prot_Ecto-sp13_S_contig9288.20879.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9288.20879.1
Unique Nameprot_Ecto-sp13_S_contig9288.20879.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length131
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9288.20879.1 vs. uniprot
Match: A0A6H5L2J9_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2J9_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 2.830e-21
Identity = 52/60 (86.67%), Postives = 55/60 (91.67%), Query Frame = 0 
Query:   20 TSCSRLLPLPPSPSWRLYAARRANPDXXXXXXDDRGRTDPPTMASGRPPVRGNAPASRGK 79
            T  SR+LPLPPSPSWRLYAARRANPDXXXXX DDRGRTDPPT+A GRPPVRGNAPASR +
Sbjct:  126 TPRSRVLPLPPSPSWRLYAARRANPDXXXXXYDDRGRTDPPTVAPGRPPVRGNAPASRAR 185
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9288.20879.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L2J9_9PHAE2.830e-2186.67SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..22
score: 7.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9288contigEcto-sp13_S_contig9288:5171..5563 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9288.20879.1mRNA_Ecto-sp13_S_contig9288.20879.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9288 5171..5563 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9288.20879.1 ID=prot_Ecto-sp13_S_contig9288.20879.1|Name=mRNA_Ecto-sp13_S_contig9288.20879.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=131bp
MQQHRRRRQPASAAAAASGTSCSRLLPLPPSPSWRLYAARRANPDDDDYY
YDDRGRTDPPTMASGRPPVRGNAPASRGKGRPGSGAGRGVGGSNNRGESS
SMASAGVGGGGRGRGIDQSDPLVRDWNSAKV
back to top