mRNA_Ecto-sp13_S_contig928.20872.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig928.20872.1
Unique NamemRNA_Ecto-sp13_S_contig928.20872.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig928.20872.1 vs. uniprot
Match: D7FKQ4_ECTSI (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKQ4_ECTSI)

HSP 1 Score: 333 bits (855), Expect = 1.090e-115
Identity = 168/169 (99.41%), Postives = 168/169 (99.41%), Query Frame = 1 
Query:    4 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHKHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQFVQ 510
            ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTH HLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQFVQ
Sbjct:    2 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHSHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQFVQ 170
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BLAST of mRNA_Ecto-sp13_S_contig928.20872.1 vs. uniprot
Match: A0A836CIE5_9STRA (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIE5_9STRA)

HSP 1 Score: 281 bits (720), Expect = 4.140e-95
Identity = 133/167 (79.64%), Postives = 153/167 (91.62%), Query Frame = 1 
Query:    4 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHKHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 504
            ANTLRPYL  IR TLDA+LCLRNFPSQTVERHNKPEVE +SSKELLLNP+TICRNEQE+CL+E+S+NSVRVSI VKQADEIE+ILC KFT FLMQR+EQF+VMRRK A G+DISFL+TH HLE +WKHKL+DF+I+FMEDIDKEISGMKIAINAR RI+A +++ QF
Sbjct:    2 ANTLRPYLTTIRHTLDASLCLRNFPSQTVERHNKPEVEVQSSKELLLNPITICRNEQERCLVESSINSVRVSIGVKQADEIESILCRKFTRFLMQRSEQFIVMRRKAAPGYDISFLITHAHLEGMWKHKLVDFVIEFMEDIDKEISGMKIAINARARIVASEYVRQF 168
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BLAST of mRNA_Ecto-sp13_S_contig928.20872.1 vs. uniprot
Match: A0A2D4BNX3_PYTIN (Actin-related protein 2/3 complex subunit 4 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BNX3_PYTIN)

HSP 1 Score: 271 bits (694), Expect = 3.660e-91
Identity = 132/167 (79.04%), Postives = 146/167 (87.43%), Query Frame = 1 
Query:    4 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHKHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 504
            ANTL PYL AIR +LDAALCLRNFPSQ VERHNKPEVE R SKELLLNP+ I RNE EKCLIE S+NS RVSI +KQADEIETILCHKFT FLMQRAEQF++MRR P EG+ +SFL+TH HLE L+KHKLIDFIIQFMEDIDKEIS MKI++NARGRI+A +FM QF
Sbjct:    2 ANTLAPYLTAIRNSLDAALCLRNFPSQVVERHNKPEVELRLSKELLLNPILIARNENEKCLIEPSINSTRVSICIKQADEIETILCHKFTRFLMQRAEQFIIMRRVPVEGYHMSFLITHTHLESLYKHKLIDFIIQFMEDIDKEISEMKISLNARGRIVATEFMKQF 168
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BLAST of mRNA_Ecto-sp13_S_contig928.20872.1 vs. uniprot
Match: A0A067C4Y9_SAPPC (Actin-related protein 2/3 complex subunit 4 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C4Y9_SAPPC)

HSP 1 Score: 271 bits (693), Expect = 5.200e-91
Identity = 127/167 (76.05%), Postives = 146/167 (87.43%), Query Frame = 1 
Query:    4 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHKHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 504
            ANTL PYLNAIR TLD ALCL+NFPSQ VERHNKPEVE R SKEL+L P+ ICRNE EKC IE S+NS RVSI +KQADEIE+ILCHKF+ FLMQRAEQF+++RRKP EG+D+SFL+TH HLE L+KHKL+DFIIQFMEDIDKEIS MKI +NARGR++A +FM QF
Sbjct:    2 ANTLAPYLNAIRATLDGALCLQNFPSQVVERHNKPEVEVRMSKELILTPIVICRNENEKCCIEPSINSARVSICIKQADEIESILCHKFSRFLMQRAEQFIILRRKPIEGYDMSFLITHSHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 168
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BLAST of mRNA_Ecto-sp13_S_contig928.20872.1 vs. uniprot
Match: K3WN29_GLOUD (Actin-related protein 2/3 complex subunit 4 n=27 Tax=Oomycota TaxID=4762 RepID=K3WN29_GLOUD)

HSP 1 Score: 268 bits (684), Expect = 1.180e-89
Identity = 130/167 (77.84%), Postives = 145/167 (86.83%), Query Frame = 1 
Query:    4 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHKHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 504
            ANTL PYL AIR +LD+ALCLRNFPSQ VERHNKPEVE R SKELLLNP+ ICRNE EKCLIE SVNS RVSI +KQADEIETILCHKF  FLMQRA+QF++MRR P EG+D+SFLV H HLE ++KHKLIDFII FMEDIDKEIS MKI++NARGRI+A +FM QF
Sbjct:    1 ANTLAPYLTAIRHSLDSALCLRNFPSQVVERHNKPEVELRLSKELLLNPILICRNETEKCLIEPSVNSTRVSICIKQADEIETILCHKFNRFLMQRADQFIIMRRVPVEGYDMSFLVIHTHLENMYKHKLIDFIITFMEDIDKEISEMKISLNARGRIVATEFMKQF 167
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BLAST of mRNA_Ecto-sp13_S_contig928.20872.1 vs. uniprot
Match: W4GJL2_9STRA (Actin-related protein 2/3 complex subunit 4 n=5 Tax=Aphanomyces TaxID=100860 RepID=W4GJL2_9STRA)

HSP 1 Score: 268 bits (684), Expect = 1.270e-89
Identity = 128/167 (76.65%), Postives = 145/167 (86.83%), Query Frame = 1 
Query:    4 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHKHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 504
            ANTL PYLNAIR TLDAALCL+NFPSQ VERHNKPE+E   S+ELLLNPV ICRNE EKC IE S+NS RVSI++KQADEIETILCHKF+ FLMQRAEQF++MRRK  EG+ ISFL+ H HLE L+KHKL+DFIIQFMEDIDKEIS MKI +NARGR++A +FM QF
Sbjct:    2 ANTLAPYLNAIRSTLDAALCLQNFPSQVVERHNKPEIEVGLSRELLLNPVVICRNENEKCCIEPSINSTRVSISIKQADEIETILCHKFSRFLMQRAEQFIIMRRKAIEGYSISFLIIHTHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 168
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BLAST of mRNA_Ecto-sp13_S_contig928.20872.1 vs. uniprot
Match: A0A024TP77_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TP77_9STRA)

HSP 1 Score: 268 bits (686), Expect = 3.310e-89
Identity = 128/167 (76.65%), Postives = 144/167 (86.23%), Query Frame = 1 
Query:    4 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHKHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 504
            ANTL PYLNAIR TLD ALCL+NFPSQ VERHNKPEVE   S+ELLLNPV ICRNE E+C IE S+NS RVSI +KQADEIETILCHKF+ FLMQRAEQF++MRRKP EG+ ISFL+ H HLE L+KHKL+DFIIQFMEDIDKEIS MKI +NARGR++A +FM QF
Sbjct:   51 ANTLAPYLNAIRSTLDGALCLQNFPSQVVERHNKPEVEVGLSRELLLNPVVICRNENERCCIEPSINSTRVSICIKQADEIETILCHKFSRFLMQRAEQFIIMRRKPIEGYSISFLIVHTHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 217
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BLAST of mRNA_Ecto-sp13_S_contig928.20872.1 vs. uniprot
Match: A0A7S2BQQ1_9STRA (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQQ1_9STRA)

HSP 1 Score: 266 bits (679), Expect = 9.930e-89
Identity = 123/167 (73.65%), Postives = 147/167 (88.02%), Query Frame = 1 
Query:    4 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHKHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 504
            A TLRPYLN IR TLDAALCLRNFPSQ VERHNKPE+E + +KELLLNP+TICR + E+CLIE SVNSVR+SI +KQADEIE +LCHKFT FLMQRA+QF++MRRK  EG+ ISFLVTH HLEK+WK+KLIDFII FMEDID+EIS MK+A+NAR R++A++F+ +F
Sbjct:   12 AATLRPYLNCIRSTLDAALCLRNFPSQIVERHNKPEIEIKGNKELLLNPITICRTKTERCLIEPSVNSVRISIQIKQADEIEEVLCHKFTRFLMQRADQFIIMRRKAKEGYSISFLVTHAHLEKMWKNKLIDFIISFMEDIDREISAMKLAVNARARVVAKEFLKEF 178
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BLAST of mRNA_Ecto-sp13_S_contig928.20872.1 vs. uniprot
Match: A0A3R6WI01_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6WI01_9STRA)

HSP 1 Score: 268 bits (686), Expect = 1.930e-88
Identity = 128/167 (76.65%), Postives = 144/167 (86.23%), Query Frame = 1 
Query:    4 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHKHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 504
            ANTL PYLNAIR TLD ALCL+NFPSQ VERHNKPEVE   S+ELLLNPV ICRNE E+C IE S+NS RVSI +KQADEIETILCHKF+ FLMQRAEQF++MRRKP EG+ ISFL+ H HLE L+KHKL+DFIIQFMEDIDKEIS MKI +NARGR++A +FM QF
Sbjct:  104 ANTLAPYLNAIRSTLDGALCLQNFPSQVVERHNKPEVEVGLSRELLLNPVVICRNENERCCIEPSINSTRVSICIKQADEIETILCHKFSRFLMQRAEQFIIMRRKPIEGYSISFLIVHTHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 270
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BLAST of mRNA_Ecto-sp13_S_contig928.20872.1 vs. uniprot
Match: A0A7S2CG59_9STRA (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CG59_9STRA)

HSP 1 Score: 264 bits (675), Expect = 2.970e-88
Identity = 123/168 (73.21%), Postives = 148/168 (88.10%), Query Frame = 1 
Query:    4 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHKHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQFV 507
            A+TL+PYL  +R TL+A LCLRNFPSQTVERHNKPEVE R SKELLLNP+TICR ++E+CLIE SVNSVR+SI +KQADE+E +LCHKFT FLMQRA+QF++MRRK  EG+ ISFLVTH HLEK+WK KLIDF+IQFMEDIDKEIS MK+A+N+R R +AQ+F+ +FV
Sbjct:    2 ASTLKPYLACVRTTLNAGLCLRNFPSQTVERHNKPEVEVRGSKELLLNPLTICRTDKERCLIEPSVNSVRISIQIKQADELEEVLCHKFTRFLMQRADQFIIMRRKAKEGYSISFLVTHAHLEKMWKDKLIDFVIQFMEDIDKEISAMKLAVNSRARNVAQEFVREFV 169
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig928.20872.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKQ4_ECTSI1.090e-11599.41Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
A0A836CIE5_9STRA4.140e-9579.64Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
A0A2D4BNX3_PYTIN3.660e-9179.04Actin-related protein 2/3 complex subunit 4 n=2 Ta... [more]
A0A067C4Y9_SAPPC5.200e-9176.05Actin-related protein 2/3 complex subunit 4 n=4 Ta... [more]
K3WN29_GLOUD1.180e-8977.84Actin-related protein 2/3 complex subunit 4 n=27 T... [more]
W4GJL2_9STRA1.270e-8976.65Actin-related protein 2/3 complex subunit 4 n=5 Ta... [more]
A0A024TP77_9STRA3.310e-8976.65Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A7S2BQQ1_9STRA9.930e-8973.65Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
A0A3R6WI01_9STRA1.930e-8876.65Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A7S2CG59_9STRA2.970e-8873.21Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig928contigEcto-sp13_S_contig928:10882..14918 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score335.5
Seed ortholog evalue1.5e-89
Seed eggNOG ortholog2880.D7FKQ4
Preferred nameARPC4
Model size513
KEGG rclassRC00048,RC00116
KEGG koko:K00275,ko:K05755,ko:K16608
KEGG ReactionR00277,R00278,R01710,R01711
KEGG Pathwayko00750,ko01100,ko01120,ko04144,ko04666,ko04810,ko05100,ko05130,ko05131,ko05132,map00750,map01100,map01120,map04144,map04666,map04810,map05100,map05130,map05131,map05132
KEGG ModuleM00124
Hectar predicted targeting categoryother localisation
GOsGO:0000001,GO:0000147,GO:0000902,GO:0001667,GO:0002009,GO:0002252,GO:0002253,GO:0002376,GO:0002429,GO:0002431,GO:0002433,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0003674,GO:0003779,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005885,GO:0005938,GO:0006810,GO:0006887,GO:0006897,GO:0006909,GO:0006928,GO:0006950,GO:0006996,GO:0007005,GO:0007010,GO:0007015,GO:0007154,GO:0007155,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0008064,GO:0008092,GO:0008150,GO:0008154,GO:0008360,GO:0009611,GO:0009653,GO:0009790,GO:0009888,GO:0009987,GO:0010631,GO:0010638,GO:0012506,GO:0015629,GO:0016020,GO:0016043,GO:0016192,GO:0016331,GO:0016477,GO:0019899,GO:0022603,GO:0022604,GO:0022607,GO:0022610,GO:0023052,GO:0030029,GO:0030030,GO:0030031,GO:0030036,GO:0030041,GO:0030139,GO:0030175,GO:0030479,GO:0030659,GO:0030666,GO:0030670,GO:0030832,GO:0030833,GO:0030838,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0031090,GO:0031143,GO:0031252,GO:0031334,GO:0031410,GO:0031982,GO:0032271,GO:0032273,GO:0032501,GO:0032502,GO:0032535,GO:0032940,GO:0032956,GO:0032970,GO:0032989,GO:0032991,GO:0033043,GO:0033627,GO:0034314,GO:0034622,GO:0038093,GO:0038094,GO:0038096,GO:0040011,GO:0042060,GO:0042995,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044396,GO:0044422,GO:0044424,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0045010,GO:0045335,GO:0046903,GO:0048013,GO:0048308,GO:0048311,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048598,GO:0048729,GO:0048856,GO:0048869,GO:0048870,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051258,GO:0051493,GO:0051495,GO:0051640,GO:0051641,GO:0051646,GO:0051674,GO:0051716,GO:0060429,GO:0061024,GO:0061645,GO:0065003,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066,GO:0090130,GO:0090132,GO:0097435,GO:0097708,GO:0098588,GO:0098657,GO:0098805,GO:0098858,GO:0099568,GO:0110053,GO:0120025,GO:1902903,GO:1902905
Exons3
EggNOG free text desc.Functions as actin-binding component of the Arp2 3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament
EggNOG OGsKOG1876@1,KOG1876@2759
Ec32 ortholog descriptionActin-related protein 2/3 complex subunit ARPC4 or p20-Arc (Arp2/3 complex 20 kDa subunit)
Ec32 orthologEc-21_001730.1
EC1.4.3.5
Cds size513
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464198.4121914-CDS-Ecto-sp13_S_contig928:10881..110641681464198.4121914-CDS-Ecto-sp13_S_contig928:10881..11064Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig928 10882..11064 -
1681464198.429454-CDS-Ecto-sp13_S_contig928:11296..115041681464198.429454-CDS-Ecto-sp13_S_contig928:11296..11504Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig928 11297..11504 -
1681464198.4383757-CDS-Ecto-sp13_S_contig928:14796..149181681464198.4383757-CDS-Ecto-sp13_S_contig928:14796..14918Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig928 14797..14918 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig928.20872.1prot_Ecto-sp13_S_contig928.20872.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig928 10882..14918 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig928.20872.1

>prot_Ecto-sp13_S_contig928.20872.1 ID=prot_Ecto-sp13_S_contig928.20872.1|Name=mRNA_Ecto-sp13_S_contig928.20872.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=171bp
QANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNP
VTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQ
FVVMRRKPAEGFDISFLVTHKHLEKLWKHKLIDFIIQFMEDIDKEISGMK
IAINARGRIIAQQFMLQFVQ*
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mRNA from alignment at Ecto-sp13_S_contig928:10882..14918-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig928.20872.1 ID=mRNA_Ecto-sp13_S_contig928.20872.1|Name=mRNA_Ecto-sp13_S_contig928.20872.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4037bp|location=Sequence derived from alignment at Ecto-sp13_S_contig928:10882..14918- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGCCAACACCTTACGACCGTATCTCAATGCGATACGTGGGACCTTGGA
TGCGGCACTGTGTCTCCGCAACTTCCCTTCCCAAACTGTGGAAAGGCACA
ACAAGCCAGAGGTTGAAACAAGGTAGGCTAGCAATCCGTGTGGAGAAACA
CGGTTTTTACGTTTACTGCCAACTGCTGCTCTGTACAGTGTAAAAGTAGT
GTAGAGTCTATACTCTTCACACCAGCAAGTGTTGAGATGTAGCAGACTGC
TCGTGCTACTTTCTCGGCGCGCTATTCGCACCCTTTCTTAACCCCTTTAG
GATGCACATAAAAATATGCTTCCATGCGAAATTTTCTGAAGCATTCCCAG
TTTCAATCAAAACTTTTCGGGCGAACCACGTGCAAAGGCCGTATTTGGGC
TCCCGCCCTTGTAACGCCTCCTCGTCCAGGCTCAACTCCCTGCGTTTCCC
TTCGAAATCAAGTCAGAGGCGACAAACATGCTACTATGATAGGACACAGT
TAATAATACGGACACAAACGACCTCCATATTCCACGACGCCCGCACGGTT
GGCCGCTAAACAAACGCACATCGCTGCCGGGACATACAGAGCAGCTGCAA
ACGAAGTGCTCTGTACGACACTCAGTCACGCCAAGAATTGGGCTGTTTCT
GCGTTTTTAACGCCGATGAGGAGGTCTGCATTCCATGAGCATGATGCATC
AGTCATCAATCACAGGACGAGACGGCCAGACGATAAGTCTGTCTGTTCGT
TCGAACACGAAACGCAACATTCGTCGACAGTGGAACCAAGAATAAAATAA
TCAAACGTCAAACTGTGTCCTGTATTGTACCTGTAATGACACGTGTCCGC
ATGCATGCTAGCAGCAGTAGAGAGAGGTCGACGCACTGGTCGACATGTGT
CCACATTCGGCAGTAGGTCAACGCGCATGAGTCAATAGAGTCCTCTTAAG
GTGGTTGATTGGATGATGCGGACAGTTCCGGCCCTGGTTGTTAAGTGCAA
CGCTAAAGCTGCCTCCGTGTCATATCTACAACCACCATCAAATTGCCCCT
CGATTTATCGAAGGGCCTTCGATAGGGATCAGACAAACATCTAGTGGAAG
CGTGGTAGAGGGGGCACGCACAGGAGGTTTTGAAGATCTTTCTGTGAAGA
GAACGCGCGACGTTCTACAATCCAAGCTCTCGGTTGCGCGGCGCCTCCTT
TCATCGGTGGGAGGGGGGCTTCTTCCCCGCGCCCCTCGTAGCGCAATCCA
GTCAAGCCCAGATGATCGCGGCGTATTTTTGCTGTTGAACCTGCGGTGTC
ATCCCTTGATTCTCCCTTCCACTACAGTACCCTCTTTCTCCCCTCTGCGA
AGCACCCACAATTCACGGACTAAAGTTCTCCCGTTGTACCCCGGCACCCC
CACTGTCGAGAACTTCAAAGGTGGACACGTTTCTTCGCGAGCTGAAGCAG
GTGAAAGAATGGGGCCAGAGTGTCCACCAAAATGTCGACCCAGCACTTAA
GGAGTTAAACCAATTTAGGACCACTCTTTCGCAACGTCAGTAGGTCGCGC
AGGCACATCGTTTCTTTTGCCATGGATGAACGAAAACTAGGCATTTATTG
TCTCGGCTTTGCTTTCGAACCCTTTCACCATCATTTGCCACAGCACTCGT
CGCGCACATGGAGGCTGCTGCAACAACAGCATGTCCACTCATGAGAAACG
CCTGTACACAGCAAGGCTCAAGGCCTGAGTGCCGAAACATTTGAGTTCAG
GCTATCCGAAGCTGCTGCTGTAAACCTGGTACGTTTTTTTGTGTTTCGCA
GATGGCTAAGACGATTTCTTGCGCCACTCTCTTGTTTCCTCAACAATCTG
AGCCTGGATATCTTGTGGAGGTGCTTCTTTTGAGCGGCCCGGTACTGCAA
ATTGTTAGGCTCCTTGTACTCCGCAAACTTCGTTGCTTTGACTTGCGTAC
ATTCCCGCCTGTCTCTTTCGTTAGCAAAGCCCGAGTTTTGTTGCGTCGGA
AGAGCAGCTGTTTCCCCCCTCGGGGTGCTGTTTCAATAGCTTGCTCTTAT
CGTTTACAGGAGCAAGCGTGGTGCTTGTACAGGCCCGAACCGCGACCCTT
CAGCCCTACGTATCAGTACACCCATTACGCATGACACCCCTAGTGCCCTC
ATGAAATTATCCCCCCTGTTTCTCTTTCTCACGCACACATAGATTGTCGG
GAACAAACAAAACAACCCTCCGACCTGTGCATGCCAAGCGAACGTCTACA
TTAGGCACACGATTCTTCATCCTGCATAATAGCTGCAAAATAGTTGCTGG
TGTTGTCGCGCTCAGTAATGTTAGGTAGACCATCTTACTGTAGGTGATGA
GATTCGGAAGTAACACCTGACATGAACACCAAATTCTTGCAGCATGCCCG
AAATGGCCTGTTTCGAATCGCCAACTTTTGGGCAACACTTTCGGATAGCC
CCGTTGTGTCCAATACGTGTGGGAGTTTGAGCAGATATGGGTTTTAGCTG
TTACACAGTGTTATCCAACAACGTTCCGACCCGCCGACTCTCCACATCCC
ACACTGCTCGAGGGTGGCTTGCAAGTATACCGCTAGGCGATTGATCCCCA
CAACCTCTAGCAGCAGCCAGACGGGTTGTGCCATGTGGCTAGCCCAGAGC
GGATAGCTTCGTGATAACCATTTCTTCGCTTAGTCACCCAGACTCGGAGG
AAACCAATCCGACGTGTATGGCAAATGAACGGAAGATATCGTGGTAGCAG
CGGTAGATTTTTTGCCGCATGCTCTCCTCCTATCGCCAGGTAACACCATA
CACAGCTCGCCAGGAATGGCTTGCGCAGCATGACAAGAGGCCTATACATT
GCCCTTTCCCCCCGAGGGCTCCTGGATATTGTTCGACATCTCACGTTGCA
GTGATGATCCGCGATTCGAACCACAGCTGTAAGAATTGATTGCATGCTGC
CAGCAGCAGCCGCCACCGTTCGAGGAGTACCTGTTTTCGCCGCGGCCTGA
ACGATTTTGTCTGAAGCCAACTTGTTTCAGACTGTTTTTGGTGCTCGTGG
TGGTGATCTTCCACTCTAAGCCCTGGTCTATCTGCACCGTGACCGAGTTT
CGGGCGGTTTAGTCAACCCCTGCGGTGACTTGCTCCACCGGTCGTGATTT
AATGGGATTCGACGTATGGGTTACGGCAGCAATGGCCTGTGCTGGTACTA
CAGCGTTGATGAAGCTGGAGAGAATCCAATCGTCGGAGCGGCCGGGCACG
TTTTTGGGGAGAGCCTCCGACGTGACGATTCCCTTTGCAAGCGACAAATG
TCGAAAATTGGTGTACAGCATTTTGTTAAGACCATATACAGCAGCGCCGT
ACAATACCCTTCGCCGTTACGTGCGTGATGCATAACTACAAACTTCTGTC
TTATTCTACCGCAGGTCGAGCAAAGAACTTCTTCTCAACCCGGTGACGAT
TTGCCGGAATGAACAAGAGAAATGCCTCATCGAAACAAGCGTCAACAGCG
TGCGAGTTAGCATTGCTGTTAAGCAAGCTGACGAGATCGAGACGATTCTG
TGCCACAAGTTCACGAGCTTCTTGATGCAGCGTGCGGAGCAATTTGTGGT
GATGCGACGAAAGCCTGCCGAGGTTAGTATTGTAACATCACAACCGCAAC
CGCATTTTCCTCTCGTCCGTCGGATAGATGCGTCGGGAACGAAAAGGTGT
CGCTTGGCCAAAGAGGTGTATGTTCAGTGTATTTCTGATGCACGTTGTGG
AAGCTCTACGCATTTAGTTTTAACACGATGATACGATGGAGGTTCTTAGG
CGATATCAAGCTAAGAAGTGCTCTTGTTCACCCACGTGTCGCGCGATTCG
ACAGGGATTCGACATCAGCTTCCTCGTGACTCACAAGCACCTGGAGAAGC
TGTGGAAGCATAAGCTAATCGATTTCATTATCCAGTTCATGGAAGACATC
GACAAGGAAATTAGTGGCATGAAAATCGCCATCAACGCGAGGGGAAGAAT
AATTGCACAGCAGTTCATGCTTCAGTTTGTGCAGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig928:10882..14918-

>mRNA_Ecto-sp13_S_contig928.20872.1 ID=mRNA_Ecto-sp13_S_contig928.20872.1|Name=mRNA_Ecto-sp13_S_contig928.20872.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=513bp|location=Sequence derived from alignment at Ecto-sp13_S_contig928:10882..14918- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGCCAACACCTTACGACCGTATCTCAATGCGATACGTGGGACCTTGGA
TGCGGCACTGTGTCTCCGCAACTTCCCTTCCCAAACTGTGGAAAGGCACA
ACAAGCCAGAGGTTGAAACAAGGTCGAGCAAAGAACTTCTTCTCAACCCG
GTGACGATTTGCCGGAATGAACAAGAGAAATGCCTCATCGAAACAAGCGT
CAACAGCGTGCGAGTTAGCATTGCTGTTAAGCAAGCTGACGAGATCGAGA
CGATTCTGTGCCACAAGTTCACGAGCTTCTTGATGCAGCGTGCGGAGCAA
TTTGTGGTGATGCGACGAAAGCCTGCCGAGGGATTCGACATCAGCTTCCT
CGTGACTCACAAGCACCTGGAGAAGCTGTGGAAGCATAAGCTAATCGATT
TCATTATCCAGTTCATGGAAGACATCGACAAGGAAATTAGTGGCATGAAA
ATCGCCATCAACGCGAGGGGAAGAATAATTGCACAGCAGTTCATGCTTCA
GTTTGTGCAGTGA
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