prot_Ecto-sp13_S_contig928.20872.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig928.20872.1
Unique Nameprot_Ecto-sp13_S_contig928.20872.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length171
Homology
BLAST of mRNA_Ecto-sp13_S_contig928.20872.1 vs. uniprot
Match: D7FKQ4_ECTSI (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKQ4_ECTSI)

HSP 1 Score: 333 bits (855), Expect = 1.090e-115
Identity = 168/169 (99.41%), Postives = 168/169 (99.41%), Query Frame = 0
Query:    2 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHKHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQFVQ 170
            ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTH HLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQFVQ
Sbjct:    2 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHSHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQFVQ 170          
BLAST of mRNA_Ecto-sp13_S_contig928.20872.1 vs. uniprot
Match: A0A836CIE5_9STRA (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIE5_9STRA)

HSP 1 Score: 281 bits (720), Expect = 4.140e-95
Identity = 133/167 (79.64%), Postives = 153/167 (91.62%), Query Frame = 0
Query:    2 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHKHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
            ANTLRPYL  IR TLDA+LCLRNFPSQTVERHNKPEVE +SSKELLLNP+TICRNEQE+CL+E+S+NSVRVSI VKQADEIE+ILC KFT FLMQR+EQF+VMRRK A G+DISFL+TH HLE +WKHKL+DF+I+FMEDIDKEISGMKIAINAR RI+A +++ QF
Sbjct:    2 ANTLRPYLTTIRHTLDASLCLRNFPSQTVERHNKPEVEVQSSKELLLNPITICRNEQERCLVESSINSVRVSIGVKQADEIESILCRKFTRFLMQRSEQFIVMRRKAAPGYDISFLITHAHLEGMWKHKLVDFVIEFMEDIDKEISGMKIAINARARIVASEYVRQF 168          
BLAST of mRNA_Ecto-sp13_S_contig928.20872.1 vs. uniprot
Match: A0A2D4BNX3_PYTIN (Actin-related protein 2/3 complex subunit 4 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BNX3_PYTIN)

HSP 1 Score: 271 bits (694), Expect = 3.660e-91
Identity = 132/167 (79.04%), Postives = 146/167 (87.43%), Query Frame = 0
Query:    2 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHKHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
            ANTL PYL AIR +LDAALCLRNFPSQ VERHNKPEVE R SKELLLNP+ I RNE EKCLIE S+NS RVSI +KQADEIETILCHKFT FLMQRAEQF++MRR P EG+ +SFL+TH HLE L+KHKLIDFIIQFMEDIDKEIS MKI++NARGRI+A +FM QF
Sbjct:    2 ANTLAPYLTAIRNSLDAALCLRNFPSQVVERHNKPEVELRLSKELLLNPILIARNENEKCLIEPSINSTRVSICIKQADEIETILCHKFTRFLMQRAEQFIIMRRVPVEGYHMSFLITHTHLESLYKHKLIDFIIQFMEDIDKEISEMKISLNARGRIVATEFMKQF 168          
BLAST of mRNA_Ecto-sp13_S_contig928.20872.1 vs. uniprot
Match: A0A067C4Y9_SAPPC (Actin-related protein 2/3 complex subunit 4 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C4Y9_SAPPC)

HSP 1 Score: 271 bits (693), Expect = 5.200e-91
Identity = 127/167 (76.05%), Postives = 146/167 (87.43%), Query Frame = 0
Query:    2 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHKHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
            ANTL PYLNAIR TLD ALCL+NFPSQ VERHNKPEVE R SKEL+L P+ ICRNE EKC IE S+NS RVSI +KQADEIE+ILCHKF+ FLMQRAEQF+++RRKP EG+D+SFL+TH HLE L+KHKL+DFIIQFMEDIDKEIS MKI +NARGR++A +FM QF
Sbjct:    2 ANTLAPYLNAIRATLDGALCLQNFPSQVVERHNKPEVEVRMSKELILTPIVICRNENEKCCIEPSINSARVSICIKQADEIESILCHKFSRFLMQRAEQFIILRRKPIEGYDMSFLITHSHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 168          
BLAST of mRNA_Ecto-sp13_S_contig928.20872.1 vs. uniprot
Match: K3WN29_GLOUD (Actin-related protein 2/3 complex subunit 4 n=27 Tax=Oomycota TaxID=4762 RepID=K3WN29_GLOUD)

HSP 1 Score: 268 bits (684), Expect = 1.180e-89
Identity = 130/167 (77.84%), Postives = 145/167 (86.83%), Query Frame = 0
Query:    2 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHKHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
            ANTL PYL AIR +LD+ALCLRNFPSQ VERHNKPEVE R SKELLLNP+ ICRNE EKCLIE SVNS RVSI +KQADEIETILCHKF  FLMQRA+QF++MRR P EG+D+SFLV H HLE ++KHKLIDFII FMEDIDKEIS MKI++NARGRI+A +FM QF
Sbjct:    1 ANTLAPYLTAIRHSLDSALCLRNFPSQVVERHNKPEVELRLSKELLLNPILICRNETEKCLIEPSVNSTRVSICIKQADEIETILCHKFNRFLMQRADQFIIMRRVPVEGYDMSFLVIHTHLENMYKHKLIDFIITFMEDIDKEISEMKISLNARGRIVATEFMKQF 167          
BLAST of mRNA_Ecto-sp13_S_contig928.20872.1 vs. uniprot
Match: W4GJL2_9STRA (Actin-related protein 2/3 complex subunit 4 n=5 Tax=Aphanomyces TaxID=100860 RepID=W4GJL2_9STRA)

HSP 1 Score: 268 bits (684), Expect = 1.270e-89
Identity = 128/167 (76.65%), Postives = 145/167 (86.83%), Query Frame = 0
Query:    2 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHKHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
            ANTL PYLNAIR TLDAALCL+NFPSQ VERHNKPE+E   S+ELLLNPV ICRNE EKC IE S+NS RVSI++KQADEIETILCHKF+ FLMQRAEQF++MRRK  EG+ ISFL+ H HLE L+KHKL+DFIIQFMEDIDKEIS MKI +NARGR++A +FM QF
Sbjct:    2 ANTLAPYLNAIRSTLDAALCLQNFPSQVVERHNKPEIEVGLSRELLLNPVVICRNENEKCCIEPSINSTRVSISIKQADEIETILCHKFSRFLMQRAEQFIIMRRKAIEGYSISFLIIHTHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 168          
BLAST of mRNA_Ecto-sp13_S_contig928.20872.1 vs. uniprot
Match: A0A024TP77_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TP77_9STRA)

HSP 1 Score: 268 bits (686), Expect = 3.310e-89
Identity = 128/167 (76.65%), Postives = 144/167 (86.23%), Query Frame = 0
Query:    2 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHKHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
            ANTL PYLNAIR TLD ALCL+NFPSQ VERHNKPEVE   S+ELLLNPV ICRNE E+C IE S+NS RVSI +KQADEIETILCHKF+ FLMQRAEQF++MRRKP EG+ ISFL+ H HLE L+KHKL+DFIIQFMEDIDKEIS MKI +NARGR++A +FM QF
Sbjct:   51 ANTLAPYLNAIRSTLDGALCLQNFPSQVVERHNKPEVEVGLSRELLLNPVVICRNENERCCIEPSINSTRVSICIKQADEIETILCHKFSRFLMQRAEQFIIMRRKPIEGYSISFLIVHTHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 217          
BLAST of mRNA_Ecto-sp13_S_contig928.20872.1 vs. uniprot
Match: A0A7S2BQQ1_9STRA (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQQ1_9STRA)

HSP 1 Score: 266 bits (679), Expect = 9.930e-89
Identity = 123/167 (73.65%), Postives = 147/167 (88.02%), Query Frame = 0
Query:    2 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHKHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
            A TLRPYLN IR TLDAALCLRNFPSQ VERHNKPE+E + +KELLLNP+TICR + E+CLIE SVNSVR+SI +KQADEIE +LCHKFT FLMQRA+QF++MRRK  EG+ ISFLVTH HLEK+WK+KLIDFII FMEDID+EIS MK+A+NAR R++A++F+ +F
Sbjct:   12 AATLRPYLNCIRSTLDAALCLRNFPSQIVERHNKPEIEIKGNKELLLNPITICRTKTERCLIEPSVNSVRISIQIKQADEIEEVLCHKFTRFLMQRADQFIIMRRKAKEGYSISFLVTHAHLEKMWKNKLIDFIISFMEDIDREISAMKLAVNARARVVAKEFLKEF 178          
BLAST of mRNA_Ecto-sp13_S_contig928.20872.1 vs. uniprot
Match: A0A3R6WI01_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6WI01_9STRA)

HSP 1 Score: 268 bits (686), Expect = 1.930e-88
Identity = 128/167 (76.65%), Postives = 144/167 (86.23%), Query Frame = 0
Query:    2 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHKHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
            ANTL PYLNAIR TLD ALCL+NFPSQ VERHNKPEVE   S+ELLLNPV ICRNE E+C IE S+NS RVSI +KQADEIETILCHKF+ FLMQRAEQF++MRRKP EG+ ISFL+ H HLE L+KHKL+DFIIQFMEDIDKEIS MKI +NARGR++A +FM QF
Sbjct:  104 ANTLAPYLNAIRSTLDGALCLQNFPSQVVERHNKPEVEVGLSRELLLNPVVICRNENERCCIEPSINSTRVSICIKQADEIETILCHKFSRFLMQRAEQFIIMRRKPIEGYSISFLIVHTHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 270          
BLAST of mRNA_Ecto-sp13_S_contig928.20872.1 vs. uniprot
Match: A0A7S2CG59_9STRA (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CG59_9STRA)

HSP 1 Score: 264 bits (675), Expect = 2.970e-88
Identity = 123/168 (73.21%), Postives = 148/168 (88.10%), Query Frame = 0
Query:    2 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHKHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQFV 169
            A+TL+PYL  +R TL+A LCLRNFPSQTVERHNKPEVE R SKELLLNP+TICR ++E+CLIE SVNSVR+SI +KQADE+E +LCHKFT FLMQRA+QF++MRRK  EG+ ISFLVTH HLEK+WK KLIDF+IQFMEDIDKEIS MK+A+N+R R +AQ+F+ +FV
Sbjct:    2 ASTLKPYLACVRTTLNAGLCLRNFPSQTVERHNKPEVEVRGSKELLLNPLTICRTDKERCLIEPSVNSVRISIQIKQADELEEVLCHKFTRFLMQRADQFIIMRRKAKEGYSISFLVTHAHLEKMWKDKLIDFVIQFMEDIDKEISAMKLAVNSRARNVAQEFVREFV 169          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig928.20872.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKQ4_ECTSI1.090e-11599.41Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
A0A836CIE5_9STRA4.140e-9579.64Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
A0A2D4BNX3_PYTIN3.660e-9179.04Actin-related protein 2/3 complex subunit 4 n=2 Ta... [more]
A0A067C4Y9_SAPPC5.200e-9176.05Actin-related protein 2/3 complex subunit 4 n=4 Ta... [more]
K3WN29_GLOUD1.180e-8977.84Actin-related protein 2/3 complex subunit 4 n=27 T... [more]
W4GJL2_9STRA1.270e-8976.65Actin-related protein 2/3 complex subunit 4 n=5 Ta... [more]
A0A024TP77_9STRA3.310e-8976.65Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A7S2BQQ1_9STRA9.930e-8973.65Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
A0A3R6WI01_9STRA1.930e-8876.65Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A7S2CG59_9STRA2.970e-8873.21Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034666Arp2/3 complex subunit 2/4GENE3D3.30.1460.20coord: 1..168
e-value: 3.1E-81
score: 272.8
IPR034666Arp2/3 complex subunit 2/4SUPERFAMILY69645Arp2/3 complex subunitscoord: 3..168
IPR008384Actin-related protein 2/3 complex subunit 4PFAMPF05856ARPC4coord: 2..165
e-value: 8.1E-80
score: 266.3
IPR008384Actin-related protein 2/3 complex subunit 4PIRSFPIRSF039100ARPC4coord: 1..170
e-value: 2.4E-83
score: 275.9
IPR008384Actin-related protein 2/3 complex subunit 4PANTHERPTHR22629ARP2/3 COMPLEX 20 KD SUBUNITcoord: 2..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig928contigEcto-sp13_S_contig928:10882..14918 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig928.20872.1mRNA_Ecto-sp13_S_contig928.20872.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig928 10882..14918 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig928.20872.1 ID=prot_Ecto-sp13_S_contig928.20872.1|Name=mRNA_Ecto-sp13_S_contig928.20872.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=171bp
QANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNP
VTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQ
FVVMRRKPAEGFDISFLVTHKHLEKLWKHKLIDFIIQFMEDIDKEISGMK
IAINARGRIIAQQFMLQFVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034666ARPC2/4
IPR008384ARPC4