mRNA_Ecto-sp13_S_contig9163.20734.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9163.20734.1
Unique NamemRNA_Ecto-sp13_S_contig9163.20734.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig9163.20734.1 vs. uniprot
Match: D8LUD1_ECTSI (C3H1-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUD1_ECTSI)

HSP 1 Score: 852 bits (2200), Expect = 4.820e-309
Identity = 444/485 (91.55%), Postives = 452/485 (93.20%), Query Frame = 1
Query:  190 VAAITMSSAAEWRLFPPPLKPVQLSVGDKVFVRTKSAKEVGKKGVVCAIEKVEAAPVVAPAATSEPAEFSRGYHDPEGSNNCCSAEPPGGVAGAHSRASSCDVAGTTTWSNGDKQEKNPKRGKKFEDTRAVIRLPPRAGSPGKPPDYRARPSRLVRIYGSPPTGRSTAXXXXXXXXXXXXLTADTASFRLLAASQVRACDTVLEVGCSTGETTAILAKYVPKGRVVALDVGADMVERTKERLKLVSSENEVCADVAVHKMDPFLDPRGAVEAAEHETEAGIGKDGGGASRSTKGGGVDAVFIDIGGNREVRGVVRMIAFARTAFAQPPRLIVVKSQELVAELKASPNAAGNAGDDRATTPAVTVSEAGSYAKCGRISEGDLWFRELLARSTSARSSCNGNTERGGGDAMSGCSNRTTPKHFHPNKAPLRLSPTDGVTPICRYYNYHKEGCKKGGRCPFDHAVCHWCLRPGHVALSCENANGFNVP 1644
            +AAITMSSA EWRLFPPPLKP  LSVGD+VFVRTKSAKEVGKKGVVCAIEKVEA PVVAPAATSEPAE SRGYHDPEGSNNC SAEPPGGVAGAHSR SSCD AGTT W N D+QEKNPK+GKKFEDTRAVIRLPPRAGSPG PPDYRARPSRLVRIY SPP  RSTA XXXXXXXX   LTADTASFRLLAASQVRACD VLEVGCSTGETTAILAKYVPKGRVVALDVGADMVERTKERLKLVSSE+E+CADVAVHKMDPFLDPRGAVEAAEHETEAGIGKDGG ASR TKGGGVDAVFIDIGGNREVRGVVRMIAFARTAFAQPPRLIVVKSQELV ELKAS NA GNAGDD ATTPA TVSEAGSYA+CGRISEGDLWFRELLARSTSAR S N NTE GGGDA SGCSNRTTPKHFHPNKAPLRLSP DGVTPICRYYNYHKEGCKKGGRCPFDHAVCHWCLRPGH+ALSCENANGFNVP
Sbjct:    1 MAAITMSSAEEWRLFPPPLKPAPLSVGDEVFVRTKSAKEVGKKGVVCAIEKVEATPVVAPAATSEPAELSRGYHDPEGSNNCYSAEPPGGVAGAHSRTSSCDFAGTTIWRNVDRQEKNPKKGKKFEDTRAVIRLPPRAGSPGNPPDYRARPSRLVRIYRSPPADRSTAAXXXXXXXXL--LTADTASFRLLAASQVRACDAVLEVGCSTGETTAILAKYVPKGRVVALDVGADMVERTKERLKLVSSESEICADVAVHKMDPFLDPRGAVEAAEHETEAGIGKDGGDASRPTKGGGVDAVFIDIGGNREVRGVVRMIAFARTAFAQPPRLIVVKSQELVDELKASSNAVGNAGDDGATTPAATVSEAGSYAECGRISEGDLWFRELLARSTSARPSFNENTEGGGGDASSGCSNRTTPKHFHPNKAPLRLSPKDGVTPICRYYNYHKEGCKKGGRCPFDHAVCHWCLRPGHIALSCENANGFNVP 483          
BLAST of mRNA_Ecto-sp13_S_contig9163.20734.1 vs. uniprot
Match: B8BWX1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWX1_THAPS)

HSP 1 Score: 179 bits (455), Expect = 6.820e-47
Identity = 127/346 (36.71%), Postives = 173/346 (50.00%), Query Frame = 1
Query:  739 DTASFRLLAASQVRACDTVLEVGCSTGETTAILAKYV----------------------------PKGRVVALDVGADMVERTKERLK-----LVSSENEVCADVA--------VHKMDPFLDPRGAVEAAEHETEAGIGKDGGGASRSTKGGGVDAVFIDIGGNREVRGVVRMIAFARTAFAQPP-RLIVVKSQELVAELKA-SPNAAGNAGDDRATTPAVTVSEAGSYAKCGRISEGDLWFRELLARSTSARSSCNGNTERGGGDAMSGCSNRTTPKHFHPNKAPLRLSPTDGVTPICRYYNYHKEGCKK------GGRCPFDHAVCHWCLRPGHVALSCENAN 1629
            DT ++R LA S +R  D+VLE+GCSTGE TA++ + +                            PKGRVV  D G DM+++T++RL      L+  +  V  + +        +HK+D F DP+GA   A             G+S ++     D + IDIGGNRE++GVV MI + +TAF Q P R+I+VKS+ LV +L+  +    GNA  +  T P V         K G +  G  W   L        SS   +T      A +  S +  PK+ HP KAPL LSP D  TPICR++NY K GCK+        +CPFDH  CHWC   GHVALSC   +
Sbjct:  140 DTTNYRQLATSHLRHGDSVLEIGCSTGECTALILRRLVLFHLHEMRQXXXXXXXXXXPNDEVVTTPKGRVVGFDTGGDMIQQTQQRLHAELEHLLPKDTSVQLNASEAYSQLINLHKVDAFADPKGAHSMAV------------GSSNTSP----DVILIDIGGNRELKGVVNMIHWVQTAFMQQPARVIIVKSESLVEKLEQHTVKDKGNAILNINTKPQVL--------KDGVVENGQEWLTLL-------HSSYKADTLLLTASAENTSSGQLPPKYSHPLKAPLVLSPKDDQTPICRFHNYGKHGCKRISNNNENEKCPFDHEHCHWCRNVGHVALSCSGTD 454          
BLAST of mRNA_Ecto-sp13_S_contig9163.20734.1 vs. uniprot
Match: A0A7S2LZT0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LZT0_9STRA)

HSP 1 Score: 152 bits (385), Expect = 3.920e-37
Identity = 117/373 (31.37%), Postives = 172/373 (46.11%), Query Frame = 1
Query:  637 RPSRLVRIYGSPPTGRSTAXXXXXXXXXXXXLTADTASFRLLAASQVRACDTVLEVGCSTGETTAILAKY-----------------VPKGRVVALDVGADMVERTKERLK---------LVSSENEVCADVAVHKMDPFLDPRGAVE-AAEHETEAGIGKDGGGASRSTKGGGVDAVFIDIGGNREVRGVVRMIAFARTAFA-QPPRLIVVKSQELVAELKASPNAAGNAGDDRATTPAVTVSEAGSYAKCGRISEGDLWFRELLARSTSARSSCNGNTERGGGDAMSGCSNRTTPKHFHPNKAPLRLSPTDGVTPICRYYNYHKEGCKK----------------GGRCPFDHAVCHWCLRPGHVALSCEN 1623
            RPSRLV +Y                      LT DT ++R LA S +R  D VLE+GCSTGE TA+L +                  V  G +V  D GA ++++   RL+         L + ++     + +H++D   DP+GA   A  + T  G+                  V IDIGGNR++  VVRMI + +TAF  + PRLI+VKS+ L  EL  +  ++    ++ ++ P+VT          G I+ G  WF  L + S  A        ++  G  +S    +   ++ HP K PL LSP  G+ PICRY+NYH +GC K                  +C +DH  CHWC   GH+A++C +
Sbjct:  113 RPSRLVPVYDL----HLKNNKIDKDAESLVLLTPDTTTYRQLATSHLRPNDYVLEIGCSTGECTALLLRRNLLLQSQNLRQIEQHNNVVLGNIVGFDTGAKILKQADNRLRREYNQSATTLATDDDAYSKLIQLHRVDALADPKGAYALATSNNTCPGM------------------VLIDIGGNRQLESVVRMIQWVQTAFKDERPRLILVKSEALENELSTALRSSHTDDNNDSSVPSVTDE--------GTITNGQNWFNSLESPSIVA--------DKEAGKCLS--RQQLLSRYSHPKKVPLVLSPK-GI-PICRYHNYHPDGCTKFIKSKSTGTVADEDEDDLQCQYDHEYCHWCQDAGHIAVNCPS 443          
BLAST of mRNA_Ecto-sp13_S_contig9163.20734.1 vs. uniprot
Match: A0A1Z5J8X0_FISSO (C3H1-type domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J8X0_FISSO)

HSP 1 Score: 148 bits (374), Expect = 4.410e-37
Identity = 112/328 (34.15%), Postives = 147/328 (44.82%), Query Frame = 1
Query:  643 SRLVRIYGSPPTGRSTAXXXXXXXXXXXXLTADTASFRLLAASQVRACDTVLEVGCSTGETTAILAKYVPKGRVVALDVGADMVERTKERLKLVSSENEVCADVAVHKMDPFLDPRGAVEAAEHETEAGIGKDGGGASRSTKGGGVDAVFIDIGGNREVRGVVRMIAFARTAFAQPPRLIVVKSQELVAELKASPNAAGNAGDDRATTPAVTVSEAGSYAKCGRISEGDLWFRELLARSTSARSSCNGNTERGGGDAMSGCSNRTTPKHFHPNKAPLRLSPTDGVTPICRYYNYHKEGCKKGGRCPFDHAVCHWCLRPGHVALSCENA 1626
            +R++ I  S  + ++              +TA+T  +R LA SQV + DTVLE+GCSTGET+ +L K       V  D  A+M ERT    K  SS   +C      KM+  L+P  A +                           AV++DIGGNRE+ GV RM+ +  TA     +LIVVKS+EL  EL + P                 V   G     G          E L            N +R          +R  P+H  P +AP   SP D   PICRY+NYHK+GC+KG  CPFDH  CH CL  GHVA+SC  +
Sbjct:   31 NRMIPILSSSSSSKTENHHEKDNDTLSVIITAETKYYRQLATSQVCSPDTVLEIGCSTGETSKVLWKRASSW--VGFDTSAEMTERTMS--KNTSSCRRLC-----QKMNALLEPALAYQTVHQHQPV-----------------TTAVWMDIGGNREMNGVARMLHWILTAPFPALQLIVVKSKELARELSSIP-----------------VDSKGILQMDGM---------EFL------------NKKR--------LDSRRLPRH--PQQAPKVYSPIDPSLPICRYHNYHKKGCRKGSDCPFDHVHCHMCLEAGHVAMSCAKS 284          
BLAST of mRNA_Ecto-sp13_S_contig9163.20734.1 vs. uniprot
Match: A0A1Z5K7X1_FISSO (C3H1-type domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7X1_FISSO)

HSP 1 Score: 140 bits (352), Expect = 1.760e-33
Identity = 105/298 (35.23%), Postives = 136/298 (45.64%), Query Frame = 1
Query:  730 LTADTASFRLLAASQVRACDTVLEVGCSTGETTAILAKYVPKGRVVALDVGADMVERTKERLKLVSSENEVCADVAVHKMDPFLDPRGAVEAAEHETEAGIGKDGGGASRSTKGGGVDAVFIDIGGNREVRGVVRMIAFARTAFAQPPRLIVVKSQELVAELKASPNAAGNAGDDRATTPAVTVSEAGSYAKCGR--ISEGDLWFRELLARSTSARSSCNGNTERGGGDAMSGCSNRTTPKHFHPNKAPLRLSPTDGVTPICRYYNYHKEGCKKGGRCPFDHAVCHWCLRPGHVALSC 1617
            +TA T  +R LAASQ+   D VLE+GCSTGET+ I+         +  D  A+M ERT    K  SS + VC      KM+   +P  A +       A                   AV++DIGGNR++ GV RM+ +  T+     RLIVVKS+ELV EL + P                 V+  G     G   +++  L F  L                               P+H  P +AP   SPTD   PICRY+NYHK+GC KG  CPFDH  CH CL  GHVA++C
Sbjct:  109 ITAATKHYRQLAASQLCPQDAVLEIGCSTGETSEIIWNRASSW--IGWDTSAEMTERTMS--KHSSSCHRVC-----QKMNALSEPALAYQTVHQHQPA-----------------TTAVWMDIGGNRDMNGVARMLHWILTSPFPALRLIVVKSEELVRELSSVP-----------------VNSEGILQMDGMEFLNQKRLEFCRL-------------------------------PRH--PQQAPKVYSPTDPSLPICRYHNYHKKGCGKGSDCPFDHVHCHMCLEAGHVAMNC 330          
BLAST of mRNA_Ecto-sp13_S_contig9163.20734.1 vs. uniprot
Match: A0A7S3V7C4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V7C4_9STRA)

HSP 1 Score: 140 bits (354), Expect = 6.050e-33
Identity = 113/353 (32.01%), Postives = 159/353 (45.04%), Query Frame = 1
Query:  637 RPSRLVRIYGSPPTGRSTAXXXXXXXXXXXXLTADTASFRLLAASQVRACDTVLEVGCSTGETTAILAKYVPKGRVVALDVGADMVERTKERL--------KLVSSEN-EVCAD------VAVHKMDPFLDPRGAVEAAEHETEAGIGKDGGGASRSTKGGGVDAVFIDIGGNREVRGVVRMIAFARTAFAQPPRLIVVKSQELVAELKASPNA---AGNAGDD------RATTPAVTVSEAG-SYAKCGRISEGDLWFRELLARSTSARSSCNGNTERGGGDAMSGCSNRTTPKHFHPNKAPLRLSPTDGVTPICRYYNYHKEGCKKGGRCPFDHAVCHWCLRPGHVALSCE 1620
            RP+ ++ IYG+    +               LT  T  +R LAASQ+   D VLE+GCS GE +  + KY+ KG  +  D+   M+   K++         KL   E  E+         V    +DPF DP+ A + A   T     +DG       K      +FIDIGGNRE+  V RMI++A+  F   PRL ++KS+ ++  L         +G  G+       R        S A  +  K G +  G+ WF  ++        +               C+  T P   HP KAPL LSP     PICR++NY ++GCKK   CPFDH  CH C +PGH AL C+
Sbjct:  113 RPASIIPIYGTRTRNK-------------IILTECTDQYRKLAASQLLENDHVLEIGCSNGECSLYIDKYLQKGTFIGFDISQKMIAEAKDKFSGRDGIPTKLEWDEKAELWRQYGDDNYVKFFTIDPFTDPQRAYKYAT--TIDSRNEDGNIKGVEIK---PTVIFIDIGGNRELDPVARMISWAKENFN--PRLCIIKSEAMMQNLNECQEKYRQSGGLGEGKESKLKRQKLDKEQKSRANVAVKKNGVVVNGEDWFENIVKNPNDVSDTVGVR-----------CNPCTAPGFIHPLKAPLSLSPITNQ-PICRFHNYAEKGCKKKDACPFDHIHCHLCKKPGHRALDCK 433          
BLAST of mRNA_Ecto-sp13_S_contig9163.20734.1 vs. uniprot
Match: A0A7S4KYP7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KYP7_9EUKA)

HSP 1 Score: 127 bits (318), Expect = 1.030e-30
Identity = 72/169 (42.60%), Postives = 92/169 (54.44%), Query Frame = 1
Query: 1090 FIDIGGNREVRGVVRMIAFARTAFAQPPRLIVVKSQELVAELKASPNAAGNAGDDRATTPAVTVSEAGSYAKCGRISE-GDLWFRELLARSTSARSSCNGNTERGGGDAMSGCSNRTTPKHFHPNKAPLRLSPTDGVTPICRYYNYHKEGCKKGGRCPFDHAVCHWCLR 1593
            FIDIGGNRE+ GV RMI F RTAF  PPRLI+VKS+ ++AELK +                      GS A C  + E GD WF+ELLA+  S         +R              P++F P +A +R  P  GV PICR++NYH  GC K   CP++H +CHWCL+
Sbjct:   25 FIDIGGNRELDGVTRMIRFVRTAFTPPPRLIIVKSKAMIAELKKT---------------------HGSMASCLDVIENGDSWFQELLAKEGSPHGEGKPTEKR-------------LPRYFRPLEAAMRKDPA-GV-PICRFHNYHPSGCLKSANCPYNHNICHWCLK 157          
BLAST of mRNA_Ecto-sp13_S_contig9163.20734.1 vs. uniprot
Match: A0A7S2E4J6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E4J6_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.140e-27
Identity = 77/234 (32.91%), Postives = 108/234 (46.15%), Query Frame = 1
Query: 1081 DAVFIDIGGNREVRGVVRMIAFARTAFAQPPRLIVVKSQELVAELKASPNAAGNA------------GDDRATTPAVTVSEAGS-----------------------------------YAKCGRISEGDLWFRELLARSTSARSSCN---GNTERGGGDAMSGCSNRTTPKHFHPNKAPLRLSPTDGVTPICRYYNYHKEGCKK---GGRCPFDHAVCHWCLRPGHVALSCEN 1623
            + +FIDIGGNR +  VV+MI + +  F+  PR+IVVKS+ELV E+    N                   ++ T P     EA                                       K G+I +G+ WF++L+ +      + N     T +    + S  + +  P + HP KAP+  SPTD   PICRY+NYHK+GCK+      CP DH  CHWCL+PGH+AL C N
Sbjct:   20 NCIFIDIGGNRALHSVVQMITWVQNEFS--PRIIVVKSEELVEEIVGKDNGEEERYLKKKMKRMKVKAKNKDTVPDQFQQEAKKRKVNDESIHGCTKEQQQQHDHCKTETCKKTMKNVHVLKNGQIQKGNEWFKKLVHQCMEEHDNTNHDSSTTTKTDERSTSINTQQQQPYYIHPLKAPITYSPTDASKPICRYHNYHKDGCKRYKTDESCPLDHTFCHWCLQPGHIALDCVN 251          
BLAST of mRNA_Ecto-sp13_S_contig9163.20734.1 vs. uniprot
Match: B7G665_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G665_PHATC)

HSP 1 Score: 115 bits (287), Expect = 2.630e-24
Identity = 101/308 (32.79%), Postives = 132/308 (42.86%), Query Frame = 1
Query:  739 DTASFRLLAASQVRACDTVLEVGCSTGETTAILAKYVPKGRV---VALDVGADMVERTKERLKLV-SSENEVCADVAVHKMDPFLDPRGA-VEAAEHETEAGIGKDGGGASRSTKGGGVDAVFIDIGGNREVRGVVRMIAFARTAFA----------QPPRLIVVKSQELVAELKASPNAAGNAGDDRATTPAVTVSEAGSYAKCGRISEGDLWFRELLARSTSARSSCNGNTERGGGDAMSGCSNRTTPKHFHPNKAPLRLSPTDGVTPICRYYNYHKEGCKKGGRCPFDHAVCHWCLRPGHVALSC 1617
            DTASFR  A +     D VLE+GCSTG+T+    +   K RV   V +D  +DMV+RT+  L+   ++     A+  V   D  L P  A +EA +                    G    VF+DIGGNR + GVV M+ +  T             QP RL++VKSQ L   L           D+  T P        S   C R      WF + L ++ +A                      T P+H  P +A L  SP     PICRY+NY    C+K   CP DH  CH C RPGH+AL C
Sbjct:  115 DTASFRHWAVAWSGPTDRVLEIGCSTGQTS----RAFWKARVSSWVGMDTSSDMVQRTRIALQQQDTATGSARANYRVCHCDALLHPNQAELEARQF-------------------GPPTLVFVDIGGNRNLSGVVLMLDWVLTRSVGVEKRSSGERQPTRLVLVKSQALARALSLFHT------DNNRTLPESPNENLASQEFCRR------WFEDQLRQAQTA----------------------TLPRH--PLQASLVYSPISATQPICRYHNY--STCQKVETCPLDHRHCHLCQRPGHIALRC 361          
BLAST of mRNA_Ecto-sp13_S_contig9163.20734.1 vs. uniprot
Match: A0A448ZQZ2_9STRA (CCHC-type domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQZ2_9STRA)

HSP 1 Score: 116 bits (290), Expect = 8.250e-24
Identity = 96/355 (27.04%), Postives = 142/355 (40.00%), Query Frame = 1
Query:  730 LTADTASFRLLAASQVR----ACDTVLEVGCSTGETTAILAKYVPKGRV---------------VALDVGADMVERTKERLKLVSSE----NEVCADVAVHKMDPFLDPRGAVEAAEHETEAGIGKDGGGASRSTKGGGVDAVFIDIGGNREVRGVVRMIAFARTAFAQPP-------------RLIVVKSQELVAELKASPNAAGNAGDDRATTPAVTVSEAGSYAKCGRISEGDLWFRELLARSTSARSSCNGNTERGGGDAMSGCSNRTTPKHF-HPNKAPLRLSPTDGVTPICRYYNYHKEGCK----------------------KGGRCPFDHAVCHWCLRPGHVALSC 1617
            L  +T  FR +   Q+     A D VLE+GCSTG  + ++ K    G +               + +D   +M+++  E L    S      E      + ++D   +P+ AV    H                        V IDIGGNRE   V++ I++   +F +               R+++VKS+ LV  L +     G  GD     P++  +     +  G +  G  WF   L R                 DA     + T    F HP +AP+ LSP DG+TPICRY+NYH++GC+                      K G CPFDH  CH CL+ GH+A +C
Sbjct:  269 LVEETLPFRRVVRYQLHSNAIASDRVLEIGCSTGALSQLVWKNHRYGALRNANKNDKEGAGASWIGMDHSQEMIDKCAEALAAHESRAVPGEEPPYSTKLVRVDALAEPQRAVREVGHPPTV--------------------VLIDIGGNRECGPVIQTISWVLESFGKVTSTATQGSSRNPSLRMVIVKSRALVRRLLSECCPTGVGGD-----PSLHANGTHLDSARGLLWNGSEWFSSALER-----------------DAKQRVESATVQNRFKHPLRAPMALSPVDGITPICRYHNYHRDGCRWYNSLKDEDGLTPACSIVSADVKSGSCPFDHDHCHACLQKGHIARNC 581          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9163.20734.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUD1_ECTSI4.820e-30991.55C3H1-type domain-containing protein n=2 Tax=Ectoca... [more]
B8BWX1_THAPS6.820e-4736.71Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2LZT0_9STRA3.920e-3731.37Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A1Z5J8X0_FISSO4.410e-3734.15C3H1-type domain-containing protein n=1 Tax=Fistul... [more]
A0A1Z5K7X1_FISSO1.760e-3335.23C3H1-type domain-containing protein n=1 Tax=Fistul... [more]
A0A7S3V7C4_9STRA6.050e-3332.01Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S4KYP7_9EUKA1.030e-3042.60Hypothetical protein (Fragment) n=1 Tax=Paramoeba ... [more]
A0A7S2E4J6_9STRA1.140e-2732.91Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
B7G665_PHATC2.630e-2432.79Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A448ZQZ2_9STRA8.250e-2427.04CCHC-type domain-containing protein n=1 Tax=Pseudo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9163contigEcto-sp13_S_contig9163:931..3351 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score850.9
Seed ortholog evalue2.9e-244
Seed eggNOG ortholog2880.D8LUD1
Model size1650
Hectar predicted targeting categoryother localisation
Exons2
EggNOG OGs2E3GK@1,2SAJ2@2759
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-14_004520.1
Cds size1446
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464188.1231606-CDS-Ecto-sp13_S_contig9163:930..23761681464188.1231606-CDS-Ecto-sp13_S_contig9163:930..2376Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9163 931..2376 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464188.1352844-UTR-Ecto-sp13_S_contig9163:2376..24111681464188.1352844-UTR-Ecto-sp13_S_contig9163:2376..2411Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9163 2377..2411 -
1681464188.1471653-UTR-Ecto-sp13_S_contig9163:3182..33511681464188.1471653-UTR-Ecto-sp13_S_contig9163:3182..3351Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9163 3183..3351 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9163.20734.1prot_Ecto-sp13_S_contig9163.20734.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9163 931..2376 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9163.20734.1

>prot_Ecto-sp13_S_contig9163.20734.1 ID=prot_Ecto-sp13_S_contig9163.20734.1|Name=mRNA_Ecto-sp13_S_contig9163.20734.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=482bp
MSSAAEWRLFPPPLKPVQLSVGDKVFVRTKSAKEVGKKGVVCAIEKVEAA
PVVAPAATSEPAEFSRGYHDPEGSNNCCSAEPPGGVAGAHSRASSCDVAG
TTTWSNGDKQEKNPKRGKKFEDTRAVIRLPPRAGSPGKPPDYRARPSRLV
RIYGSPPTGRSTAAAAAAAPPLLILLTADTASFRLLAASQVRACDTVLEV
GCSTGETTAILAKYVPKGRVVALDVGADMVERTKERLKLVSSENEVCADV
AVHKMDPFLDPRGAVEAAEHETEAGIGKDGGGASRSTKGGGVDAVFIDIG
GNREVRGVVRMIAFARTAFAQPPRLIVVKSQELVAELKASPNAAGNAGDD
RATTPAVTVSEAGSYAKCGRISEGDLWFRELLARSTSARSSCNGNTERGG
GDAMSGCSNRTTPKHFHPNKAPLRLSPTDGVTPICRYYNYHKEGCKKGGR
CPFDHAVCHWCLRPGHVALSCENANGFNVPR*
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mRNA from alignment at Ecto-sp13_S_contig9163:931..3351-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9163.20734.1 ID=mRNA_Ecto-sp13_S_contig9163.20734.1|Name=mRNA_Ecto-sp13_S_contig9163.20734.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2421bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9163:931..3351- (Ectocarpus species13 EcNAP12_S_4_19m)
CTCCGCTGTTTGGCTGTTCCCCATCAACTCGAGTTTCTCTCGTCCCACCT CATTCTTGGCTCGACTTCCGTCGACCGACAGAGACTGCCGTCGACATTGG CATTGGCTTGCAGCGGAAATAGGCTGGTGGACGCTCTTCTCTGGCTCTCT GGATTGCTACCTTGAGTAGGTACGCGACGACGGCTTTTCTCATTGGAAGG TGGCAAGCAGAGCGCTGATGGTTAAACTAGCGATCACGTAATAGGTGTGC TCCGCACCTGTTTGCATGTTCTTGCGTGCGGGGCACAGCAGTGTTCCAAG CAGAGTGACTGCTGGAGGCCTGCTTACCTCATTGTACGTTTGCACGAACA ACTGCAGTCACTGCTTGTTCACACGCTGTAGGCGACTCCAGTGCTTCAAC TGACTGCTGCATGTAGGCTTTCTTTCGCGCACGGCCTCGGCTCTCTAGTT GTTGTCCTCGTCACAGCGTTTTGCGTGTTCCTTCTAGTTGCTACCTAGCA TTAGAAGGCAAACCTATTCGCCCAGTTTTGCCTCCATCCATTAGGTAGAT AAATTGGTAGCAGCACGCACATGTATTTTGCCTAGCTTTTCGTTCCAGTG GTTATCTGGCATTTGAACTGTTTAGAAAAAGTGTACAATACTTGTAGCTG CCATCTGCAGAAACGATTTTTTTTTTCCATGGATGTGGGTCTTGCAATTC GACTGAGCGCAACTACTACGCGGACTATTTCGCCGGCGGAAGCAACACCG TGTTGTTCCCCATCCACAACTGCACTCACAGTTTGCACTCAGAACCGAAC GTTTCTTGCAATTCAATTATGCAAAGTGTCATGTGGAGGCCGTTCCATGC TTACTCTTTCATTACATGTCGAAGCGCCACCACCAGAGAATAGAAGTAGC CTGACTTGACCAACACCGTGACACGTTCTTCCTACTGTAGGAGCTTCCGT CGGACCACACGTTGCCGCCATCACCATGAGTAGCGCCGCAGAGTGGAGGC TGTTCCCCCCGCCTCTGAAACCGGTCCAGCTGTCCGTCGGGGACAAGGTT TTCGTGCGCACAAAGTCGGCCAAGGAGGTCGGGAAGAAGGGAGTCGTCTG CGCTATCGAGAAGGTGGAAGCGGCACCCGTTGTCGCTCCTGCGGCAACGA GCGAACCCGCGGAGTTCTCGAGAGGATATCATGACCCCGAAGGAAGCAAC AACTGTTGTTCAGCCGAGCCTCCGGGTGGAGTAGCAGGCGCGCATAGCCG GGCCAGTAGCTGCGACGTCGCCGGGACTACCACCTGGAGCAACGGCGACA AGCAGGAGAAGAATCCGAAAAGGGGAAAGAAGTTTGAGGACACGAGGGCG GTGATTCGATTACCACCCCGCGCCGGCAGCCCGGGCAAGCCGCCCGACTA CCGTGCCCGCCCATCGAGATTAGTACGCATCTACGGGTCGCCGCCTACCG GCAGGTCGACCGCCGCCGCCGCCGCCGCCGCCCCGCCCCTCCTCATCCTC CTCACGGCCGACACGGCATCTTTCCGCCTTCTCGCCGCTTCACAGGTTCG AGCGTGCGACACTGTTCTAGAGGTAGGGTGCTCGACGGGGGAAACAACCG CCATCCTCGCCAAGTATGTGCCTAAGGGTCGCGTTGTGGCCTTGGATGTC GGGGCTGACATGGTGGAACGGACGAAGGAGAGGCTGAAACTAGTATCGTC GGAGAACGAAGTTTGCGCCGACGTGGCCGTTCACAAGATGGACCCGTTCC TCGATCCGCGAGGCGCCGTCGAGGCCGCGGAGCACGAGACGGAGGCGGGC ATCGGGAAGGACGGCGGTGGTGCTTCTCGCTCGACCAAGGGTGGCGGTGT GGATGCGGTTTTCATCGACATTGGGGGGAACCGTGAAGTGCGCGGTGTCG TCCGCATGATTGCTTTCGCACGAACGGCCTTCGCGCAACCTCCAAGGCTA ATCGTCGTCAAGAGCCAAGAACTGGTCGCCGAGCTGAAGGCAAGCCCCAA CGCGGCGGGGAACGCAGGCGACGACCGCGCCACAACTCCGGCGGTGACGG TGTCCGAGGCCGGCTCGTACGCCAAGTGTGGGAGAATATCTGAAGGGGAC TTGTGGTTCCGCGAACTGCTCGCACGAAGCACCTCTGCCAGGTCGTCCTG CAACGGAAATACGGAACGAGGCGGCGGAGACGCAATGAGCGGCTGCTCGA ACCGCACCACACCGAAGCACTTTCATCCAAACAAGGCCCCGTTGCGCTTG TCCCCAACGGACGGCGTCACGCCGATTTGTCGCTACTACAACTATCACAA GGAGGGTTGCAAGAAGGGTGGGAGGTGTCCGTTTGACCACGCTGTGTGTC ACTGGTGCCTCCGCCCGGGCCACGTTGCGTTGAGCTGCGAGAACGCGAAT GGATTCAACGTGCCGCGCTAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9163:931..3351-

>mRNA_Ecto-sp13_S_contig9163.20734.1 ID=mRNA_Ecto-sp13_S_contig9163.20734.1|Name=mRNA_Ecto-sp13_S_contig9163.20734.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1446bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9163:931..3351- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGTAGCGCCGCAGAGTGGAGGCTGTTCCCCCCGCCTCTGAAACCGGT
CCAGCTGTCCGTCGGGGACAAGGTTTTCGTGCGCACAAAGTCGGCCAAGG
AGGTCGGGAAGAAGGGAGTCGTCTGCGCTATCGAGAAGGTGGAAGCGGCA
CCCGTTGTCGCTCCTGCGGCAACGAGCGAACCCGCGGAGTTCTCGAGAGG
ATATCATGACCCCGAAGGAAGCAACAACTGTTGTTCAGCCGAGCCTCCGG
GTGGAGTAGCAGGCGCGCATAGCCGGGCCAGTAGCTGCGACGTCGCCGGG
ACTACCACCTGGAGCAACGGCGACAAGCAGGAGAAGAATCCGAAAAGGGG
AAAGAAGTTTGAGGACACGAGGGCGGTGATTCGATTACCACCCCGCGCCG
GCAGCCCGGGCAAGCCGCCCGACTACCGTGCCCGCCCATCGAGATTAGTA
CGCATCTACGGGTCGCCGCCTACCGGCAGGTCGACCGCCGCCGCCGCCGC
CGCCGCCCCGCCCCTCCTCATCCTCCTCACGGCCGACACGGCATCTTTCC
GCCTTCTCGCCGCTTCACAGGTTCGAGCGTGCGACACTGTTCTAGAGGTA
GGGTGCTCGACGGGGGAAACAACCGCCATCCTCGCCAAGTATGTGCCTAA
GGGTCGCGTTGTGGCCTTGGATGTCGGGGCTGACATGGTGGAACGGACGA
AGGAGAGGCTGAAACTAGTATCGTCGGAGAACGAAGTTTGCGCCGACGTG
GCCGTTCACAAGATGGACCCGTTCCTCGATCCGCGAGGCGCCGTCGAGGC
CGCGGAGCACGAGACGGAGGCGGGCATCGGGAAGGACGGCGGTGGTGCTT
CTCGCTCGACCAAGGGTGGCGGTGTGGATGCGGTTTTCATCGACATTGGG
GGGAACCGTGAAGTGCGCGGTGTCGTCCGCATGATTGCTTTCGCACGAAC
GGCCTTCGCGCAACCTCCAAGGCTAATCGTCGTCAAGAGCCAAGAACTGG
TCGCCGAGCTGAAGGCAAGCCCCAACGCGGCGGGGAACGCAGGCGACGAC
CGCGCCACAACTCCGGCGGTGACGGTGTCCGAGGCCGGCTCGTACGCCAA
GTGTGGGAGAATATCTGAAGGGGACTTGTGGTTCCGCGAACTGCTCGCAC
GAAGCACCTCTGCCAGGTCGTCCTGCAACGGAAATACGGAACGAGGCGGC
GGAGACGCAATGAGCGGCTGCTCGAACCGCACCACACCGAAGCACTTTCA
TCCAAACAAGGCCCCGTTGCGCTTGTCCCCAACGGACGGCGTCACGCCGA
TTTGTCGCTACTACAACTATCACAAGGAGGGTTGCAAGAAGGGTGGGAGG
TGTCCGTTTGACCACGCTGTGTGTCACTGGTGCCTCCGCCCGGGCCACGT
TGCGTTGAGCTGCGAGAACGCGAATGGATTCAACGTGCCGCGCTAA
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