prot_Ecto-sp13_S_contig9270.20861.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9270.20861.1
Unique Nameprot_Ecto-sp13_S_contig9270.20861.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length436
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9270.20861.1 vs. uniprot
Match: A0A6H5L6K6_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6K6_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 1.870e-76
Identity = 238/365 (65.21%), Postives = 244/365 (66.85%), Query Frame = 0 
Query:   71 GSGGGGSVVSGFGXXXXXXXXXXXXXXXXVKADGVXXXXXTSGGGVGGRDGGVEKDCNDGAPVSPAAATEAKAKREDYSGSXXXXXXXXXXXXXXXXXDGDHERSDVLGDLRGEEDNSAXXXXXXXXXXXDNDYEDKDEXKXDNDESSDVLGDLRRREDAKDAKQKNNXXXXXXXXS--TPPSPLSVLEKDKSEVFVPAPQAPSLSTQYSPFSVDDXXXXXXXXXGYERKKADRAPETAGAGGANNSGDEGGFSSVNPMFRGVAGPREGDGNISSSSGSLSXXXXXXXXXVAGVDLLPGTGAGXXXXXXXXXXSASRFFDHDVGRTVMMGDGSPLTSEEVASALAAATAAVLPKGGKQEEVTATV 433
            GSGGGGSVVSGFG    XXXXXXXXXXXX      XXXXX     V G+DG V+K C+DGA VSPAAATE KAKREDYSGS XXXXXXXXXXXX    DGDHE SDVLGD R       XXXXX      D D EDKD X X                 AKDAKQKNN        S  T PSPLSVLEKDK EVFVPA QAPSLSTQYSPFSVD           YE+K+AD APETAGAGGANNSGDEGGF SVNPM RG AGPRE             XXXXXXXXXVAGVDLLP               SASRFFD +VGRTVM GDGSPLTSEEVASALAAATAAVLPKG KQ EVTATV
Sbjct: 1399 GSGGGGSVVSGFGVASAXXXXXXXXXXXXXXXXXXXXXXXXXXXSVFGQDGEVDKYCSDGASVSPAAATEEKAKREDYSGSGXXXXXXXXXXXXGEDDDGDHESSDVLGDRRXXX-XXXXXXXXEQKKDGDKDGEDKDXXXXXXXXXXXXXXXXXXXXXAKDAKQKNNKRGGRSSSSLTTTPSPLSVLEKDKGEVFVPASQAPSLSTQYSPFSVDGDDDDEDGDDVYEQKEADCAPETAGAGGANNSGDEGGFRSVNPMLRGGAGPREXXXXXXXXXXXXXXXXXXXXXXVAGVDLLPAA------------CSASRFFDQNVGRTVMRGDGSPLTSEEVASALAAATAAVLPKGRKQREVTATV 1750
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9270.20861.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L6K6_9PHAE1.870e-7665.21Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9270contigEcto-sp13_S_contig9270:2938..4245 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9270.20861.1mRNA_Ecto-sp13_S_contig9270.20861.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9270 2938..4246 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9270.20861.1 ID=prot_Ecto-sp13_S_contig9270.20861.1|Name=mRNA_Ecto-sp13_S_contig9270.20861.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=436bp
FFAIGFGSGGGKTDGAGGGNSFFGKGFVSSGAKADGAGGGGGFFGNGFSN
SGVKADFGTSGSSGFFANGLGSGGGGSVVSGFGGASADNGFFANGFGNGV
KADGVSGVSGTSGGGVGGRDGGVEKDCNDGAPVSPAAATEAKAKREDYSG
SGATEEKGKEKDDNGGGGDGDHERSDVLGDLRGEEDNSAAAAAAEQKKDE
DNDYEDKDEDKDDNDESSDVLGDLRRREDAKDAKQKNNKRGGRSSSSTPP
SPLSVLEKDKSEVFVPAPQAPSLSTQYSPFSVDDDEEEENGDDGYERKKA
DRAPETAGAGGANNSGDEGGFSSVNPMFRGVAGPREGDGNISSSSGSLSS
SGSLSSSGVAGVDLLPGTGAGGGAAAAAAAGSASRFFDHDVGRTVMMGDG
SPLTSEEVASALAAATAAVLPKGGKQEEVTATVAEA
back to top