prot_Ecto-sp13_S_contig926.20844.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig926.20844.1
Unique Nameprot_Ecto-sp13_S_contig926.20844.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length505
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig926.20844.1 vs. uniprot
Match: A0A6H5LM15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LM15_9PHAE)

HSP 1 Score: 601 bits (1550), Expect = 2.160e-210
Identity = 372/505 (73.66%), Postives = 385/505 (76.24%), Query Frame = 0 
Query:    3 QPRETMERKGGGYSWAEDDDHARVLLALHLELLAYGLNVHHGGNSPAIRIEQSSAGAFPPMRYIDGGGG-RVITIHALAMFDDLIVSGTAVAAAGGDGGRDS-SGDAVHRRTTFSVSEWSPQLLLSSTSRHQQQQSGGVAKGQPRQQEQLKXXXXXXXXXXXXXXXXXEQCPAATKHPHLPERQAPPPGDGDNDGRDTGKGTLESTSXXXXXXXXXXXXXXXQGRPSLARGGGEAFRSRVVSGLLLHLCPPPGHFADLLGCGDELLRHVLGMLGARDLATVGLTGRAAAVSVAADCLWAKLVAADFSEREQHAVLFLQPPPPRSPSPSLDAAENATAAAAASEGGCRCGGDXXXXXXSPXXXGGLXXXXXXXAPCACSRANGCSXXXXXXGKKCRGGSEGASRRLYAKLSAARARQAAQAAERLRRSSVLEMAALGRLGRSWGLYPWAPYLPRGPFHTHGAPPSPEYGFVDPLGGDGMGPGAAPPXXXXXXXXXXWRSGWRSTFG 505
            +PR T ERKGGGYSWAEDDDHARVLLALHLELLAYGLNVHH G+SPA+R+EQS+AGAFPPMRY+DGGGG RVITIHALAMFDDLIVSGTAVA  G DGGRDS  GDAVHRRTTFSVSEWSPQLLLSSTSR QQQQSGGV KGQP+QQ QLK                 +QCP ATKHPHLPERQA PPGDGDNDGR+TGKGTLES+ XXXXXXXXXXXXXXX    SL  GG EAFRSRVVSGLLLHLCPPPGHFADLLGCGDELLRHVLGMLGARDLA VGLTGRAAAVSVAADCLWAKLVAADFSEREQHAVLFLQP                                    XX  XXX   XXXXXXX            XXXXXX       +EGASRRLYAKLSAARARQAA    RLRRSSVLEMAALGRLGR+WGLYPWAPYLPRGPFHTHGAPPSPEYG +D LGGDG GPG A P          WRSGW STFG
Sbjct:    2 EPRGTTERKGGGYSWAEDDDHARVLLALHLELLAYGLNVHHRGDSPAVRMEQSNAGAFPPMRYVDGGGGGRVITIHALAMFDDLIVSGTAVATGGRDGGRDSRGGDAVHRRTTFSVSEWSPQLLLSSTSRDQQQQSGGVPKGQPQQQVQLKEGQQNAEGSSSGGTQSGDQCPTATKHPHLPERQASPPGDGDNDGRETGKGTLESSXXXXXXXXXXXXXXXXXXXXSLVGGGQEAFRSRVVSGLLLHLCPPPGHFADLLGCGDELLRHVLGMLGARDLAMVGLTGRAAAVSVAADCLWAKLVAADFSEREQHAVLFLQP------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEGASRRLYAKLSAARARQAAXXXXRLRRSSVLEMAALGRLGRAWGLYPWAPYLPRGPFHTHGAPPSPEYGLLDSLGGDGTGPGLALPLPPSPPSSSRWRSGWHSTFG 470
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig926.20844.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LM15_9PHAE2.160e-21073.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig926contigEcto-sp13_S_contig926:4113..7967 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig926.20844.1mRNA_Ecto-sp13_S_contig926.20844.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig926 4054..7967 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig926.20844.1 ID=prot_Ecto-sp13_S_contig926.20844.1|Name=mRNA_Ecto-sp13_S_contig926.20844.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=505bp
MDQPRETMERKGGGYSWAEDDDHARVLLALHLELLAYGLNVHHGGNSPAI
RIEQSSAGAFPPMRYIDGGGGRVITIHALAMFDDLIVSGTAVAAAGGDGG
RDSSGDAVHRRTTFSVSEWSPQLLLSSTSRHQQQQSGGVAKGQPRQQEQL
KEGQQNAEESPSGGAQSDEQCPAATKHPHLPERQAPPPGDGDNDGRDTGK
GTLESTSQQQQQQQQQQQQRRRQGRPSLARGGGEAFRSRVVSGLLLHLCP
PPGHFADLLGCGDELLRHVLGMLGARDLATVGLTGRAAAVSVAADCLWAK
LVAADFSEREQHAVLFLQPPPPRSPSPSLDAAENATAAAAASEGGCRCGG
DAGCGCESPAAAGGLAAEAGGGAPCACSRANGCSGGGGCGGKKCRGGSEG
ASRRLYAKLSAARARQAAQAAERLRRSSVLEMAALGRLGRSWGLYPWAPY
LPRGPFHTHGAPPSPEYGFVDPLGGDGMGPGAAPPLPPSPPSSSSWRSGW
RSTFG
back to top