAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVA-----------------------VPVLAVTVPPSPA---------SSEIAGMEAASAQPRRRSTGSSGSLVPSHRKPKAKLSSSVHTLKRKNRPEPSSSGHEESPALQNRSCLFPGCDARPTYGLPGAARAVYCFSHKKGSMVNLFSQAPAVNNNEEKRVTAVAPTEGKRKKX-----------XXXXXXXXXXSMTADQRGAKKARRESSIKEDNKGATSKDGG-------GYQGAKKIRDNEKKVNRGVGTSERSVGAIATAAAAGTSEMSTKSSAAKPPVKSTHIAKEPADTMALPPQPTNRPSE--GMSPSVEMLILRQAREAAKKEAEASGGGRRARAPSRRALEASGRLRGDGAQWMTREKRAEQARVNTELREKRKKSREAGLTVGVVLEAFV 463
BLAST of mRNA_Ecto-sp13_S_contig93.20889.1 vs. uniprot
Match: A0A6H5KLI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLI4_9PHAE) HSP 1 Score: 245 bits (625), Expect = 6.550e-66 Identity = 191/455 (41.98%), Postives = 241/455 (52.97%), Query Frame = 2
Query: 860 CQYPGCERKAKYGPKDEPPRACQAHKRAGQYTTNRHGDLYKATRDGDAFRTPAVVTTAGSPRPRTGNTGKYLTSDQSGLPSKAYSVNPSSSPLPKAPKMPCNTVPGLKPSDQSGLPSKDSGNSSFXXXXXXXXXXXXXXXXXXXXSRPGISTGRNDGRQSLQKRDCLFPGCRARPTHGLPGAVRAVYCGSHKKGVMVHLYEDSPDVSNNATAAGSTTAGVIPSKKTTGTKPRQTPTVAAGVPQGETRAPFSVDKTGASKAWQSRKVKKDGDST----DGG--------DKNSSXXXXRGSNGGEDNRGEAPKCNATREDLPTTVSVETTVS-PLPSPTSAA-----ATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAASGGRRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEA 2170
C+YPGC + AKYG ++ PP CQAHKRAGQYTTNRHG+L ATRDGDAFRTPAV +P A +V PS P + ++ +P +S S SS +RPG S+ R++ + + R CLFPGC ARPTHGLPGA RAVYC SHKKG MV L+ ++ V+N+ + V + T G K +QT G T D+ GA +A + + + T DGG D + G++GG T E +SV++ + PL TS A T P P +R D GMAPSVE +LRQAREAAK EA ASG RRPRAPSRRALEASG+L+ DGAQWMTRE+KAE+AR +ELR++R++ + AGLK GVVLEAFV A
Sbjct: 115 CEYPGCPKSAKYGLREAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVA-----------------------VPVPAVTVPPS----PASSEIAGTEAASARPRRRS----TGSSGSSVPSHRKPKENLSSSVHTLKRKNRPGTSSSRHEESPAPKNRSCLFPGCGARPTHGLPGAARAVYCFSHKKGSMVDLFSEALAVNNHEEKS------VTSAAPTEGKKKKQTQAKKEREMTGMT-----ADQRGAKQARRESSIMEGNKGTTSKDDGGHRGAKKIRDNETKVNRGMGASGGSVGAIATAAAAGTSE-----MSVKSPAAKPLVKSTSEAKEPADTTAPPPQPTSRPSD--GMAPSVEMLILRQAREAAKTEAEASGSGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNSELRKKRKESREAGLKVGVVLEAFVPRA 520
BLAST of mRNA_Ecto-sp13_S_contig93.20889.1 vs. uniprot
Match: D7G0U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U7_ECTSI) HSP 1 Score: 234 bits (596), Expect = 1.210e-64 Identity = 176/424 (41.51%), Postives = 222/424 (52.36%), Query Frame = 2
Query: 860 CQYPGCERKAKYGPKDEPPRACQAHKRAGQYTTNRHGDLYKATRDGDAFRTPAVVTTAGSPRPRTGNTGKYLTSDQSGLPSKAYSVNPSSSPLPKAPKMPCNTVPGLKPSDQSGLPSKDSGNSSFXXXXXXXXXXXXXXXXXXXXSRPGISTGRNDGRQSLQKRDCLFPGCRARPTHGLPGAVRAVYCGSHKKGVMVHLYEDSPDVSNNATAAGSTTAGVIPSKKTTGTKPRQTPTVAA-----GVPQGETRAPFSVDKTGASKAWQSRKVKKDGDSTDGGDKNSSXXXXRGSNGGEDNRGEAPKCNATREDLPTTVSVETTVSPLPSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAASGGRRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQY 2116
CQ+ GC A+YGP D PPRACQ HKR GQ+TT+RHG L++ATR+G+AFR A T P PC+ G SG SS S P GR S + GC ARP +GLPGA RAVYC SHKKG MV L+++ P + N A A S A V+ K TTG K Q P V +TRAP +D+ G+ KA R+ +++ + + D + + + +GG+D RG T+E+L T + +T+ LPSP AA P SSP NR D++GMAPSVEF +LRQARE AK EA ASG RRPRAPSRRALEA+G+LK GAQWM+RE+KAE+ R KAELR+QR+QY
Sbjct: 3 CQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRHGALFRATREGNAFRELAAATVKSPP--------------------------------------PCSIFKG------------SSGRSS-------------------SSSHP------MPGRTSATR------GCEARPDYGLPGATRAVYCFSHKKGPMVQLFKEPPSLPNKAGQAESAAAPVVTRKATTG-KRSQGPAXXXXXXXXSVGAKKTRAPSDIDRNGSKKA---RRGQQETEEDNDADVSGTHRSKKRRSGGKDERGAISSAQVTKENL-TKTTAKTSAPSLPSPAPAAEANPPSSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRVKAELRQQRKQY 340
BLAST of mRNA_Ecto-sp13_S_contig93.20889.1 vs. uniprot
Match: D8LH07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH07_ECTSI) HSP 1 Score: 179 bits (453), Expect = 1.210e-45 Identity = 160/412 (38.83%), Postives = 202/412 (49.03%), Query Frame = 2
Query: 983 ATRDGDAFRTPAVVTTAGSPRPRTGNTGKYLTSDQSGLPSKAYSVNPSSSPLPKAPKMPCNTVPGLKP-SDQSGLPSKDSGNSSFXXXXXXXXXXXXXXXXXXXXSRPGISTGRNDGRQSLQKRDCLFPGCRARPTHGLPGAVRAVYCGSHKKGVMVHLYEDSPDVSNNATAAGSTTAGVIPSKKTTGTKPRQTPTVAAGVPQGETRAPFSVDKTGASKAWQSRKVKKDGDSTDGGDKNSSXXXXRGSNGGEDNRGEAPKCN-------ATREDLPTTVSVETT--------VSPLPSPTSAAA--TKPLSSPPN-RSGDTAGMAPSVEFHLLRQAREAAKKEAAASGGRRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFV 2161
ATRDGDAFRTPAV +P+ ++P+SS + G + S Q S S S +RPG S+ ++ + Q R CLFPGC ARP +GLPGA AVYC SHKKG MV+L+ +P V+N+ V P+ T G + G T D+ GA KA + +K+D +K ++ G G + NRG K N + D+ T + T+ PL TS A ++ PP S + GMAPSVE +LRQAREAAK EA ASGG RR RAPSRRALEASGQLK DGAQWMTRE+KAE+AR ELRE+R++ + AGLK GVVLEAFV
Sbjct: 2 ATRDGDAFRTPAVAVP---------------------VPAVTVPLSPASS-----------EIAGTEAASAQPRRRSTGSSGPSVPSQCKPKAKLSSSVHTLKRKNRPGTSSSGHEESPAPQNRPCLFPGCGARPIYGLPGAAHAVYCFSHKKGSMVNLFSRAPAVNNHEEKM------VTPAAPTEGKRKXXXXXXXXRKMTGMT-----ADQRGAKKARRESSIKED-------NKGATSKDDGGHRGAKKNRGNETKVNRGTGASEGSVGDVATAAAAGTSEMSTKLPAAKPLVKLTSKAEEPADTMAPPPQPTSRPSEGMAPSVEMLILRQAREAAKTEAEASGGGRRARAPSRRALEASGQLKGDGAQWMTREKKAEQARVNTELREKRKKSREAGLKVGVVLEAFV 363 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig93.20889.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig93.20889.1 >prot_Ecto-sp13_S_contig93.20889.1 ID=prot_Ecto-sp13_S_contig93.20889.1|Name=mRNA_Ecto-sp13_S_contig93.20889.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=693bp MGGNPMASASPFKVDQMAPSFHPSQREAPAARPSSPPSSSPSSSLRVAPCback to top mRNA from alignment at Ecto-sp13_S_contig93:25981..32784+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig93.20889.1 ID=mRNA_Ecto-sp13_S_contig93.20889.1|Name=mRNA_Ecto-sp13_S_contig93.20889.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6804bp|location=Sequence derived from alignment at Ecto-sp13_S_contig93:25981..32784+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig93:25981..32784+ >mRNA_Ecto-sp13_S_contig93.20889.1 ID=mRNA_Ecto-sp13_S_contig93.20889.1|Name=mRNA_Ecto-sp13_S_contig93.20889.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2079bp|location=Sequence derived from alignment at Ecto-sp13_S_contig93:25981..32784+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |