mRNA_Ecto-sp13_S_contig12497.2073.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12497.2073.1
Unique NamemRNA_Ecto-sp13_S_contig12497.2073.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig12497.2073.1 vs. uniprot
Match: D7FNV1_ECTSI (Methyltransferase type 11 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNV1_ECTSI)

HSP 1 Score: 581 bits (1497), Expect = 1.210e-206
Identity = 313/339 (92.33%), Postives = 317/339 (93.51%), Query Frame = 1
Query:    1 MSRPPSSSVVVVFALVFSCTASAFLQSGQSLLLSHGTFGGSPATRRPSAHHRNADXXXXXXXXXXXXXXXXXXXXXXRSRMHTNAFSEEDSYATLAGLQEKEGSSGLGLNVVSKAIDTLFAFEPFFDYMVVEAREKIVKRSYTLGVGWAENVDGMRRNMDELQGEYDRLLDAKVSTPSYYYAPFHCYTEGNLSWQAALEVEPSAICVHADIYTGKKGVYERHGDDKLRGNFHQRMKEMLKVRPCGPEPKDILDIGCSTGLSTLKLAETFPSARITGVDLSPHMLAVGRYFLRTREEQRHARGRVEYLHAAGEMTGMGDASMDLVSLSLTSHELPAEATR 1017
            MS PPSSSVVVVFALVFSCTASAFLQSGQSLLLSHGT+GG+PA RRP AHH    XXXXXXXXXXX      XXXXXRSRMH NAFSEEDSYATLAGL+EK+GSS LGL VVSKAIDTLFAFEPFFDYMVVEAREKIVKRSYTLGVGWAENVDGMRRNMDELQGEYDRLLDAKVSTPSYYYAPFHCY EGNLSWQAALEVEPSAICVHADIYTGKKGVYERHGDDKLRGNFHQRMKEMLK    GPEPKDILDIGCSTGLSTLKLAETFP ARITGVDLSPHMLAVGRYFLRTREEQRHARGRVEYLHAAGEMTGMGDASMDLVSLSLTSHELPAEATR
Sbjct:    1 MSHPPSSSVVVVFALVFSCTASAFLQSGQSLLLSHGTYGGAPAMRRPFAHHXXXXXXXXXXXXXXXHGGCERXXXXXRSRMHANAFSEEDSYATLAGLEEKQGSSDLGLKVVSKAIDTLFAFEPFFDYMVVEAREKIVKRSYTLGVGWAENVDGMRRNMDELQGEYDRLLDAKVSTPSYYYAPFHCYPEGNLSWQAALEVEPSAICVHADIYTGKKGVYERHGDDKLRGNFHQRMKEMLK----GPEPKDILDIGCSTGLSTLKLAETFPLARITGVDLSPHMLAVGRYFLRTREEQRHARGRVEYLHAAGEMTGMGDASMDLVSLSLTSHELPAEATR 335          
BLAST of mRNA_Ecto-sp13_S_contig12497.2073.1 vs. uniprot
Match: A0A6H5KG82_9PHAE (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG82_9PHAE)

HSP 1 Score: 499 bits (1286), Expect = 9.540e-177
Identity = 247/259 (95.37%), Postives = 250/259 (96.53%), Query Frame = 1
Query:  241 MHTNAFSEEDSYATLAGLQEKEGSSGLGLNVVSKAIDTLFAFEPFFDYMVVEAREKIVKRSYTLGVGWAENVDGMRRNMDELQGEYDRLLDAKVSTPSYYYAPFHCYTEGNLSWQAALEVEPSAICVHADIYTGKKGVYERHGDDKLRGNFHQRMKEMLKVRPCGPEPKDILDIGCSTGLSTLKLAETFPSARITGVDLSPHMLAVGRYFLRTREEQRHARGRVEYLHAAGEMTGMGDASMDLVSLSLTSHELPAEATR 1017
            MH NAFSEEDSYATL GL+EKEGSSGLGL VVSKAIDTLFAFEPFFDYMV EAREKIVKRSYTLGVGWAENVDGMRRNMDELQGEYDRLLDAKVSTPSYYYAPFHCY EGNLSWQAALEVEPSAICVHADIYTGKKGVYERHGDDKLRGNFHQRMKEMLK    GPEPKDILDIGCSTGLSTLKLAETFPSARITGVDLSPHMLAVGRYFLRTREEQRHARGR+EYLHAAGEMTGMGDASMDLVSLSLTSHELPA+ATR
Sbjct:    1 MHANAFSEEDSYATLTGLEEKEGSSGLGLKVVSKAIDTLFAFEPFFDYMVEEAREKIVKRSYTLGVGWAENVDGMRRNMDELQGEYDRLLDAKVSTPSYYYAPFHCYPEGNLSWQAALEVEPSAICVHADIYTGKKGVYERHGDDKLRGNFHQRMKEMLK----GPEPKDILDIGCSTGLSTLKLAETFPSARITGVDLSPHMLAVGRYFLRTREEQRHARGRIEYLHAAGEMTGMGDASMDLVSLSLTSHELPADATR 255          
BLAST of mRNA_Ecto-sp13_S_contig12497.2073.1 vs. uniprot
Match: A0A0G4GZ14_VITBC (Methyltransf_11 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GZ14_VITBC)

HSP 1 Score: 221 bits (564), Expect = 3.990e-66
Identity = 113/234 (48.29%), Postives = 151/234 (64.53%), Query Frame = 1
Query:  322 GLNVVSKAIDTLFAFEPFFDYMVVEAREKIVKRSYTLGVGWAENVDGMRRNMDELQGEYDRLLDAKVST--PSYYYAPFHCYTEGNLSWQAALEVEPSAICVHADIYTGKKGVYERHGDDKLRGNFHQRMKEMLKVRPCGPEPKDILDIGCSTGLSTLKLAETFPSARITGVDLSPHMLAVGRYFLRTREEQRHARGRVEYLHAAGEMTGMGDASMDLVSLSLTSHELPAEATR 1017
            G+   +  ++ +F  +P   +    AR+ +VKR  ++G  W++ VD ++R  ++L  EY+RLLDA + +  PSYY  PFH Y EGNLSWQAA+E EP+A+ VH+ +Y          GD  LR  FHQ M  MLK R  G  P+ I+DIGCSTGLST+KL ETFP+A+ITGVDLSP+M AVG Y L+ R     A   +EY HAAGE TG+ D S+DLV++ L  HELP  A +
Sbjct:   52 GVLKATALLEGIFKVKPIMGFAAANARKMMVKRGESIGYSWSDEVDALKRAKEQLDAEYERLLDADLHSNYPSYYCVPFHAYDEGNLSWQAAMEAEPAAVTVHSPLYGDNPSDLRPDGDRMLRHRFHQEMVVMLKERG-GMTPERIVDIGCSTGLSTMKLHETFPTAKITGVDLSPYMCAVGAYKLQQRGSP-DALAHIEYRHAAGEATGLADGSVDLVTICLVHHELPTHAAK 283          
BLAST of mRNA_Ecto-sp13_S_contig12497.2073.1 vs. uniprot
Match: A0A0G4GWH0_9ALVE (Methyltransf_11 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GWH0_9ALVE)

HSP 1 Score: 217 bits (552), Expect = 3.010e-64
Identity = 110/261 (42.15%), Postives = 168/261 (64.37%), Query Frame = 1
Query:  241 MHTNAFSEEDSYATLAGLQEKEGSSGLGLNVVSKAIDTLFAFEPFFDYMVVEAREKIVKRSYTLGVGWAENVDGMRRNMDELQGEYDRLLDAKV--STPSYYYAPFHCYTEGNLSWQAALEVEPSAICVHADIYTGKKGVYERHGDDKLRGNFHQRMKEMLKVRPCGPEPKDILDIGCSTGLSTLKLAETFPSARITGVDLSPHMLAVGRYFLRTREEQRHARGRVEYLHAAGEMTGMGDASMDLVSLSLTSHELPAEATR 1017
            MH++  S E++ A    + EKE ++   +   S  +D +F ++P  ++M  +AR  I KR   +G  W+E VD +    D L+ E++ L   K   +TP YY  PFH Y+EGNL W AA+EV P+A  VHA+++T  +  +   GD+ LR  F + ++  ++VR    +P+ ++DIGCS+GLSTL+LA++FPS+++TGVDLSP+ LAV  + L+  E Q H + R+ YLHAA E TGM D+S+D+V++ L +HELPA A R
Sbjct:   33 MHSSPVSTEETAAP--SVTEKEETASFAVRWSSAILDRVFRYKPLLNFMSAKARGMIRKRGDKIGANWSEEVDSLLSLRDNLEAEFESLYSQKTDENTPEYYKVPFHAYSEGNLCWDAAVEVIPAAKTVHANLFTEDRNDFRLDGDETLRRRFMEELQSEMEVRRLR-DPQTVVDIGCSSGLSTLRLADSFPSSQVTGVDLSPYFLAVANHKLKDSENQDH-KNRIAYLHAAAEATGMADSSVDMVTICLVNHELPAAAAR 289          
BLAST of mRNA_Ecto-sp13_S_contig12497.2073.1 vs. uniprot
Match: A0A836C987_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C987_9STRA)

HSP 1 Score: 196 bits (498), Expect = 5.220e-56
Identity = 108/192 (56.25%), Postives = 129/192 (67.19%), Query Frame = 1
Query:  322 GLNVVSKAIDTLFAFEPFFDYMVVEAREKIVKRSYTLGVGWAENVDGMRRNMDELQGEYDRLLDAKVS--TPSYYYAPFHCYTEGNLSWQAALEVEPSAICVHADIYTGKKGVYERHGDDKLRGNFHQRMKEMLKVRPCGPEPKDILDIGCSTGLSTLKLAETFPSAR-ITGVDLSPHMLAVGRYFLRTREE 888
            G  + S A+D LF F PFF+     AR KIVKR+  LGV W   VD ++R       +YD L  A V+  TP+YY +PFH Y EGNL WQAALEVEPSAI VHA+IYT + G +ER GDDKLR  F  R  E+L+     P PKDI+D+GCSTGLSTL L+ TFP AR ITGVDLSPHML++ R  L TR +
Sbjct:   35 GFRIASAALDKLFKFPPFFETAKNSARTKIVKRAALLGVDWDARVDELQRI------QYDALYSADVAAATPAYYKSPFHAYAEGNLCWQAALEVEPSAISVHANIYT-ENGEFERDGDDKLRSTFLSRTLEILRDSGA-PAPKDIVDLGCSTGLSTLALSRTFPDARHITGVDLSPHMLSIARLQLATRPD 218          
BLAST of mRNA_Ecto-sp13_S_contig12497.2073.1 vs. uniprot
Match: I0ZAU4_COCSC (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0ZAU4_COCSC)

HSP 1 Score: 185 bits (470), Expect = 9.930e-53
Identity = 95/226 (42.04%), Postives = 138/226 (61.06%), Query Frame = 1
Query:  340 KAIDTLFAFEPFFDYMVVEAREKIVKRSYTLGVGWAENVDGMRRNMDELQGEYDRLLDAKVSTPSYYYAPFHCYTEGNLSWQAALEVEPSAICVHADIYTGKKGVYERHGDDKLRGNFHQRMKEMLKVRPCGPEPKDILDIGCSTGLSTLKLAETFPSARITGVDLSPHMLAVGRYFLRTREEQRHARGRVEYLHAAGEMTGMGDASMDLVSLSLTSHELPAEATR 1017
            +A++TLF F PFF++ V +AREKI +R   +GV +   V  +R   D  + E   + DA ++ P YY  PFH Y +GNL W+AAL+V  +A  VHA +   +  + +  GD +LRG++   M  +++        K+ +DIGC+TGLSTL+L   FP A+ T +DLSPH LAV R+  + RE +  A   V ++HAAGE TG+   ++DLVS  L  HELP  AT+
Sbjct:    4 RAVETLFKFPPFFNFAVSQAREKIAQRGREIGVDFEGEVAALRGGTD-WEWEMRGVRDADLAYPDYYTQPFHAYAQGNLCWEAALQVNAAAKSVHAPVMDPEGKLLDPEGDAQLRGSYTANMLRLMERAGASRRVKNAVDIGCATGLSTLELRSAFPDAQFTALDLSPHFLAVARHLQKQREAESGASEPVRFVHAAGEATGLPSETVDLVSCCLVMHELPRAATK 228          
BLAST of mRNA_Ecto-sp13_S_contig12497.2073.1 vs. uniprot
Match: D8RD13_SELML (Methyltransf_11 domain-containing protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RD13_SELML)

HSP 1 Score: 182 bits (461), Expect = 1.690e-51
Identity = 95/229 (41.48%), Postives = 139/229 (60.70%), Query Frame = 1
Query:  331 VVSKAIDTLFAFEPFFDYMVVEAREKIVKRSYTLGVGWAENVDGMRRNMDELQGEYDRLLDAKVSTPSYYYAPFHCYTEGNLSWQAALEVEPSAICVHADIYTGKKGVYERHGDDKLRGNFHQRMKEMLKVRPCGPEPKDILDIGCSTGLSTLKLAETFPSARITGVDLSPHMLAVGRYFLRTREEQRHARGRVEYLHAAGEMTGMGDASMDLVSLSLTSHELPAEATR 1017
            + S A++ LF+++PFF     +AR  IV+R   +G  W   +  +R N  + + E   + D  +  P YY  PFH Y  GNLSW AALEV+ +A  VHA+++  +    +  GD KLR ++HQ+M  ML+V      P D+LD+GC+TGLST  L + FP A++ GVD+SP+ ++V  Y LR   E   A   ++++H+AGE TG+ D S DLVS+ L  HELP  AT+
Sbjct:    3 LASAALNALFSYKPFFKLAAGKARGMIVERGEKIGYPWEPELARLREN--DWESELLAVRDVNLEYPEYYLKPFHAYDNGNLSWDAALEVDLAAKSVHANVFDPEATSLDPDGDVKLRDSYHQKMLPMLRV-----SPGDVLDVGCATGLSTFGLHKVFPQAQVVGVDMSPYFVSVANYKLR---EASKASLPLQFVHSAGEFTGLPDKSFDLVSICLVCHELPRNATK 221          
BLAST of mRNA_Ecto-sp13_S_contig12497.2073.1 vs. uniprot
Match: A0A1Z4SCJ1_9NOSO (Type 11 methyltransferase n=2 Tax=Nostocaceae TaxID=1162 RepID=A0A1Z4SCJ1_9NOSO)

HSP 1 Score: 181 bits (459), Expect = 3.360e-51
Identity = 98/230 (42.61%), Postives = 141/230 (61.30%), Query Frame = 1
Query:  328 NVVSKAIDTLFAFEPFFDYMVVEAREKIVKRSYTLGVGWAENVDGMRRNMDELQGEYDRLLDAKVSTPSYYYAPFHCYTEGNLSWQAALEVEPSAICVHADIYTGKKGVYERHGDDKLRGNFHQRMKEMLKVRPCGPEPKDILDIGCSTGLSTLKLAETFPSARITGVDLSPHMLAVGRYFLRTREEQRHARGRVEYLHAAGEMTGMGDASMDLVSLSLTSHELPAEATR 1017
            N+ ++ ++++ A +P  +    +AR+ ++KR+  +GV W + V  ++    + Q E  ++ + ++S P YY   FH Y  GNLSWQAA EVEP+A  VHA I+ G K      GD KLR ++H  +K  L       EP+DILD+GCS GLST  L E +P A+ITG+DLSP+ LAV  Y    R +QR A+  + ++HAA E TG+ DAS DLVS+ L  HELP   T+
Sbjct:   10 NLATRLVNSILAIKPLANLAKHQARQMMIKRAEDMGVPWTKEVQKLQAR--DWQTELAQVQNPELSYPDYYLTSFHAYETGNLSWQAAFEVEPAAYAVHAKIWQGAKA----QGDAKLRQSYHDILKRSLAY-----EPQDILDLGCSVGLSTFALQEVYPHAQITGLDLSPYFLAVANY----RAQQRQAK--INWVHAAAESTGLPDASFDLVSIFLVCHELPQLPTQ 222          
BLAST of mRNA_Ecto-sp13_S_contig12497.2073.1 vs. uniprot
Match: E1ZE69_CHLVA (Methyltransf_25 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZE69_CHLVA)

HSP 1 Score: 182 bits (461), Expect = 6.190e-51
Identity = 102/228 (44.74%), Postives = 135/228 (59.21%), Query Frame = 1
Query:  343 AIDTLFAFEPFFDYMVVEAREKIVKRSYTLGVGWAENVDGMRRNMDELQGEYDRLLDAKVSTPSYYYAPFHCYTEGNLSWQAALEVEPSAICVHADIYTGKKGVYERHGDDKLRGNFHQRMKEMLK---VRPCGPEPKDILDIGCSTGLSTLKLAETFPSARITGVDLSPHMLAVGRYFLRTREEQRHARG----RVEYLHAAGEMTGMGDASMDLVSLSLTSHELPA 1005
            A++ LF F PFF+     AR  IVKR   +G+ +   +D +R N+D  Q E   + DA V  P+YY  PFH Y EGNL W  A+E+  +A  VH+ +Y       +  GDD LR ++ + M+++L+    RP G     ILD+G +TGLSTL L   FP A +TG+DLSPHMLAVG Y  R R EQR A G    R+ ++H AGE T +   S DLVS+ L  HELPA
Sbjct:   44 AVEALFRFPPFFNMAAKHARAMIVKRGEKMGLDFEAEIDELR-NVDWDQ-ELQAVEDASVQYPAYYTVPFHAYPEGNLGWTPAMEMTVAARSVHSTVYDPTGKTLDPEGDDNLRSSYSRCMQQLLEEQGARPIG----QILDVGAATGLSTLALLRAFPDAEVTGIDLSPHMLAVGSYLQRQRNEQRAASGQPPERLHFVHGAGEDTRLPSESFDLVSVMLVCHELPA 265          
BLAST of mRNA_Ecto-sp13_S_contig12497.2073.1 vs. uniprot
Match: A0A8J9SU40_9CHLO (Probable demethylmenaquinone methyltransferase at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SU40_9CHLO)

HSP 1 Score: 181 bits (460), Expect = 1.920e-50
Identity = 99/260 (38.08%), Postives = 145/260 (55.77%), Query Frame = 1
Query:  238 RMHTNAFSEEDSYATLAGLQEKEGSSGLGLNVVSKAIDTLFAFEPFFDYMVVEAREKIVKRSYTLGVGWAENVDGMRRNMDELQGEYDRLLDAKVSTPSYYYAPFHCYTEGNLSWQAALEVEPSAICVHADIYTGKKGVYERHGDDKLRGNFHQRMKEMLKVRPCGPEPKDILDIGCSTGLSTLKLAETFPSARITGVDLSPHMLAVGRYFLRTREEQRHARGRVEYLHAAGEMTGMGDASMDLVSLSLTSHELPAEATR 1017
            R   +A + + S    A L   +G++ L    + KA++ LF F+PFF++ V +AREKI +R   +G+ +   V  + R  D    E   + D  +  P YY  PFH Y +GNL W+AAL+V  +A  VHA +   +        D +LR ++   M  +++   C    +D++D+GC+TGLSTL+L   FP AR T VDLSPH LAV R+  R RE +      + ++HAA E TG+   ++DLVS  L  HELP  ATR
Sbjct:   43 RKQRSASTLQCSAQPAASLPASQGNNEL----LFKAVEALFKFQPFFNFAVSQAREKIAERGRQIGLDFEGEVAALERETD-WSAELLAVQDPHLVFPDYYTQPFHAYRDGNLCWEAALQVNAAAKSVHAPVMDPEXXXXXXXXDAQLRSSYTANMLRLMERAGCSRPVQDVVDLGCATGLSTLELRSAFPEARFTAVDLSPHFLAVARHLQRRREAESGTSEPIRFVHAAAEETGLPSETVDLVSCCLVMHELPQAATR 297          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12497.2073.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNV1_ECTSI1.210e-20692.33Methyltransferase type 11 n=1 Tax=Ectocarpus silic... [more]
A0A6H5KG82_9PHAE9.540e-17795.37Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A0G4GZ14_VITBC3.990e-6648.29Methyltransf_11 domain-containing protein n=2 Tax=... [more]
A0A0G4GWH0_9ALVE3.010e-6442.15Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A836C987_9STRA5.220e-5656.25S-adenosyl-L-methionine-dependent methyltransferas... [more]
I0ZAU4_COCSC9.930e-5342.04S-adenosyl-L-methionine-dependent methyltransferas... [more]
D8RD13_SELML1.690e-5141.48Methyltransf_11 domain-containing protein n=3 Tax=... [more]
A0A1Z4SCJ1_9NOSO3.360e-5142.61Type 11 methyltransferase n=2 Tax=Nostocaceae TaxI... [more]
E1ZE69_CHLVA6.190e-5144.74Methyltransf_25 domain-containing protein n=1 Tax=... [more]
A0A8J9SU40_9CHLO1.920e-5038.08Probable demethylmenaquinone methyltransferase at ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12497contigEcto-sp13_S_contig12497:404..3973 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score585.9
Seed ortholog evalue1.2e-164
Seed eggNOG ortholog2880.D7FNV1
Model size1017
KEGG koko:K20069
Hectar predicted targeting categorychloroplast
Exons6
EggNOG free text desc.Methyltransferase domain
EggNOG OGs2CV5Z@1,2RRD0@2759
Cds size1017
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12497.2073.1prot_Ecto-sp13_S_contig12497.2073.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12497 404..3973 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462666.3018904-CDS-Ecto-sp13_S_contig12497:403..6881681462666.3018904-CDS-Ecto-sp13_S_contig12497:403..688Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12497 404..688 -
1681462666.3119347-CDS-Ecto-sp13_S_contig12497:1046..12591681462666.3119347-CDS-Ecto-sp13_S_contig12497:1046..1259Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12497 1047..1259 -
1681462666.320336-CDS-Ecto-sp13_S_contig12497:1626..18371681462666.320336-CDS-Ecto-sp13_S_contig12497:1626..1837Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12497 1627..1837 -
1681462666.3286617-CDS-Ecto-sp13_S_contig12497:2610..26851681462666.3286617-CDS-Ecto-sp13_S_contig12497:2610..2685Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12497 2611..2685 -
1681462666.3394077-CDS-Ecto-sp13_S_contig12497:3298..34431681462666.3394077-CDS-Ecto-sp13_S_contig12497:3298..3443Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12497 3299..3443 -
1681462666.347341-CDS-Ecto-sp13_S_contig12497:3885..39731681462666.347341-CDS-Ecto-sp13_S_contig12497:3885..3973Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12497 3886..3973 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12497.2073.1

>prot_Ecto-sp13_S_contig12497.2073.1 ID=prot_Ecto-sp13_S_contig12497.2073.1|Name=mRNA_Ecto-sp13_S_contig12497.2073.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=339bp
MSRPPSSSVVVVFALVFSCTASAFLQSGQSLLLSHGTFGGSPATRRPSAH
HRNADRRHEHHQQQRKRGGCERHERRRRSRMHTNAFSEEDSYATLAGLQE
KEGSSGLGLNVVSKAIDTLFAFEPFFDYMVVEAREKIVKRSYTLGVGWAE
NVDGMRRNMDELQGEYDRLLDAKVSTPSYYYAPFHCYTEGNLSWQAALEV
EPSAICVHADIYTGKKGVYERHGDDKLRGNFHQRMKEMLKVRPCGPEPKD
ILDIGCSTGLSTLKLAETFPSARITGVDLSPHMLAVGRYFLRTREEQRHA
RGRVEYLHAAGEMTGMGDASMDLVSLSLTSHELPAEATR
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mRNA from alignment at Ecto-sp13_S_contig12497:404..3973-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12497.2073.1 ID=mRNA_Ecto-sp13_S_contig12497.2073.1|Name=mRNA_Ecto-sp13_S_contig12497.2073.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3570bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12497:404..3973- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCTCGCCCGCCGTCGAGTTCCGTGGTAGTGGTGTTTGCACTTGTTTT CTCGTGCACAGCTTCCGCCTTTCTACAGTCTGGTCAATGTAAGATCGATC ATGAAGATGAAACATGTGTGTGCTTGTTCACGGGTACGCATACAGTCAGG CATGTACTGCTGTGTTGACATGTGCCCCGACAGAAATGATGCTGGTATAC CAACTGCTGTCTCTGAGCGTCACGTGCACGCACTGAGACCATCATCGTTC CATTGGTCGCCCCCAGAGGGTAGTGAGAAGCAAGGCCTGTGTGTTACTGG AATTGCTGACTTGTTGCTGTTGCTGTGAAGACAGGTGAACGGCAGCTTGG TCGTTTTCCGCATGCATGTCCAGCGGCAGCGGTCCCGGTGCCCGATCGCG GTGCCCGATCGCGGTGCCCGATCACCCCCGACACCAGTACAGAGACTGCC AGTGTGCCACCAAATCAGCCGAAGCAGCCGCCATTAACGAAGCTTTCCCT CCCGCGTTCACGTCCGCAACAACACACCAGCGCTGCTGCTGTCTCATGGC ACCTTCGGCGGATCCCCCGCCACGAGACGACCTTCCGCTCACCACCGTAA CGCGGATCGCCGGCACGAGCATCACCAGCAGCAGCGGAAACGTGGTGGCT GTGAGCGCCATGAACGGCGGAGGAGGTGCGACAGCGCGATGGTTGCTCTT TTTGGTTTTATTTTCCTGTGATCACACTCACCGGGCTTGGTTTTCCAGGG TTTTGGGATGTAGGCACCCCGGTGTCGGTAACACTTGCTCTCTGCCGGTG TTGCCCCTAGACCTAGATTACGAGATCATGTAGCTACAGTCAGTACAGTA GCCGGTAGGCTAAAGTGCACCGTAGGTAGACCCTAGCGTTGGGAGTCCGT CGTTTGGACTAGGAATAGGAAAGTGCTTGCTCACTTTGATCGAACGTGCA TCACAACGAACAGATAAGCTCCTTGCCCGCCCGCCTCTCCTCCCGTCTGT CCTACAAGTATGCGTACAGGCGGCAAGACGTCGGTCACAAACGGCAACAG TAGATATGATTGAACTAGCAGACAGCGTAATGGAACGGCATCGCAACATG GTGAAGAACGCCCCAGAGAGTCGTTAGTTTCCCTCTCAACGCCCACCCCC GTCCAGACGAAAAAACATAAACGACCCCGCGCGTGGCCATGGACCCAAAA GGCGAGACACAAAACCAAAAGGAGTACCTCCTCCCCCCCGTCCACAAAAC CTTCATTTCGCGGCCGACCCCGGAATACTCCCCAACAGGTCAAGAATGCA TACCAACGCCTTTTCCGAGGAAGACAGCTACGCTACGCTGGCGGGCCTGC AGGAGAAGGAGGGGTGAGTTGCCTCGGTTGGCGGGAGCGAGAAAAGAGCG CATTCTCTGCGGTGAATTACTTGTTTTGTACTCTGCGAGTATTCTTCGTC GGGTATGCTCGGACGTGCCCTTTTGAGGCTTGCGGTGGACACAGCTCTGT TGCTGATTGAGAAGAATTCGGGTATCGTTTCAATGCACGTCGGCTGCTGC TGCTGCTGCTGCTGCTCATGCTCATGCTGCCGCTCATGCTGACAATGACG ATGGCGATGGCGATGGCCATATTTTCTCTGCTGCGTTTTTTTTTTTGTGC TGCCCGTCTGCGGAATCGCTGACATGCGGTCGGTGGTTTGGTACTGTGTC ACGCCGATCGTGTAAAAAAAAATGTTGCTCATATTTTCTCGCACAGCAGT ATGCTCCTGCGGAGCAAGTCGATGGCATGAGTAGGGATCCGGCGGTACAG CGTCAAGACGGGGAAGAAACGTTCGTAGATCGGCGGGGACATGAAAAGGA GAGTGGGGGTAGACATGGTGCGTGACAGCAACGCGCAGCAACATGGAGGA CCCGTTTCCTTCTCACGATATCCAGGTTACCATCAAGCGTCAAGTACAGG GGCAATATACAACCAGGCAAGTCCATGCAAGCCCGAAATTGTCGTTTGTC CTACGCCCCCCCACCCCCCCCCCCCCCCTCCAAAATTTAGGCCACACTCT CCTCTTCCCTCGCCCTTCCCGCGTAACATTCCCACGAAACCCGCAATATG CCTCCAATCAACAATCAACAACGTACATGCGAGCAGTTCCTCCGGCCTGG GCCTGAATGTGGTTTCGAAAGCGATCGACACTCTCTTCGCCTTCGAGCCG TTCTTCGACTACATGGTAGTAGAGGCGCGCGAGAAGATAGTGAAGCGGTC GTACACTCTCGGGGTGGGGTGGGCGGAGAACGTGGACGGCATGAGGCGCA ACATGGACGAGCTCCAGGGCGAGTACGACCGGCTGCTGGACGCCAAGGTC AGGGAGAGGGAGGGCGAGAGACAGAGGGGGAGAGAGAGAGAGTGACTTTG TCAGTCCTAGGTAGTTGGGGTCGACGGGATGGATGTGCACTTGCCTTCCG TGAGGAAAAACGACAGGGGTCCATCGGTGCTCTCGTCTAGTATTAATACA TGGCCACGTCAAGACAATACGAGCATGATTTGCGGCATTGAAAAATAATC TTCCCTTCCCTCATCCTACTTGTCTCGACCATGAGCAACACCGACTCGCA AAGCTCTCTTGTGATACCAAGCAGGAGACTACCGTGCCGGGTAGTGACCC CCGCCCCCCCCCCCCCCCCCCGCGCGTGGGTGCGCTGCGCGTCACGCCTT CCCCGCCCTCCCAGGTGTCAACTCCCTCCTACTACTACGCGCCGTTCCAC TGCTACACGGAGGGAAACCTCTCGTGGCAGGCCGCGCTCGAAGTCGAGCC CTCCGCCATCTGTGTCCACGCCGACATTTACACCGGGAAGAAGGGGGTGT ACGAGCGCCACGGGGACGACAAGCTGCGGGGGAACTTTCACCAGAGGATG AAGGAGATGCTCAAGGTGCGACCGTGCGTCGAGGGCTAGGTAGTCTAGGG TATTCGGGCTAAATAGGAATTTTTAGAAAATGTTGATACACAGAGAGAGA GACTACTGGAGCCGTTCGGTTGGGATTTGGGGCTGGGGGTTGCGATGATG ATGGGGTGTGGTGGGAAGGGGAAACGGGTTTGTTGTAGAAACGCAAGGCG CGAGGGGGGAAGGGGGTCGGTGCTTTTCCCCTTGGTCCCTTGTATCGACC ACGATTACGTATAGACGATGCTCGGTTGAGTCGAAACGGAACCCAAAGAT ACAGTTGATGGACCTTCAACATGTTTTTTCTGCCTTGTTGATTGTTTCTT CTGTTGCTGCTCGCTGCCGCGTCACGACTCCTCAGGGTCCCGAGCCCAAG GACATCCTCGACATCGGGTGTTCGACGGGACTGTCGACCCTGAAGCTGGC GGAGACCTTCCCGTCAGCGAGGATCACCGGGGTGGACCTGTCGCCGCACA TGCTTGCCGTGGGGCGTTACTTCCTCCGGACGAGGGAGGAGCAGCGCCAC GCGAGGGGCAGGGTCGAGTACCTGCACGCCGCCGGGGAGATGACGGGGAT GGGGGACGCGTCCATGGACCTCGTCTCGTTGTCGCTGACGAGCCACGAGC TGCCGGCGGAGGCCACTAGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12497:404..3973-

>mRNA_Ecto-sp13_S_contig12497.2073.1 ID=mRNA_Ecto-sp13_S_contig12497.2073.1|Name=mRNA_Ecto-sp13_S_contig12497.2073.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1017bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12497:404..3973- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCTCGCCCGCCGTCGAGTTCCGTGGTAGTGGTGTTTGCACTTGTTTT
CTCGTGCACAGCTTCCGCCTTTCTACAGTCTGGTCAATCGCTGCTGCTGT
CTCATGGCACCTTCGGCGGATCCCCCGCCACGAGACGACCTTCCGCTCAC
CACCGTAACGCGGATCGCCGGCACGAGCATCACCAGCAGCAGCGGAAACG
TGGTGGCTGTGAGCGCCATGAACGGCGGAGGAGGTCAAGAATGCATACCA
ACGCCTTTTCCGAGGAAGACAGCTACGCTACGCTGGCGGGCCTGCAGGAG
AAGGAGGGTTCCTCCGGCCTGGGCCTGAATGTGGTTTCGAAAGCGATCGA
CACTCTCTTCGCCTTCGAGCCGTTCTTCGACTACATGGTAGTAGAGGCGC
GCGAGAAGATAGTGAAGCGGTCGTACACTCTCGGGGTGGGGTGGGCGGAG
AACGTGGACGGCATGAGGCGCAACATGGACGAGCTCCAGGGCGAGTACGA
CCGGCTGCTGGACGCCAAGGTGTCAACTCCCTCCTACTACTACGCGCCGT
TCCACTGCTACACGGAGGGAAACCTCTCGTGGCAGGCCGCGCTCGAAGTC
GAGCCCTCCGCCATCTGTGTCCACGCCGACATTTACACCGGGAAGAAGGG
GGTGTACGAGCGCCACGGGGACGACAAGCTGCGGGGGAACTTTCACCAGA
GGATGAAGGAGATGCTCAAGGTGCGACCGTGCGGTCCCGAGCCCAAGGAC
ATCCTCGACATCGGGTGTTCGACGGGACTGTCGACCCTGAAGCTGGCGGA
GACCTTCCCGTCAGCGAGGATCACCGGGGTGGACCTGTCGCCGCACATGC
TTGCCGTGGGGCGTTACTTCCTCCGGACGAGGGAGGAGCAGCGCCACGCG
AGGGGCAGGGTCGAGTACCTGCACGCCGCCGGGGAGATGACGGGGATGGG
GGACGCGTCCATGGACCTCGTCTCGTTGTCGCTGACGAGCCACGAGCTGC
CGGCGGAGGCCACTAGG
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