prot_Ecto-sp13_S_contig9268.20858.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9268.20858.1
Unique Nameprot_Ecto-sp13_S_contig9268.20858.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length144
Homology
BLAST of mRNA_Ecto-sp13_S_contig9268.20858.1 vs. uniprot
Match: D8LT67_ECTSI (Poly(A) ribonuclease subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT67_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 6.650e-89
Identity = 136/141 (96.45%), Postives = 139/141 (98.58%), Query Frame = 0
Query:    2 QVCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRSLLVVSFADVKRCLEEAFAEISGHAG 142
            +VCVATAHHTMDAMENTLMANGALQ HLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRD+RSLLVVSFADVKRCLEEAFAE+SGH G
Sbjct:  419 EVCVATAHHTMDAMENTLMANGALQGHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDRRSLLVVSFADVKRCLEEAFAEVSGHGG 559          
BLAST of mRNA_Ecto-sp13_S_contig9268.20858.1 vs. uniprot
Match: A0A6H5KPZ2_9PHAE (Pan3_PK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPZ2_9PHAE)

HSP 1 Score: 272 bits (695), Expect = 2.190e-85
Identity = 133/135 (98.52%), Postives = 135/135 (100.00%), Query Frame = 0
Query:    2 QVCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRSLLVVSFADVKRCLEEAFAE 136
            +VCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRLLLKLGT+NERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRSLLVVSFADVKRCLEEAFAE
Sbjct:  438 EVCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRLLLKLGTVNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRSLLVVSFADVKRCLEEAFAE 572          
BLAST of mRNA_Ecto-sp13_S_contig9268.20858.1 vs. uniprot
Match: A0A835ZFN0_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFN0_9STRA)

HSP 1 Score: 163 bits (413), Expect = 3.580e-44
Identity = 86/148 (58.11%), Postives = 105/148 (70.95%), Query Frame = 0
Query:    2 QVCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRLLLKLGTLNERPD-QGGV--GEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRSLLVVSFADVKRCLEEAFAEI--SGHAGPP 144
            Q  V  A H  D ++ +      L SHL  EYDNGRLLRLLLKLG +NERPD Q GV  G WSETG+RY+LKLFRDY FHQVD  G   +D GH+ Q L+ LD G+ E+ILLTSRD+R++LV S+ D+KRCLEEAF E+  +G+A  P
Sbjct:  595 QALVMAAPHMADCLDASHHECDVLHSHLHGEYDNGRLLRLLLKLGAVNERPDTQRGVSGGGWSETGDRYVLKLFRDYCFHQVDETGAAHLDLGHMLQCLNKLDVGDPERILLTSRDQRNILVASYEDIKRCLEEAFNELCATGNAQMP 742          
BLAST of mRNA_Ecto-sp13_S_contig9268.20858.1 vs. uniprot
Match: A0A7S3GPC3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GPC3_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.680e-43
Identity = 73/128 (57.03%), Postives = 101/128 (78.91%), Query Frame = 0
Query:   13 DAMENTLMANGALQSHLASEYDNGRLLRLLLKLGTLNERPDQGGVGE--WSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRSLLVVSFADVKRCLEEAFAEIS 138
            + ++  + A  AL SHL SEY+NGR+LRL++KLG +NERP      +  WSETG++Y+LKLFRD++FHQVD+DG P++D GHV  +L+ LDAG+ E+ILL+SRD + LLVVS+ADV+RCLE +F E+S
Sbjct:   29 EELDTAMAAADALHSHLRSEYENGRMLRLMMKLGFVNERPADHNPMQPHWSETGDQYVLKLFRDHVFHQVDSDGLPILDAGHVLTALNKLDAGDPEEILLSSRDGKDLLVVSYADVQRCLESSFLELS 156          
BLAST of mRNA_Ecto-sp13_S_contig9268.20858.1 vs. uniprot
Match: A0A7S2D0I1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D0I1_9STRA)

HSP 1 Score: 152 bits (385), Expect = 2.100e-43
Identity = 67/135 (49.63%), Postives = 98/135 (72.59%), Query Frame = 0
Query:    3 VCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRSLLVVSFADVKRCLEEAFAEI 137
            VC A A H  + +        AL+ HL +E +NGRLL+LL+KLGT+NERP+      W++TG+RY+LKLFRDYLFHQ D +G+PV+D GH+  +L+ +DAG+ E+++LTS D++S+ V SF D++RC + AF E+
Sbjct:   71 VCTAIAPHAFEELNMMYGVADALEVHLGNEVENGRLLKLLIKLGTINERPEHQMNPNWADTGDRYVLKLFRDYLFHQTDDNGDPVVDIGHIVNALNKVDAGDTEQVILTSPDQQSVFVASFEDIRRCADSAFHEL 205          
BLAST of mRNA_Ecto-sp13_S_contig9268.20858.1 vs. uniprot
Match: A0A7S2K6Q0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K6Q0_9STRA)

HSP 1 Score: 155 bits (393), Expect = 2.510e-43
Identity = 71/136 (52.21%), Postives = 101/136 (74.26%), Query Frame = 0
Query:    2 QVCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRSLLVVSFADVKRCLEEAFAEI 137
            +VC   A+HTMD ++N      A  + LA+EY++GR LRLLLKLG +NERP+ G   +W+ETG+ Y+LKLFRD++FHQ D  G P++D GHV  +L+ LDA + EKI+L SRD +++LVVS+A+V  CLE A++E+
Sbjct:  228 EVCGIMANHTMDELDNAYATCDAYSNQLAAEYESGRALRLLLKLGFVNERPEFGVNRQWAETGDCYVLKLFRDFVFHQADETGRPILDLGHVVTALNKLDASDTEKIVLASRDGKAILVVSYAEVANCLENAYSEL 363          
BLAST of mRNA_Ecto-sp13_S_contig9268.20858.1 vs. uniprot
Match: A0A7S2BWX0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BWX0_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.200e-42
Identity = 66/136 (48.53%), Postives = 100/136 (73.53%), Query Frame = 0
Query:    2 QVCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRSLLVVSFADVKRCLEEAFAEI 137
            Q+C   A    D ++       AL+SHL +E +NGRLL+L++KLG +NERP+      W+ETG+RY+LKLFRDYLFHQVD +GE V+D GH+   L+ +D+ ++EK++L++ D+ S+LV SF+DV+RC++E+F E+
Sbjct:   30 QLCATIAPKAFDELDMMYGVADALESHLTNEAENGRLLKLMIKLGCINERPEYQMNPHWAETGDRYVLKLFRDYLFHQVDENGEAVVDAGHIVNGLNKVDSNHDEKVVLSAPDQSSVLVASFSDVRRCVDESFHEL 165          
BLAST of mRNA_Ecto-sp13_S_contig9268.20858.1 vs. uniprot
Match: A0A8H8UCF3_9HELO (PAN2-PAN3 deadenylation complex subunit PAN3 n=1 Tax=Lachnellula subtilissima TaxID=602034 RepID=A0A8H8UCF3_9HELO)

HSP 1 Score: 159 bits (401), Expect = 1.840e-42
Identity = 71/136 (52.21%), Postives = 106/136 (77.94%), Query Frame = 0
Query:    2 QVCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRSLLVVSFADVKRCLEEAFAEI 137
            ++ +  ++H +DA +++L AN  L S LA E +NGR++RLL+KLG++NERPD  G   WSE GERY+LKLFRDY+FHQV+A+G PV+D GH+   L+ LDAG++EKI LTSRD++++ VVS+ +VK+ +  A+A++
Sbjct:  647 ELLIGISNHIVDAFDSSLHANDTLYSELAREVENGRIVRLLMKLGSINERPDYDGELNWSENGERYVLKLFRDYVFHQVNAEGRPVVDMGHILACLNKLDAGSQEKITLTSRDEQTVFVVSYNEVKKQVNSAWADL 782          
BLAST of mRNA_Ecto-sp13_S_contig9268.20858.1 vs. uniprot
Match: A0A8H8S376_9HELO (PAN2-PAN3 deadenylation complex subunit PAN3 n=1 Tax=Lachnellula occidentalis TaxID=215460 RepID=A0A8H8S376_9HELO)

HSP 1 Score: 159 bits (401), Expect = 1.880e-42
Identity = 71/136 (52.21%), Postives = 106/136 (77.94%), Query Frame = 0
Query:    2 QVCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRSLLVVSFADVKRCLEEAFAEI 137
            ++ +  ++H +DA +++L AN  L S LA E +NGR++RLL+KLG++NERPD  G   WSE GERY+LKLFRDY+FHQV+A+G PV+D GH+   L+ LDAG++EKI LTSRD++++ VVS+ +VK+ +  A+A++
Sbjct:  652 ELLIGISNHIVDAFDSSLHANDTLYSELAREVENGRIVRLLMKLGSINERPDYDGELNWSENGERYVLKLFRDYVFHQVNAEGRPVVDMGHILACLNKLDAGSQEKITLTSRDEQTVFVVSYNEVKKQVNSAWADL 787          
BLAST of mRNA_Ecto-sp13_S_contig9268.20858.1 vs. uniprot
Match: A0A7D8YSJ5_9HELO (PAN2-PAN3 deadenylation complex subunit PAN3 n=1 Tax=Lachnellula cervina TaxID=1316786 RepID=A0A7D8YSJ5_9HELO)

HSP 1 Score: 158 bits (400), Expect = 2.150e-42
Identity = 70/136 (51.47%), Postives = 106/136 (77.94%), Query Frame = 0
Query:    2 QVCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRSLLVVSFADVKRCLEEAFAEI 137
            ++ +  ++H +DA +++L AN  L S LA E +NGR++RLL+KLG++NERPD  G   WSE GERY+LKLFRDY+FHQV+A+G PV+D GH+   L+ LDAG++EKI LTSRD++++ +VS+ +VK+ +  A+A++
Sbjct:  609 ELLIGISNHIVDAFDSSLHANDTLYSELAREVENGRIVRLLMKLGSINERPDYDGELNWSENGERYVLKLFRDYVFHQVNAEGRPVVDMGHILACLNKLDAGSQEKITLTSRDEQTVFIVSYNEVKKQVNSAWADL 744          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9268.20858.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LT67_ECTSI6.650e-8996.45Poly(A) ribonuclease subunit n=1 Tax=Ectocarpus si... [more]
A0A6H5KPZ2_9PHAE2.190e-8598.52Pan3_PK domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835ZFN0_9STRA3.580e-4458.11Protein kinase domain-containing protein n=1 Tax=T... [more]
A0A7S3GPC3_9STRA1.680e-4357.03Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2D0I1_9STRA2.100e-4349.63Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2K6Q0_9STRA2.510e-4352.21Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2BWX0_9STRA1.200e-4248.53Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A8H8UCF3_9HELO1.840e-4252.21PAN2-PAN3 deadenylation complex subunit PAN3 n=1 T... [more]
A0A8H8S376_9HELO1.880e-4252.21PAN2-PAN3 deadenylation complex subunit PAN3 n=1 T... [more]
A0A7D8YSJ5_9HELO2.150e-4251.47PAN2-PAN3 deadenylation complex subunit PAN3 n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041332Pan3 pseudokinase domainPFAMPF18101Pan3_PKcoord: 3..137
e-value: 5.1E-52
score: 175.5
IPR030844PAN2-PAN3 deadenylation complex subunit PAN3PANTHERPTHR12272FAMILY NOT NAMEDcoord: 2..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9268contigEcto-sp13_S_contig9268:4769..6314 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9268.20858.1mRNA_Ecto-sp13_S_contig9268.20858.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9268 4769..6314 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9268.20858.1 ID=prot_Ecto-sp13_S_contig9268.20858.1|Name=mRNA_Ecto-sp13_S_contig9268.20858.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=144bp
GQVCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRLLLKLGTLNE
RPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLL
DAGNEEKILLTSRDKRSLLVVSFADVKRCLEEAFAEISGHAGPP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041332Pan3_PK
IPR030844PAN3