prot_Ecto-sp13_S_contig91914.20770.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig91914.20770.1
Unique Nameprot_Ecto-sp13_S_contig91914.20770.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length176
Homology
BLAST of mRNA_Ecto-sp13_S_contig91914.20770.1 vs. uniprot
Match: A0A0H5BB96_9PHAE (Photosystem I P700 apoprotein A2 (Fragment) n=2 Tax=Phaeophyceae TaxID=2870 RepID=A0A0H5BB96_9PHAE)

HSP 1 Score: 356 bits (914), Expect = 5.440e-121
Identity = 165/176 (93.75%), Postives = 170/176 (96.59%), Query Frame = 0
Query:    1 HLVHVAIPESRGIHIGWDNFLTTLPHPEGLTPFFDGNWNVYSQNPDTVEHIFGTTTGAGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAVVFIIAGHMYRTNFAIGHNMKEILDAHRPPGGRLGVGHKGLFDTITNSLHMQLGLALAALGVITSLVAQHMYAIPPYAFMAKDFTTQ 176
            HLVHVAIPESRGIHIGW+NFLT+LPHPEGL PFFDGNWN+YSQNPD  EHIFGTT GAGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAVVFI+AGHMYRTNF IGHNMKEILDAHRPPGGRLG GH+GLFDTITNSLHMQLGLALAALGVITSLVAQHMYAIPPYAFMAKDFTTQ
Sbjct:  162 HLVHVAIPESRGIHIGWNNFLTSLPHPEGLKPFFDGNWNIYSQNPDGAEHIFGTTKGAGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAVVFIVAGHMYRTNFGIGHNMKEILDAHRPPGGRLGAGHRGLFDTITNSLHMQLGLALAALGVITSLVAQHMYAIPPYAFMAKDFTTQ 337          
BLAST of mRNA_Ecto-sp13_S_contig91914.20770.1 vs. uniprot
Match: A0A1Z4F594_9PHAE (Photosystem I (Fragment) n=38 Tax=Phaeophyceae TaxID=2870 RepID=A0A1Z4F594_9PHAE)

HSP 1 Score: 359 bits (922), Expect = 4.130e-120
Identity = 166/176 (94.32%), Postives = 172/176 (97.73%), Query Frame = 0
Query:    1 HLVHVAIPESRGIHIGWDNFLTTLPHPEGLTPFFDGNWNVYSQNPDTVEHIFGTTTGAGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAVVFIIAGHMYRTNFAIGHNMKEILDAHRPPGGRLGVGHKGLFDTITNSLHMQLGLALAALGVITSLVAQHMYAIPPYAFMAKDFTTQ 176
            HLVHVAIP SRGIH+GWDNFLTTLPHP+GLTPFFDGNWN YSQNPDTVEHIFGT+TGAGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAVVFIIAGHMYRTNFAIGHNMKEILDAHRPPGGRLG GH+GLFDTITNSLH+QLGLALA+LGV TSLVAQHMYAIPPYAFMAKDFTTQ
Sbjct:  179 HLVHVAIPASRGIHVGWDNFLTTLPHPDGLTPFFDGNWNAYSQNPDTVEHIFGTSTGAGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAVVFIIAGHMYRTNFAIGHNMKEILDAHRPPGGRLGAGHRGLFDTITNSLHIQLGLALASLGVTTSLVAQHMYAIPPYAFMAKDFTTQ 354          
BLAST of mRNA_Ecto-sp13_S_contig91914.20770.1 vs. uniprot
Match: A0A0H5BN86_DICDH (Photosystem I (Fragment) n=2 Tax=Dictyotaceae TaxID=2874 RepID=A0A0H5BN86_DICDH)

HSP 1 Score: 351 bits (900), Expect = 4.910e-119
Identity = 159/176 (90.34%), Postives = 171/176 (97.16%), Query Frame = 0
Query:    1 HLVHVAIPESRGIHIGWDNFLTTLPHPEGLTPFFDGNWNVYSQNPDTVEHIFGTTTGAGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAVVFIIAGHMYRTNFAIGHNMKEILDAHRPPGGRLGVGHKGLFDTITNSLHMQLGLALAALGVITSLVAQHMYAIPPYAFMAKDFTTQ 176
            HL+HVAIPESRG+HIGWDNFLTTLPHP GLT FFDGNW+ Y+QNPDT+ HIFGT TG+GTAILTFLGGFHPQSQSLWLTDIAHHHLAIAVVF+IAGHMYRTNFAIGHNMKEILDAHRPPGGRLG+GH+GLF+TITNSLHMQLGLALA++GVITSLVAQHMYAIPPYAFMAKDFTTQ
Sbjct:   10 HLIHVAIPESRGVHIGWDNFLTTLPHPNGLTSFFDGNWSAYAQNPDTINHIFGTNTGSGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAVVFLIAGHMYRTNFAIGHNMKEILDAHRPPGGRLGMGHRGLFETITNSLHMQLGLALASVGVITSLVAQHMYAIPPYAFMAKDFTTQ 185          
BLAST of mRNA_Ecto-sp13_S_contig91914.20770.1 vs. uniprot
Match: A0A0R6MFW0_UNDPI (Photosystem I P700 chlorophyll a apoprotein A2 n=71 Tax=Stramenopiles TaxID=33634 RepID=A0A0R6MFW0_UNDPI)

HSP 1 Score: 360 bits (924), Expect = 1.940e-118
Identity = 167/176 (94.89%), Postives = 171/176 (97.16%), Query Frame = 0
Query:    1 HLVHVAIPESRGIHIGWDNFLTTLPHPEGLTPFFDGNWNVYSQNPDTVEHIFGTTTGAGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAVVFIIAGHMYRTNFAIGHNMKEILDAHRPPGGRLGVGHKGLFDTITNSLHMQLGLALAALGVITSLVAQHMYAIPPYAFMAKDFTTQ 176
            HLVHVAIP SRGIH+GWDNFLTTLPHP+GLTPFFDGNWN YSQNPDTVEHIFGT TGAGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAVVFIIAGHMYRTNFAIGHNMKEILDAHRPPGGRLG GH+GLFDTITNSLH+QLGLALAALGV TSLVAQHMYAIPPYAFMAKDFTTQ
Sbjct:  193 HLVHVAIPASRGIHVGWDNFLTTLPHPDGLTPFFDGNWNAYSQNPDTVEHIFGTNTGAGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAVVFIIAGHMYRTNFAIGHNMKEILDAHRPPGGRLGAGHRGLFDTITNSLHIQLGLALAALGVTTSLVAQHMYAIPPYAFMAKDFTTQ 368          
BLAST of mRNA_Ecto-sp13_S_contig91914.20770.1 vs. uniprot
Match: A0A7T7IGN1_9STRA (PsaB (Fragment) n=1 Tax=Phaeothamnion wetherbeei TaxID=2569897 RepID=A0A7T7IGN1_9STRA)

HSP 1 Score: 344 bits (883), Expect = 4.910e-118
Identity = 155/176 (88.07%), Postives = 168/176 (95.45%), Query Frame = 0
Query:    1 HLVHVAIPESRGIHIGWDNFLTTLPHPEGLTPFFDGNWNVYSQNPDTVEHIFGTTTGAGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAVVFIIAGHMYRTNFAIGHNMKEILDAHRPPGGRLGVGHKGLFDTITNSLHMQLGLALAALGVITSLVAQHMYAIPPYAFMAKDFTTQ 176
            HLVHVAIPESRG H+GWDNFLTTLPHP GLTPFF GNWNVY+QNPDT +H+FGT+ G+G+AILTFLGGFHPQSQSLWLTD+AHHHLAIAV+FI+AGHMYRTNF IGHNMKEILDAHRPPGGRLG GH GLF+T+TNSLHMQLGLALA+LGVITSLVAQHMYAIPPYAFMAKDFTTQ
Sbjct:    4 HLVHVAIPESRGTHVGWDNFLTTLPHPLGLTPFFSGNWNVYAQNPDTTQHVFGTSEGSGSAILTFLGGFHPQSQSLWLTDMAHHHLAIAVIFIVAGHMYRTNFGIGHNMKEILDAHRPPGGRLGAGHVGLFETVTNSLHMQLGLALASLGVITSLVAQHMYAIPPYAFMAKDFTTQ 179          
BLAST of mRNA_Ecto-sp13_S_contig91914.20770.1 vs. uniprot
Match: A0A7T7DA56_9PHAE (Photosystem I (Fragment) n=1 Tax=Choristocarpus tenellus TaxID=116065 RepID=A0A7T7DA56_9PHAE)

HSP 1 Score: 348 bits (892), Expect = 6.000e-118
Identity = 160/176 (90.91%), Postives = 171/176 (97.16%), Query Frame = 0
Query:    1 HLVHVAIPESRGIHIGWDNFLTTLPHPEGLTPFFDGNWNVYSQNPDTVEHIFGTTTGAGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAVVFIIAGHMYRTNFAIGHNMKEILDAHRPPGGRLGVGHKGLFDTITNSLHMQLGLALAALGVITSLVAQHMYAIPPYAFMAKDFTTQ 176
            HLVHVAIPESRGIHIGW+NFLTT+PHPEGL PFF+GNWN Y+QNPDT EHIFGTTTGAGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAVVF+IAGHMYRTNF IGHNMKEILDAHRPPGGRLGVGH+GLF+TIT+SLHMQLGLALAALGVITSLVAQH+YA+ PYAFMAKD+TTQ
Sbjct:    8 HLVHVAIPESRGIHIGWNNFLTTVPHPEGLVPFFNGNWNAYAQNPDTSEHIFGTTTGAGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAVVFLIAGHMYRTNFGIGHNMKEILDAHRPPGGRLGVGHRGLFNTITDSLHMQLGLALAALGVITSLVAQHIYALSPYAFMAKDYTTQ 183          
BLAST of mRNA_Ecto-sp13_S_contig91914.20770.1 vs. uniprot
Match: A0A7T7DA64_9STRA (Photosystem I (Fragment) n=11 Tax=Ochrophyta TaxID=2696291 RepID=A0A7T7DA64_9STRA)

HSP 1 Score: 342 bits (878), Expect = 1.530e-115
Identity = 156/176 (88.64%), Postives = 165/176 (93.75%), Query Frame = 0
Query:    1 HLVHVAIPESRGIHIGWDNFLTTLPHPEGLTPFFDGNWNVYSQNPDTVEHIFGTTTGAGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAVVFIIAGHMYRTNFAIGHNMKEILDAHRPPGGRLGVGHKGLFDTITNSLHMQLGLALAALGVITSLVAQHMYAIPPYAFMAKDFTTQ 176
            HLVHVAIPESRG HIGWDNFLTT PHPEGL PFF GNWN Y+QNPDT +HIFGT  G+G+AILTFLGGFHPQ+QSLWLTDIAHHHLAIAVVFI+AGHMYRTNF IGHNMKEILDAHRPPGGRLG GH+GLFDTITNSLHMQLGLALAALGV+TSL AQHMYAIPPYAFM+KDFTTQ
Sbjct:   11 HLVHVAIPESRGTHIGWDNFLTTPPHPEGLAPFFSGNWNTYAQNPDTAQHIFGTNQGSGSAILTFLGGFHPQTQSLWLTDIAHHHLAIAVVFIVAGHMYRTNFGIGHNMKEILDAHRPPGGRLGDGHRGLFDTITNSLHMQLGLALAALGVVTSLTAQHMYAIPPYAFMSKDFTTQ 186          
BLAST of mRNA_Ecto-sp13_S_contig91914.20770.1 vs. uniprot
Match: A0A7T7IGM3_9STRA (Photosystem I P700 chlorophyll a apoprotein A2 n=3 Tax=Stichogloea TaxID=82160 RepID=A0A7T7IGM3_9STRA)

HSP 1 Score: 345 bits (885), Expect = 1.320e-112
Identity = 157/176 (89.20%), Postives = 168/176 (95.45%), Query Frame = 0
Query:    1 HLVHVAIPESRGIHIGWDNFLTTLPHPEGLTPFFDGNWNVYSQNPDTVEHIFGTTTGAGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAVVFIIAGHMYRTNFAIGHNMKEILDAHRPPGGRLGVGHKGLFDTITNSLHMQLGLALAALGVITSLVAQHMYAIPPYAFMAKDFTTQ 176
            HLVHVAIPESRGIH+GWDNFLTTLPHPEGL PFF GNWNVY+Q+PDT +HIFGT  G+G+AILTFLGGFHPQSQSLWLTD+AHHHLAIAV+FIIAGHMYRTNF IGHNMKEILDAHRPPGGRLG GH GLFDT+TNSLHMQLGLALA+LGVITSLVAQHMYAIPPYAFMAKDFTT+
Sbjct:  193 HLVHVAIPESRGIHVGWDNFLTTLPHPEGLAPFFSGNWNVYAQSPDTAQHIFGTGEGSGSAILTFLGGFHPQSQSLWLTDMAHHHLAIAVIFIIAGHMYRTNFGIGHNMKEILDAHRPPGGRLGAGHFGLFDTVTNSLHMQLGLALASLGVITSLVAQHMYAIPPYAFMAKDFTTE 368          
BLAST of mRNA_Ecto-sp13_S_contig91914.20770.1 vs. uniprot
Match: A0A0S2KSS3_9FLOR (Photosystem I (Fragment) n=35 Tax=Nemaliophycidae TaxID=2045258 RepID=A0A0S2KSS3_9FLOR)

HSP 1 Score: 331 bits (848), Expect = 7.190e-111
Identity = 149/176 (84.66%), Postives = 163/176 (92.61%), Query Frame = 0
Query:    1 HLVHVAIPESRGIHIGWDNFLTTLPHPEGLTPFFDGNWNVYSQNPDTVEHIFGTTTGAGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAVVFIIAGHMYRTNFAIGHNMKEILDAHRPPGGRLGVGHKGLFDTITNSLHMQLGLALAALGVITSLVAQHMYAIPPYAFMAKDFTTQ 176
            HLVHVAIPESRG H+GWDNF TTLPHP GL PFF GNW+ YS NPDTV HIFGT  GAGTAILTFLGGFHPQSQSLWLTD+AHHHLAIA++FI+AGHMY+TN+ IGHN+K+ILDAHRPP GRLG GHKGL+DTITNSLH+QLGLALA+LGVITSLVAQHMYA+PPYAFMAKDFTTQ
Sbjct:   21 HLVHVAIPESRGQHVGWDNFTTTLPHPSGLQPFFTGNWSAYSNNPDTVNHIFGTNDGAGTAILTFLGGFHPQSQSLWLTDMAHHHLAIAIIFIVAGHMYKTNWGIGHNIKDILDAHRPPSGRLGSGHKGLYDTITNSLHIQLGLALASLGVITSLVAQHMYAMPPYAFMAKDFTTQ 196          
BLAST of mRNA_Ecto-sp13_S_contig91914.20770.1 vs. uniprot
Match: A0A7T7DA72_9STRA (Photosystem I (Fragment) n=3 Tax=Ochrophyta TaxID=2696291 RepID=A0A7T7DA72_9STRA)

HSP 1 Score: 329 bits (844), Expect = 1.080e-110
Identity = 151/176 (85.80%), Postives = 163/176 (92.61%), Query Frame = 0
Query:    1 HLVHVAIPESRGIHIGWDNFLTTLPHPEGLTPFFDGNWNVYSQNPDTVEHIFGTTTGAGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAVVFIIAGHMYRTNFAIGHNMKEILDAHRPPGGRLGVGHKGLFDTITNSLHMQLGLALAALGVITSLVAQHMYAIPPYAFMAKDFTTQ 176
            HL+HVAIP SRGI +GWDNFLTT P+  GLTPFF+GNW+VY+QNPD+  HIFGTT GAGTAILTFLGGFHPQSQSLWLTDIAHHHLAIA+VFI+AGHMYRTNF IGH+MKEILDAHRPPGGRLG GH+GLFDTI  SLHMQLGLALA+LGV TSLVAQHMYAIPPYAFMAKDFTTQ
Sbjct:    7 HLIHVAIPASRGIRVGWDNFLTTPPYSSGLTPFFEGNWSVYAQNPDSGSHIFGTTQGAGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAIVFIVAGHMYRTNFHIGHDMKEILDAHRPPGGRLGTGHRGLFDTINESLHMQLGLALASLGVATSLVAQHMYAIPPYAFMAKDFTTQ 182          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig91914.20770.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0H5BB96_9PHAE5.440e-12193.75Photosystem I P700 apoprotein A2 (Fragment) n=2 Ta... [more]
A0A1Z4F594_9PHAE4.130e-12094.32Photosystem I (Fragment) n=38 Tax=Phaeophyceae Tax... [more]
A0A0H5BN86_DICDH4.910e-11990.34Photosystem I (Fragment) n=2 Tax=Dictyotaceae TaxI... [more]
A0A0R6MFW0_UNDPI1.940e-11894.89Photosystem I P700 chlorophyll a apoprotein A2 n=7... [more]
A0A7T7IGN1_9STRA4.910e-11888.07PsaB (Fragment) n=1 Tax=Phaeothamnion wetherbeei T... [more]
A0A7T7DA56_9PHAE6.000e-11890.91Photosystem I (Fragment) n=1 Tax=Choristocarpus te... [more]
A0A7T7DA64_9STRA1.530e-11588.64Photosystem I (Fragment) n=11 Tax=Ochrophyta TaxID... [more]
A0A7T7IGM3_9STRA1.320e-11289.20Photosystem I P700 chlorophyll a apoprotein A2 n=3... [more]
A0A0S2KSS3_9FLOR7.190e-11184.66Photosystem I (Fragment) n=35 Tax=Nemaliophycidae ... [more]
A0A7T7DA72_9STRA1.080e-11085.80Photosystem I (Fragment) n=3 Tax=Ochrophyta TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001280Photosystem I PsaA/PsaBPRINTSPR00257PHOTSYSPSAABcoord: 81..99
score: 84.21
coord: 138..161
score: 70.02
IPR001280Photosystem I PsaA/PsaBPFAMPF00223PsaA_PsaBcoord: 1..176
e-value: 2.9E-65
score: 220.9
IPR036408Photosystem I PsaA/PsaB superfamilyGENE3D1.20.1130.10coord: 1..176
e-value: 5.4E-74
score: 251.6
IPR036408Photosystem I PsaA/PsaB superfamilySUPERFAMILY81558Photosystem I subunits PsaA/PsaBcoord: 1..176
NoneNo IPR availablePANTHERPTHR30128:SF4coord: 1..176
NoneNo IPR availablePANTHERPTHR30128OUTER MEMBRANE PROTEIN, OMPA-RELATEDcoord: 1..176
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 100..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 138..157
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..69
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..80
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 158..176
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..99
NoneNo IPR availableTMHMMTMhelixcoord: 81..103
NoneNo IPR availableTMHMMTMhelixcoord: 142..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig91914contigEcto-sp13_S_contig91914:2..529 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig91914.20770.1mRNA_Ecto-sp13_S_contig91914.20770.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig91914 2..529 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig91914.20770.1 ID=prot_Ecto-sp13_S_contig91914.20770.1|Name=mRNA_Ecto-sp13_S_contig91914.20770.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=176bp
HLVHVAIPESRGIHIGWDNFLTTLPHPEGLTPFFDGNWNVYSQNPDTVEH
IFGTTTGAGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAVVFIIAGHMYR
TNFAIGHNMKEILDAHRPPGGRLGVGHKGLFDTITNSLHMQLGLALAALG
VITSLVAQHMYAIPPYAFMAKDFTTQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001280PSI_PsaA/B
IPR036408PSI_PsaA/B_sf