prot_Ecto-sp13_S_contig9161.20732.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9161.20732.1
Unique Nameprot_Ecto-sp13_S_contig9161.20732.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length845
Homology
BLAST of mRNA_Ecto-sp13_S_contig9161.20732.1 vs. uniprot
Match: D8LU02_ECTSI (Xylosyltransferase, family GT77 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU02_ECTSI)

HSP 1 Score: 684 bits (1765), Expect = 2.850e-237
Identity = 351/474 (74.05%), Postives = 393/474 (82.91%), Query Frame = 0
Query:  378 MSDKFV---WCNRAMLMATGRDFMNHAE---ATKHERITFLDVIQGLVREPTAIGVVLVDGTKVIPSRYLHPPTKTAVEAIGRNSRGIGGRGQTNQFMYLQRLVQHAREKTERELQRRRTHRQPHPPPVGVKTSGSTAAPVPPTRELKALPEINFYIGALELTLGFDLEAMPRGPEDNTSIVRVVPDYGDSPTETGTTESGYQSGGEGKGHGIDNSARAKAPVATIVRALWPPKYILDTVVQPLFTPEEQEKRATSPTPALIENGSWGTSQRGRKQQGIVIVSSVNCGYLDMASNFLQSVKQAAGDVKVLFVARDEVAFDFLDALSPGCTVLFPEVVSEKIHSVQAGRWGDNIFKQQTIARPDLLLPILRRGYKALYTDVDMVWLGNALSLMPNPRETQTPPVEVMLQADSAKQKCTCFMYLDSTPNAIRLLELWKQEIAETSVFQNQAAFQSPLAQMQEAGLALSPFPEEVRM 845
            MSDKFV   WCNRAML+A GRDFMN  E     K ER TFL +IQGLVREP+A GVV+VDGTKVIPSRYLHPPT   VE IG +S G GGRGQ N+F++LQRLVQHAREK E E Q  R  +QP PPP GVKTSGSTAAPV  ++E + LPEIN+YIG LE TLGFDLEAMP G E+NT+  RV+P+ GDSPT TGTT+SGY S G+G+G   +N   A A VATI+RALWPP+YILDTV+QPLFT +E+E+RA S    L + GSWG SQR RKQQG+VIVSSVNCGYLDMASNFLQSV QAAGDVKVLFVARDEVAFDFLDALSPGCTV FPEV SE+ H++QAG+WGDNIFKQQT+ARPD+LLPILR+GYKALYTDVD+ WLGN LSL+PN R TQTPPVEV+LQAD AKQKCTCFMYLDSTPNAIRLLELWKQEIAE S FQ+Q AFQSPLAQMQEAGLAL   P+E  +
Sbjct:    1 MSDKFVAQVWCNRAMLVAAGRDFMNPTEPGLVAKRERTTFLHMIQGLVREPSAEGVVIVDGTKVIPSRYLHPPTTAGVEEIGGDSSGSGGRGQPNRFVFLQRLVQHAREKREHERQLHREQQQPQPPPEGVKTSGSTAAPVLTSQEFQPLPEINYYIGTLEFTLGFDLEAMPTGSENNTATARVLPNRGDSPTVTGTTKSGYHSVGDGEGDRAENGPGANASVATIMRALWPPEYILDTVIQPLFTKDEEEERAASSMVGLFDRGSWGASQRERKQQGVVIVSSVNCGYLDMASNFLQSVGQAAGDVKVLFVARDEVAFDFLDALSPGCTVFFPEVGSERAHAIQAGQWGDNIFKQQTVARPDILLPILRQGYKALYTDVDIFWLGNVLSLLPNSRVTQTPPVEVILQAD-AKQKCTCFMYLDSTPNAIRLLELWKQEIAEKSSFQDQRAFQSPLAQMQEAGLALQLLPKEAML 473          
BLAST of mRNA_Ecto-sp13_S_contig9161.20732.1 vs. uniprot
Match: A0A6H5K0G0_9PHAE (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0G0_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 2.570e-71
Identity = 174/413 (42.13%), Postives = 214/413 (51.82%), Query Frame = 0
Query:  495 PHPPPVGVKTSGSTAAPVPPTRELKALPEINFYIGALELTLGFDLEAMPR---------------------GPEDNTSIVRVVPDYGDSPTETGTTESGYQSGGEGKGHGIDNSARAKAP-------VATIVRALWPPKYILDTVVQPLFTPEEQEKRATSPTPALIENGS-----------------------WG---------TSQRGRKQQGIVIVSSVNCGYLDMASNFLQSVKQAAGDVKVLFVARDEVAFDFLDALSPGCTVLFP-EVVSEKIHSVQAGRWGDNIFKQQTIARPDLLLPILRRGYKALYTDVDMVWLGNALSLMPNPRETQTPP--VEVMLQADSAK-QKCTCFMYLDSTPNAIRLLELWKQEIAETSVFQNQAAFQSPLAQMQEAGLALSPFPEEV 843
            P P PV  ++ G+ A  + P +    LPE +FYIG L+L LGF   A PR                         N S+V V      +   TG  + G    G    +G                    IVRALWPP YIL+ V Q                                               W            + G   QG+V+V+SVNCGYLDMA NFL SV++A GDVKVLFVA DE +FDFLD LSPGC VLFP E  SE+  +V+AG+WGD IFK +T+ RPD+LL I+ +GYK L+TDVD+VWLGN L L+P+ ++  T     EVMLQ D     KCTCFMYLD TPNA  LLELWK+EI ET V QNQ AF++PLAQM++AGL L   P+EV
Sbjct: 1009 PLPLPVTGRSPGTAAPTISPGQRRLPLPEADFYIGTLDLALGFVEPARPRRKGTRTAAAAADASADSXXXXXXARNASVVAVA-----ARNSTGAVD-GIPVAGATTVNGXXXXXXXXXXXXXXXXXTVGIVRALWPPDYILENVAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWXXXXXXXXXXVGREGSGGQGMVVVTSVNCGYLDMAVNFLLSVRRAGGDVKVLFVAMDEASFDFLDDLSPGCVVLFPQEDGSERHRAVKAGQWGDEIFKHETVVRPDILLSIMAQGYKVLWTDVDIVWLGNPLPLLPDTQKNSTAAKCAEVMLQIDGKPINKCTCFMYLDCTPNAATLLELWKREIVETEVSQNQMAFRAPLAQMEQAGLNLEILPDEV 1415          
BLAST of mRNA_Ecto-sp13_S_contig9161.20732.1 vs. uniprot
Match: A0A8J9S3F8_9CHLO (Probable UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S3F8_9CHLO)

HSP 1 Score: 66.6 bits (161), Expect = 4.530e-8
Identity = 39/116 (33.62%), Postives = 66/116 (56.90%), Query Frame = 0
Query:  651 VIVSSVNCGYLDMASNFLQSVKQAAGDVKVLFVARDEVAFDFLDALSPGCTVLFPEVVSEKI-HSVQAG-RWGDNIFKQQTIARPDLLLPILRRGYKALYTDVDMVWLGNALSLMP 764
            VI++  +C YLD A N++  V+Q  G    L +  DE+AF++LD L PG  ++ P V+ ++  H+ +A   +G   F +    R  +   +L  G+  ++TD+D VWL +AL  +P
Sbjct:   46 VILTQASCPYLDFAENWILHVEQL-GVTNWLTIVDDEIAFNYLDKLFPG-HIVHPSVLFKRPRHTAKAYMHYGSKDFNEMMCERLRIQKHVLEMGFSFMWTDMDSVWLQDALKFIP 159          
BLAST of mRNA_Ecto-sp13_S_contig9161.20732.1 vs. uniprot
Match: A0A8B8A0F7_ACAPL (UDP-galactose:fucoside alpha-3-galactosyltransferase-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B8A0F7_ACAPL)

HSP 1 Score: 63.2 bits (152), Expect = 7.530e-7
Identity = 39/168 (23.21%), Postives = 77/168 (45.83%), Query Frame = 0
Query:  645 RKQQGIVIVSSVNCGYLDMASNFLQSVKQAAGDVKVLFVARDEVAFDFLDALSPGCTVLFPEVV-SEKIHSVQAGRWGDNIFKQQTIARPDLLLPILRRGYKALYTDVDMVWLGNALSLMPNPRET---QTPPVEVMLQADSAKQKCTCFMYLDSTPNAIRLLELWKQ 808
            +K+ G+V++++ N  Y+D+A N L SVK+    +    +A D  A+  L   + G   +  ++  S ++ +++  R   + +      R    L +L +G++ L+TD D  W  +         +     T P  ++ + D     C  F+YL  T   I+ ++ W Q
Sbjct:   83 KKRPGVVMMTTTNLAYVDVALNMLASVKRVGVCINTTIIAEDNKAYSLLKNYTTGDPAIHVQITNSGEMDTIEHKRTHSSQYYGIMNKRQAYFLSLLEKGFEVLFTDSDTFWFRDPFPYFKGDFDMFLRGTTPTRIIKRTDF----CAGFIYLKPTTATIQFVKTWTQ 246          
BLAST of mRNA_Ecto-sp13_S_contig9161.20732.1 vs. uniprot
Match: UPI00142567B8 (UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 3-like isoform X2 n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142567B8)

HSP 1 Score: 57.4 bits (137), Expect = 4.930e-5
Identity = 42/167 (25.15%), Postives = 71/167 (42.51%), Query Frame = 0
Query:  651 VIVSSVNCGYLDMASNFLQSVKQAAGDVKVLFVARDEVAFDFLDALSPGCTVLFPEVVSEKIHSVQAGR--WGDNIFKQQTIARPDLLLPILRRGYKALYTDVDMVWLGNALSLMPNPRETQTPPVEVMLQADSAKQK-------CTCFMYLDSTPNAIRLLELWKQ 808
            V++SS N G+LDMA N+L+S+K+      ++ VA DE A++ L +     T +        + S    +  +    +K+    RP  +   L++G    + DVD  WL +                +V+LQ D   +K       C   +Y  S+    R +  W Q
Sbjct:   70 VVLSSTNSGFLDMAINWLESIKKLGIRPNIILVAEDEEAYEKLKSYKDSTTYIRK---GSSLQSTNKSKLVYNTREYKKLVYRRPKYIYDELQKGKNVFFCDVDTFWLKDPFPYF-------VGDYDVILQRDVYFRKRRVPITYCAGMVYFRSSTPVNRFVYKWSQ 226          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9161.20732.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LU02_ECTSI2.850e-23774.05Xylosyltransferase, family GT77 n=1 Tax=Ectocarpus... [more]
A0A6H5K0G0_9PHAE2.570e-7142.13Nucleotid_trans domain-containing protein n=1 Tax=... [more]
A0A8J9S3F8_9CHLO4.530e-833.62Probable UDP-D-xylose:L-fucose alpha-1,3-D-xylosyl... [more]
A0A8B8A0F7_ACAPL7.530e-723.21UDP-galactose:fucoside alpha-3-galactosyltransfera... [more]
UPI00142567B84.930e-525.15UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransfera... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005069Nucleotide-diphospho-sugar transferasePFAMPF03407Nucleotid_transcoord: 679..829
e-value: 2.5E-18
score: 66.9
NoneNo IPR availablePANTHERPTHR47032FAMILY NOT NAMEDcoord: 623..830
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 85..845
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9161contigEcto-sp13_S_contig9161:1458..6054 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9161.20732.1mRNA_Ecto-sp13_S_contig9161.20732.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9161 1458..6054 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9161.20732.1 ID=prot_Ecto-sp13_S_contig9161.20732.1|Name=mRNA_Ecto-sp13_S_contig9161.20732.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=845bp
VVRPPSEAEALRAPEALLSMLQGTTSKGVNPNSGISNFEIGPHAESNINW
TTAGRRRNSTWDMLTTLSLHLFSLVGVLASLSVLTRKTGFRWSLAEERHH
RSGARSVNGSSSRSLEAHDGGGPGAFVGTTLSHEQPPGPAVVATCVAPPP
AMKSTALLVAVNNETLAIWSDFVSSAQKRVPGKRTPGKDISQKQELPCGN
DNAKPDCGTSKEEDKGETEEEHDCGKCCFPPVWIVTSDPRVDMVVREDMP
HLFSLLVPLDSDGSGDGTGGPNSQEDHTRWADMLDRFLSDNSEVDVIGAY
GEGALPTAVLRPDYLDSYFTASDVAGGGGGVGGDRSGISLVLWPVLSEAV
LPTSVISRSRMWWDRGDGGTRNGLGEWMSDKFVWCNRAMLMATGRDFMNH
AEATKHERITFLDVIQGLVREPTAIGVVLVDGTKVIPSRYLHPPTKTAVE
AIGRNSRGIGGRGQTNQFMYLQRLVQHAREKTERELQRRRTHRQPHPPPV
GVKTSGSTAAPVPPTRELKALPEINFYIGALELTLGFDLEAMPRGPEDNT
SIVRVVPDYGDSPTETGTTESGYQSGGEGKGHGIDNSARAKAPVATIVRA
LWPPKYILDTVVQPLFTPEEQEKRATSPTPALIENGSWGTSQRGRKQQGI
VIVSSVNCGYLDMASNFLQSVKQAAGDVKVLFVARDEVAFDFLDALSPGC
TVLFPEVVSEKIHSVQAGRWGDNIFKQQTIARPDLLLPILRRGYKALYTD
VDMVWLGNALSLMPNPRETQTPPVEVMLQADSAKQKCTCFMYLDSTPNAI
RLLELWKQEIAETSVFQNQAAFQSPLAQMQEAGLALSPFPEEVRM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005069Nucl-diP-sugar_transferase