mRNA_Ecto-sp13_S_contig125.2080.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig125.2080.1 vs. uniprot
Match: D7FRN0_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRN0_ECTSI) HSP 1 Score: 122 bits (305), Expect = 1.780e-33 Identity = 57/88 (64.77%), Postives = 73/88 (82.95%), Query Frame = 1
Query: 1 QPPRCKFMRPLLHPNLFPSGTVGLRMLDENEEWTPSTTIKQILQGIYELLAHPNIDDPAQSEAYHLFKNDREEYDRRVRMEAKKHPPA 264
+PP+CKF+ PL HPN++PSGT+ L +L+E + W PS TIKQ+L GI+ELL +PN DDPAQSEAY LF N++ EYDRRV +EAKK+PPA
Sbjct: 73 KPPKCKFVPPLFHPNVYPSGTICLSILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPPA 160
BLAST of mRNA_Ecto-sp13_S_contig125.2080.1 vs. uniprot
Match: A0A0B7F610_THACB (Ubiquitin-conjugating enzyme E2 I n=15 Tax=Ceratobasidiaceae TaxID=5250 RepID=A0A0B7F610_THACB) HSP 1 Score: 115 bits (287), Expect = 8.760e-31 Identity = 54/87 (62.07%), Postives = 68/87 (78.16%), Query Frame = 1
Query: 1 QPPRCKFMRPLLHPNLFPSGTVGLRMLDENEEWTPSTTIKQILQGIYELLAHPNIDDPAQSEAYHLFKNDREEYDRRVRMEAKKHPP 261
+PP+CKF PL HPN++PSGTV L +LDE + W P+ TIKQIL GI +LL PNI DPAQSEAY +FKNDR YDRR+R +A+++ P
Sbjct: 71 KPPKCKFTPPLFHPNVYPSGTVCLSILDEEKSWKPAITIKQILLGIQDLLNDPNISDPAQSEAYTMFKNDRTAYDRRIRQQARENVP 157
BLAST of mRNA_Ecto-sp13_S_contig125.2080.1 vs. uniprot
Match: H2WH81_CAEJA (SUMO-conjugating enzyme n=1 Tax=Caenorhabditis japonica TaxID=281687 RepID=H2WH81_CAEJA) HSP 1 Score: 112 bits (279), Expect = 3.130e-30 Identity = 51/84 (60.71%), Postives = 69/84 (82.14%), Query Frame = 1
Query: 4 PPRCKFMRPLLHPNLFPSGTVGLRMLDENEEWTPSTTIKQILQGIYELLAHPNIDDPAQSEAYHLFKNDREEYDRRVRMEAKKH 255
PP+CKF PL HPN++PSGTV L +LDEN++W PS +IKQ+L GI +LL HPNIDDPAQ+EAY ++ +R EY++RV+ EA+K+
Sbjct: 11 PPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIDDPAQAEAYQIYCQNRVEYEKRVKKEAQKY 94
BLAST of mRNA_Ecto-sp13_S_contig125.2080.1 vs. uniprot
Match: A0A0C2WRH2_9AGAM (UBC core domain-containing protein n=2 Tax=Serendipita TaxID=358905 RepID=A0A0C2WRH2_9AGAM) HSP 1 Score: 113 bits (283), Expect = 3.540e-30 Identity = 53/87 (60.92%), Postives = 68/87 (78.16%), Query Frame = 1
Query: 1 QPPRCKFMRPLLHPNLFPSGTVGLRMLDENEEWTPSTTIKQILQGIYELLAHPNIDDPAQSEAYHLFKNDREEYDRRVRMEAKKHPP 261
+PP+CKF PL HPN++PSGTV L +LDE + W P TIKQIL GI +LL PNI+DPAQS+AY +FKND+ YDRR+R +AK++ P
Sbjct: 71 KPPKCKFTPPLFHPNVYPSGTVCLSILDEEKAWKPGITIKQILLGIQDLLNDPNINDPAQSDAYTMFKNDKNAYDRRIRQQAKENIP 157
BLAST of mRNA_Ecto-sp13_S_contig125.2080.1 vs. uniprot
Match: A0A6P6YK31_DERPT (SUMO-conjugating enzyme UBC9-B-like n=3 Tax=Pyroglyphidae TaxID=6952 RepID=A0A6P6YK31_DERPT) HSP 1 Score: 113 bits (282), Expect = 5.160e-30 Identity = 54/86 (62.79%), Postives = 67/86 (77.91%), Query Frame = 1
Query: 4 PPRCKFMRPLLHPNLFPSGTVGLRMLDENEEWTPSTTIKQILQGIYELLAHPNIDDPAQSEAYHLFKNDREEYDRRVRMEAKKHPP 261
PP+CKF PL HPN++PSGTV L +LDE ++W PSTTIKQIL GI ELL PN+ DPAQ+EAY + ND+ EY+RRVR +AK + P
Sbjct: 72 PPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPSTTIKQILIGIQELLNEPNVKDPAQAEAYTFYCNDKTEYERRVRNQAKMNTP 157
BLAST of mRNA_Ecto-sp13_S_contig125.2080.1 vs. uniprot
Match: A0A1X6N9W2_9APHY (UBC core domain-containing protein n=32 Tax=Agaricomycetes TaxID=155619 RepID=A0A1X6N9W2_9APHY) HSP 1 Score: 112 bits (281), Expect = 7.110e-30 Identity = 52/87 (59.77%), Postives = 69/87 (79.31%), Query Frame = 1
Query: 1 QPPRCKFMRPLLHPNLFPSGTVGLRMLDENEEWTPSTTIKQILQGIYELLAHPNIDDPAQSEAYHLFKNDREEYDRRVRMEAKKHPP 261
+PP+CKF PL HPN++PSGTV L +LDE + W P+ TIKQ+L GI ELL PN++DPAQS+AY +FKNDR Y+RRVR +A+++ P
Sbjct: 71 KPPKCKFAPPLFHPNVYPSGTVCLSILDEEKSWKPAITIKQVLLGIQELLNDPNVNDPAQSDAYTMFKNDRVAYERRVRQQARENIP 157
BLAST of mRNA_Ecto-sp13_S_contig125.2080.1 vs. uniprot
Match: A0A2T9ZIT5_9FUNG (UBC core domain-containing protein n=1 Tax=Smittium megazygosporum TaxID=133381 RepID=A0A2T9ZIT5_9FUNG) HSP 1 Score: 112 bits (281), Expect = 7.310e-30 Identity = 51/87 (58.62%), Postives = 69/87 (79.31%), Query Frame = 1
Query: 1 QPPRCKFMRPLLHPNLFPSGTVGLRMLDENEEWTPSTTIKQILQGIYELLAHPNIDDPAQSEAYHLFKNDREEYDRRVRMEAKKHPP 261
+PP+CKF PL HPN+FPSGTV L +L+E + W PS T+KQIL G+ +LL PN +DPAQS+AYH+FKND+ Y++RVR +A++H P
Sbjct: 71 KPPKCKFTPPLFHPNVFPSGTVCLSILNEEKGWKPSITVKQILLGVQDLLNDPNNNDPAQSDAYHMFKNDKVAYEKRVRAQAREHMP 157
BLAST of mRNA_Ecto-sp13_S_contig125.2080.1 vs. uniprot
Match: F5H8S9_CRYNB (UBC core domain-containing protein n=13 Tax=Cryptococcus TaxID=5206 RepID=F5H8S9_CRYNB) HSP 1 Score: 112 bits (280), Expect = 1.010e-29 Identity = 50/87 (57.47%), Postives = 66/87 (75.86%), Query Frame = 1
Query: 1 QPPRCKFMRPLLHPNLFPSGTVGLRMLDENEEWTPSTTIKQILQGIYELLAHPNIDDPAQSEAYHLFKNDREEYDRRVRMEAKKHPP 261
+PP+CKF PL HPN++PSGT+ L +LDE + W PS T+KQI GI +LL H N++DPAQ EAYH+FKNDR YD+R+R +A + P
Sbjct: 71 KPPKCKFDPPLFHPNVYPSGTICLSILDEEKSWKPSITVKQICLGIQDLLEHANVNDPAQVEAYHMFKNDRTSYDKRIRQQAVERRP 157
BLAST of mRNA_Ecto-sp13_S_contig125.2080.1 vs. uniprot
Match: A0A166NF79_EXIGL (Ubiquitin-conjugating enzyme 9 n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A166NF79_EXIGL) HSP 1 Score: 112 bits (280), Expect = 1.010e-29 Identity = 54/87 (62.07%), Postives = 67/87 (77.01%), Query Frame = 1
Query: 1 QPPRCKFMRPLLHPNLFPSGTVGLRMLDENEEWTPSTTIKQILQGIYELLAHPNIDDPAQSEAYHLFKNDREEYDRRVRMEAKKHPP 261
+PP+CKF PL HPN++PSGTV L +LDE + W P TIKQIL GI ELL PNI+DPAQSEAY LF+ND+ YDR++R +AK + P
Sbjct: 71 KPPKCKFSPPLFHPNVYPSGTVCLSILDEEKGWKPGITIKQILLGIQELLNDPNINDPAQSEAYTLFRNDKVAYDRKIRQQAKDNIP 157
BLAST of mRNA_Ecto-sp13_S_contig125.2080.1 vs. uniprot
Match: UBC9_PAGMA (SUMO-conjugating enzyme UBC9 n=3 Tax=Euteleostomi TaxID=117571 RepID=UBC9_PAGMA) HSP 1 Score: 111 bits (277), Expect = 2.870e-29 Identity = 53/87 (60.92%), Postives = 68/87 (78.16%), Query Frame = 1
Query: 4 PPRCKFMRPLLHPNLFPSGTVGLRMLDENEEWTPSTTIKQILQGIYELLAHPNIDDPAQSEAYHLFKNDREEYDRRVRMEAKKHPPA 264
PP+CKF PL HPN++PSGTV L +L+E+++W P+ TIKQIL GI ELL PNI DPAQ+EAY +F DR EY++RVR +AKK P+
Sbjct: 72 PPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIFCQDRTEYEKRVRAQAKKFSPS 158 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig125.2080.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig125.2080.1 >prot_Ecto-sp13_S_contig125.2080.1 ID=prot_Ecto-sp13_S_contig125.2080.1|Name=mRNA_Ecto-sp13_S_contig125.2080.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=84bp MRPLLHPNLFPSGTVGLRMLDENEEWTPSTTIKQILQGIYELLAHPNIDDback to top mRNA from alignment at Ecto-sp13_S_contig125:36167..37654+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig125.2080.1 ID=mRNA_Ecto-sp13_S_contig125.2080.1|Name=mRNA_Ecto-sp13_S_contig125.2080.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1488bp|location=Sequence derived from alignment at Ecto-sp13_S_contig125:36167..37654+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig125:36167..37654+ >mRNA_Ecto-sp13_S_contig125.2080.1 ID=mRNA_Ecto-sp13_S_contig125.2080.1|Name=mRNA_Ecto-sp13_S_contig125.2080.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=252bp|location=Sequence derived from alignment at Ecto-sp13_S_contig125:36167..37654+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |