prot_Ecto-sp13_S_contig9271.20863.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9271.20863.1
Unique Nameprot_Ecto-sp13_S_contig9271.20863.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length133
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9271.20863.1 vs. uniprot
Match: D7FRW2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRW2_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 6.640e-65
Identity = 106/133 (79.70%), Postives = 115/133 (86.47%), Query Frame = 0 
Query:    1 MVLTWCLRI-RLQNTVQMRSDGATSGNVRWLNQPFTPGSEAQLADDASCGHLRTAGVSQYPEARRQRDGGLAVHPREVEPVRRLALESEISAAGSTVGIDADIGHIRHFFWLLDILWRRT-TISSLASLPSFP 131
            MV+ W  RI RLQN V++R+DGATSGNVRWL++P  PGSE QLADD SCG LRTA VSQ PEARR+RDGGLAVHPREVEPVRRLALESEI AAGS VGIDADIGH+R F  LLDILWRRT T+SSLASLPSFP
Sbjct:    1 MVVNWLPRIVRLQNPVRIRADGATSGNVRWLSRPLRPGSEPQLADDPSCGDLRTASVSQNPEARRRRDGGLAVHPREVEPVRRLALESEIFAAGSIVGIDADIGHLRLFLRLLDILWRRTFTLSSLASLPSFP 133
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9271.20863.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRW2_ECTSI6.640e-6579.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9271contigEcto-sp13_S_contig9271:3831..6154 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9271.20863.1mRNA_Ecto-sp13_S_contig9271.20863.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9271 3831..6154 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9271.20863.1 ID=prot_Ecto-sp13_S_contig9271.20863.1|Name=mRNA_Ecto-sp13_S_contig9271.20863.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=133bp
MVLTWCLRIRLQNTVQMRSDGATSGNVRWLNQPFTPGSEAQLADDASCGH
LRTAGVSQYPEARRQRDGGLAVHPREVEPVRRLALESEISAAGSTVGIDA
DIGHIRHFFWLLDILWRRTTISSLASLPSFPT*
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