prot_Ecto-sp13_S_contig9183.20760.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9183.20760.1
Unique Nameprot_Ecto-sp13_S_contig9183.20760.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length397
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9183.20760.1 vs. uniprot
Match: A0A6H5L0M1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0M1_9PHAE)

HSP 1 Score: 452 bits (1162), Expect = 2.210e-151
Identity = 249/321 (77.57%), Postives = 257/321 (80.06%), Query Frame = 0 
Query:   77 MTSLXXXXXXXXXXXXXXXXXVPRTLCHAMHGNNYADXXXXXXXXXXVDNLDGPGQQQQHHCGGAPAGIGDDASTGRATFGEQGGGFEWLREFGNGKTDIAGLVLSTVLLMTAVGAPLGAAADLGVVDGRVLDPSALNHGPTAVHLNVHLNVDNAVPVTTAEKARNNRVGALNLGGLPRRRPPVTRVAGVEGEVGAAGEASSRRTGPLAQMAGDSMSAVRDIAHRAGAIAASRAPGRESVPGAPGPLRTAKPDVHKEPPPERTEDSGFVVSDDHSGTSLEEGAPSAERLTTANTVRFGKQVEDGTGAATKAARSDQLEELE 397
            MTSL                 VPRT CHAMHGNNYA           + NLD PGQQQQHH GG PAGIGDD    R TFGEQG GF WLREFGNGKTDIAGLVLSTVLLMTAVGAPLGAAADLGV DGRVL PS+LNHGPTAVHLNV    ++AVPV TAEKARNNRVGALNLGGLP R PPVTRVAGVE EVGA GEAS+RRTGPLAQMA DSMSAVRDIAHRAGAIAASR PGRESVPGAP PLRTAKPDVHKEP  E+TEDS  +V DDHSGTS E GAPSAERLTTAN VRFGKQVE GTGAA+KAAR DQLEELE
Sbjct:    1 MTSLPKRIRPVPLPEAVLATPVPRTRCHAMHGNNYAVDDDRAGGGDDIHNLDAPGQQQQHHYGGVPAGIGDDVYASRDTFGEQGVGFGWLREFGNGKTDIAGLVLSTVLLMTAVGAPLGAAADLGVGDGRVLGPSSLNHGPTAVHLNV----ESAVPVPTAEKARNNRVGALNLGGLPTRSPPVTRVAGVESEVGAGGEASTRRTGPLAQMARDSMSAVRDIAHRAGAIAASRTPGRESVPGAPWPLRTAKPDVHKEPSLEKTEDSRLIVRDDHSGTSFEGGAPSAERLTTANAVRFGKQVEHGTGAASKAARPDQLEELE 317
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BLAST of mRNA_Ecto-sp13_S_contig9183.20760.1 vs. uniprot
Match: D8LGV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGV8_ECTSI)

HSP 1 Score: 450 bits (1157), Expect = 3.040e-151
Identity = 247/322 (76.71%), Postives = 258/322 (80.12%), Query Frame = 0 
Query:   77 MTSLXXXXXXXXXXXXXXXXXVPRTLCHAMHGNNYA-DXXXXXXXXXXVDNLDGPGQQQQHHCGGAPAGIGDDASTGRATFGEQGGGFEWLREFGNGKTDIAGLVLSTVLLMTAVGAPLGAAADLGVVDGRVLDPSALNHGPTAVHLNVHLNVDNAVPVTTAEKARNNRVGALNLGGLPRRRPPVTRVAGVEGEVGAAGEASSRRTGPLAQMAGDSMSAVRDIAHRAGAIAASRAPGRESVPGAPGPLRTAKPDVHKEPPPERTEDSGFVVSDDHSGTSLEEGAPSAERLTTANTVRFGKQVEDGTGAATKAARSDQLEELE 397
            MTSL                 VPRT CHAMHGNNYA            + NLD PGQQ++HH GGAPAGIGDD +  R  FGEQGGGF WLREFGNGKTDIAGLVLSTVLLMTAVGAPLGAAADLGVVDGRVLDPS+L+HGPTAV LNV    +NAVPV TAEKAR NRVGALNLGGLP RRPPVTRVAGVE EVGA GEAS+RRTGPLA+MAGDSMSAVRDIAHRAGAIAASR PGRES PGAPGPLRTAKPDVHKEPPPE+TEDSG VV DDH  TSL+ G PSA R TT N VR G QVEDGTGAA KAARSDQLEELE
Sbjct:    1 MTSLPKRIRPVPLPEAVPATPVPRTRCHAMHGNNYAAHDDDRAGGRADIHNLDAPGQQERHHFGGAPAGIGDDVAASRDIFGEQGGGFGWLREFGNGKTDIAGLVLSTVLLMTAVGAPLGAAADLGVVDGRVLDPSSLSHGPTAVRLNV----ENAVPVPTAEKARANRVGALNLGGLPPRRPPVTRVAGVESEVGAVGEASTRRTGPLAKMAGDSMSAVRDIAHRAGAIAASRGPGRESAPGAPGPLRTAKPDVHKEPPPEKTEDSGSVVGDDHPHTSLQRGVPSAGRSTTVNAVRSGGQVEDGTGAAAKAARSDQLEELE 318
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9183.20760.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L0M1_9PHAE2.210e-15177.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGV8_ECTSI3.040e-15176.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..397
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..33
score: 0.682

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9183contigEcto-sp13_S_contig9183:90..2581 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9183.20760.1mRNA_Ecto-sp13_S_contig9183.20760.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9183 90..2581 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9183.20760.1 ID=prot_Ecto-sp13_S_contig9183.20760.1|Name=mRNA_Ecto-sp13_S_contig9183.20760.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=397bp
MPLAFKFSAIASLNAALQLLVLLRCTSITVVDAFVAFRPSASVSEIVWSR
TSHRRTDILPTSSTPPPLSSRPSRSHMTSLPKRIRTVPLPGAVSATPVPR
TLCHAMHGNNYADDDDRAGGGDDVDNLDGPGQQQQHHCGGAPAGIGDDAS
TGRATFGEQGGGFEWLREFGNGKTDIAGLVLSTVLLMTAVGAPLGAAADL
GVVDGRVLDPSALNHGPTAVHLNVHLNVDNAVPVTTAEKARNNRVGALNL
GGLPRRRPPVTRVAGVEGEVGAAGEASSRRTGPLAQMAGDSMSAVRDIAH
RAGAIAASRAPGRESVPGAPGPLRTAKPDVHKEPPPERTEDSGFVVSDDH
SGTSLEEGAPSAERLTTANTVRFGKQVEDGTGAATKAARSDQLEELE
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