prot_Ecto-sp13_S_contig929.20881.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig929.20881.1
Unique Nameprot_Ecto-sp13_S_contig929.20881.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length56
Homology
BLAST of mRNA_Ecto-sp13_S_contig929.20881.1 vs. uniprot
Match: D8LCG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCG0_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 3.490e-19
Identity = 39/52 (75.00%), Postives = 45/52 (86.54%), Query Frame = 0
Query:    1 MMVSGFNQRIVRSAWPASLQQLALLIGHKFRQSLQGLGTWMPNLETLRVLDW 52
            +M S FNQRI RSAWP SL++L L  GHKFRQSLQGLGTWMPNLE+LR+L+W
Sbjct:    2 IMRSEFNQRIGRSAWPPSLRRLTL--GHKFRQSLQGLGTWMPNLESLRLLEW 51          
BLAST of mRNA_Ecto-sp13_S_contig929.20881.1 vs. uniprot
Match: A0A6H5JRK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK5_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 2.310e-10
Identity = 29/51 (56.86%), Postives = 38/51 (74.51%), Query Frame = 0
Query:    1 MMVSGFNQRIVRSAWPASLQQLALLIGHKFRQSLQGLGTWMPNLETLRVLD 51
            +M+S FNQR+    WP S+++L L  GHKF++SLQGLGT MPNLE   +LD
Sbjct:  321 VMLSAFNQRVDMCEWPVSMRRLTL--GHKFKESLQGLGTRMPNLEAFHLLD 369          
BLAST of mRNA_Ecto-sp13_S_contig929.20881.1 vs. uniprot
Match: A0A6H5JUA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA5_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 1.290e-8
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    1 MMVSGFNQRIVRSAWPASLQQLALLIGHKFRQSLQGLGTWMPNLETLRVL 50
            ++ S FN+ I  SAWP ++ +L L  G  FRQSLQ LGTWMPNLET  +L
Sbjct:  249 VVTSKFNRXIGASAWPKAMHRLTL--GQNFRQSLQELGTWMPNLETFHLL 296          
BLAST of mRNA_Ecto-sp13_S_contig929.20881.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 1.830e-8
Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 MMVSGFNQRIVRSAWPASLQQLALLIGHKFRQSLQGLGTWMPNLETLRVLDW 52
            ++ + F+Q I  S  PA L++L L  GH FRQSLQGLGTWMPNLE L +L +
Sbjct:  327 VIFANFDQPIGSSVGPALLRRLVL--GHMFRQSLQGLGTWMPNLEVLHLLHY 376          
BLAST of mRNA_Ecto-sp13_S_contig929.20881.1 vs. uniprot
Match: A0A6H5JYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF0_9PHAE)

HSP 1 Score: 50.1 bits (118), Expect = 1.320e-5
Identity = 21/28 (75.00%), Postives = 23/28 (82.14%), Query Frame = 0
Query:   24 LLIGHKFRQSLQGLGTWMPNLETLRVLD 51
            L +GHKFRQSLQGLGTW+PNLE    LD
Sbjct:  330 LTLGHKFRQSLQGLGTWIPNLEIFHFLD 357          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig929.20881.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LCG0_ECTSI3.490e-1975.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRK5_9PHAE2.310e-1056.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUA5_9PHAE1.290e-856.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRF9_9PHAE1.830e-855.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYF0_9PHAE1.320e-575.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig929contigEcto-sp13_S_contig929:15385..15552 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig929.20881.1mRNA_Ecto-sp13_S_contig929.20881.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig929 15211..15708 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig929.20881.1 ID=prot_Ecto-sp13_S_contig929.20881.1|Name=mRNA_Ecto-sp13_S_contig929.20881.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=56bp
MMVSGFNQRIVRSAWPASLQQLALLIGHKFRQSLQGLGTWMPNLETLRVL
DWDTY*
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