prot_Ecto-sp13_S_contig9178.20749.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9178.20749.1
Unique Nameprot_Ecto-sp13_S_contig9178.20749.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length120
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9178.20749.1 vs. uniprot
Match: D8LJH5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH5_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 2.250e-30
Identity = 68/128 (53.12%), Postives = 85/128 (66.41%), Query Frame = 0 
Query:    2 FSANDNKRLDDVVLMAEKWIPVLTSFVGKGFDRKHISRNVFQ---------KGLGRIEQRLPALKNRSSVVNGDDSKTRAPRPPFVSTSGTVVPISKQVLQEYVLDSDVKGHHGRVMSLCLAVLVVAR 120
            FSANDNKRL  VV MAEKWIPVL SFVG  +    + R+VFQ         KG GRIE++ PAL N S++++G ++++    P FVSTS TVVP++KQVL EY+     KG+  RVM L  AVLVV R
Sbjct:   95 FSANDNKRLAAVVRMAEKWIPVLMSFVGGSYKDDGMGRDVFQTGITKKVFKKGFGRIERKFPALTNTSTLISGCNTRSGELIPAFVSTSTTVVPVNKQVLLEYIDPCTEKGYDARVMYLTFAVLVVDR 222
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9178.20749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJH5_ECTSI2.250e-3053.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9178contigEcto-sp13_S_contig9178:5869..6464 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9178.20749.1mRNA_Ecto-sp13_S_contig9178.20749.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9178 4891..6464 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9178.20749.1 ID=prot_Ecto-sp13_S_contig9178.20749.1|Name=mRNA_Ecto-sp13_S_contig9178.20749.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=120bp
MFSANDNKRLDDVVLMAEKWIPVLTSFVGKGFDRKHISRNVFQKGLGRIE
QRLPALKNRSSVVNGDDSKTRAPRPPFVSTSGTVVPISKQVLQEYVLDSD
VKGHHGRVMSLCLAVLVVAR
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