mRNA_Ecto-sp13_S_contig916.20729.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig916.20729.1 vs. uniprot
Match: A0A6H5L0W7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0W7_9PHAE) HSP 1 Score: 404 bits (1038), Expect = 1.890e-133 Identity = 215/243 (88.48%), Postives = 219/243 (90.12%), Query Frame = 1
Query: 1 SLCIEKNQPHCHYPLKPLPKRAATKSAPARRLSSTSXXXXXXXISSGDASKAKRLAEAPEVASYGTGGVLATVNNRSMPTVPGRLSLKSRCRLSASPATGFVGMQENGFLGDFFGCLGILPLTTESTVRNAMVEVMMRQCGGQAYSGTGGSGMEGLAEDEEKGSSGGGALARRHTLPDHPAKCMMWCAIALGALMRGVPVERVMGYVQLARESLAECFDGRSVEHARAYLIMSFLHSIIHDEA 729
SLCIEKNQPHCHYPLKPLPKRAA K ARRL XXX ISSGDASKAKRLAEA EVASYG G VLATV+ RSMPTV GR+SLK RCRLSASPATG VGMQENGFLG FFGCLGILPLTTESTVRNAMVEVMMRQCGGQAYS TGGSGMEGLAEDEEKG GGGALARRHTLPDHPAKCMMWCAIALGALMRGVPVERV GYVQLARESLA+CFDGRSVEHARAYLIMSFLHSIIHD+A
Sbjct: 76 SLCIEKNQPHCHYPLKPLPKRAAAKPTAARRLXXXXXXXSDCSISSGDASKAKRLAEAHEVASYGAGSVLATVDTRSMPTVRGRMSLK-RCRLSASPATGLVGMQENGFLGAFFGCLGILPLTTESTVRNAMVEVMMRQCGGQAYSRTGGSGMEGLAEDEEKGWCGGGALARRHTLPDHPAKCMMWCAIALGALMRGVPVERVTGYVQLARESLADCFDGRSVEHARAYLIMSFLHSIIHDKA 317
BLAST of mRNA_Ecto-sp13_S_contig916.20729.1 vs. uniprot
Match: D7FTE0_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE0_ECTSI) HSP 1 Score: 389 bits (1000), Expect = 7.660e-128 Identity = 205/242 (84.71%), Postives = 212/242 (87.60%), Query Frame = 1
Query: 1 SLCIEKNQPHCHYPLKPLPKRAATKSAPARRLSSTSXXXXXXXISSGDASKAKRLAEAPEVASYGTGGVLATVNNRSMPTVPGRLSLKSRCRLSASPATGFVGMQENGFLGDFFGCLGILPLTTESTVRNAMVEVMMRQCGGQAYSGTGGSGMEGLAEDEEKGSSGGGALARRHTLPDHPAKCMMWCAIALGALMRGVPVERVMGYVQLARESLAECFDGRSVEHARAYLIMSFLHSIIHDE 726
SLCIEK QP+CHYPLKPLPKRAA K A ARRLSS+S ISSGDASKAKRLAEA E ASY TGGVLATVN RSMPTV GR+SLK RCRLS+SPATG VGM ENGFL DFFGC GILPLTTESTVRNAMVEVMMRQCGGQAYSGTGGSGMEGLAEDEEK GGGALARRHTLPDHPAKCMMWCAIALGALMRG+ VE VMGYVQLA +SL ECFDGRSVEHARAYLIMSFLH +I DE
Sbjct: 76 SLCIEKKQPYCHYPLKPLPKRAAAKPAAARRLSSSSPSSSDCSISSGDASKAKRLAEAQEGASYDTGGVLATVNTRSMPTVRGRMSLK-RCRLSSSPATGLVGMPENGFLCDFFGCFGILPLTTESTVRNAMVEVMMRQCGGQAYSGTGGSGMEGLAEDEEKDWHGGGALARRHTLPDHPAKCMMWCAIALGALMRGISVEHVMGYVQLAWKSLTECFDGRSVEHARAYLIMSFLHRVIGDE 316
BLAST of mRNA_Ecto-sp13_S_contig916.20729.1 vs. uniprot
Match: A0A6H5L0K0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K0_9PHAE) HSP 1 Score: 384 bits (987), Expect = 1.480e-125 Identity = 204/235 (86.81%), Postives = 209/235 (88.94%), Query Frame = 1
Query: 4 LCIEKNQPHCHYPLKPLPKRAATKSAPARRLSSTSXXXXXXXISSGDASKAKRLAEAPEVASYGTGGVLATVNNRSMPTVPGRLSLKSRCRLSASPATGFVGMQENGFLGDFFGCLGILPLTTESTVRNAMVEVMMRQCGGQAYSGTGGSGMEGLAEDEEKGSSGGGALARRHTLPDHPAKCMMWCAIALGALMRGVPVERVMGYVQLARESLAECFDGRSVEHARAYLIMSFLH 708
LCIEKNQPHCHYPLKPL KRAA K A XXX ISSGDASKAKRLAEAPEVASYGTGGVLATV+ RSMPTV GR+SLK RCRLS+SPATG VGM ENGFL DFFGCLGILPLTTESTVRNAMVEVMMRQCGGQ YSGTGGSGMEGLAEDEEKG GGGALARRHTLPDHPAKCMMWCAIALGALMRGVPVERV GYVQLARESLA+CFDGRSVEHARAYLI+SFLH
Sbjct: 78 LCIEKNQPHCHYPLKPLLKRAAAKPTAAXXXXXXXXXXSDCSISSGDASKAKRLAEAPEVASYGTGGVLATVDTRSMPTVRGRMSLK-RCRLSSSPATGLVGMPENGFLCDFFGCLGILPLTTESTVRNAMVEVMMRQCGGQVYSGTGGSGMEGLAEDEEKGWRGGGALARRHTLPDHPAKCMMWCAIALGALMRGVPVERVTGYVQLARESLADCFDGRSVEHARAYLIVSFLH 311
BLAST of mRNA_Ecto-sp13_S_contig916.20729.1 vs. uniprot
Match: D7FTD5_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD5_ECTSI) HSP 1 Score: 214 bits (546), Expect = 6.840e-66 Identity = 137/233 (58.80%), Postives = 153/233 (65.67%), Query Frame = 1
Query: 1 SLCIEKNQPHCHYPLKPLPKRAATKSAPARRLSSTSXXXXXXXISSGDASKAKRLAEAPEVASYGTGGVLATVNNR-SMPTVPGRLSLKSRCRLSASPATGFVGMQENGFLGDFFGCLGILPLTTESTVRNAMVEVMM-----RQCGGQAYSGTGGSGMEGLAEDEEKGSSGGGALARRHTLPDHPAKCMMWCAIALGALMRGVPVERVMGYVQLARESLAECFDGRSVEHAR 681
S CIEK +P+C Y LK K A + P+ LSST S G + A R A P VAS+G VLAT + SMPTVP S+K RCRL ASPATG VGM+E+GFL DFFGC GILPLTTESTVRNAMVE+MM R+ + + G E E EEKG SG + RR T PDH A CMMWCAIALGALMRGVPVE V YV LARESLAECFDGRS+EHAR
Sbjct: 61 SYCIEKKRPYCFYRLKSATKPGA-EGPPS--LSST------FSASWGGVNTAMRPANPPRVASHGGVEVLATAADIWSMPTVPEYPSIK-RCRLRASPATGLVGMKESGFLCDFFGCFGILPLTTESTVRNAMVEIMMGAELPRKRYNEEHLGVRTRWAEDEGEGEEKGCSGDRTVVRRGTQPDHAAMCMMWCAIALGALMRGVPVEHVEMYVNLARESLAECFDGRSIEHAR 283
BLAST of mRNA_Ecto-sp13_S_contig916.20729.1 vs. uniprot
Match: D7FTD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD9_ECTSI) HSP 1 Score: 198 bits (503), Expect = 2.880e-56 Identity = 95/98 (96.94%), Postives = 97/98 (98.98%), Query Frame = 1
Query: 310 MQENGFLGDFFGCLGILPLTTESTVRNAMVEVMMRQCGGQAYSGTGGSGMEGLAEDEEKGSSGGGALARRHTLPDHPAKCMMWCAIALGALMRGVPVE 603
MQENGFLGDFFGCLG+LPLTTESTVRNAMVEVMMRQCGGQAYSGTGGSGMEGLAEDEEKG SGGGALARRHTLPDHPAKCMMWCAIALGALMRG+PVE
Sbjct: 1 MQENGFLGDFFGCLGVLPLTTESTVRNAMVEVMMRQCGGQAYSGTGGSGMEGLAEDEEKGWSGGGALARRHTLPDHPAKCMMWCAIALGALMRGIPVE 98
BLAST of mRNA_Ecto-sp13_S_contig916.20729.1 vs. uniprot
Match: D8LCV1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV1_ECTSI) HSP 1 Score: 125 bits (313), Expect = 2.220e-30 Identity = 71/160 (44.38%), Postives = 96/160 (60.00%), Query Frame = 1
Query: 268 RCRLSASPATGFVGMQENGFLGDFFGCLGILPLTTESTVRNAMVEVMMRQCGGQAYSGTGGSGMEGLAEDEEKGS------SGGGALAR---RHTLPDHPAKCMMWCAIALGALMRGVPVERVMGYVQLARESLAECFDGRS-VEHARAYLIMSFLHSII 717
RCRLSASPATG VGMQEN FL DFFGC+G LPLTT S +R MV +M+ + Q +D ++G + GG L++ R+ P P+ C WCA+ALGAL +G P+E V Y QLA+E+LA+ G E A+A++I++ LH +
Sbjct: 10 RCRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTPSHIRETMVTIMLPRASSQ---------QSVFGDDCDEGGHYFEAVAPGGDLSKTSARNQFPMDPSACTFWCAVALGALAKGSPIESVTSYAQLAQEALAKSNSGPGDAEVAKAWVILANLHGFM 160
BLAST of mRNA_Ecto-sp13_S_contig916.20729.1 vs. uniprot
Match: D8LCV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV4_ECTSI) HSP 1 Score: 124 bits (310), Expect = 2.470e-30 Identity = 71/156 (45.51%), Postives = 95/156 (60.90%), Query Frame = 1
Query: 268 RCRLSASPATGFVGMQENGFLGDFFGCLGILPLTTESTVRNAMVEVMMRQCGGQAYSGTGGSGMEGLAEDEEKGSSGG--GALARRHTLPDHPAKCMMWCAIALGALMRGVPVERVMGYVQLARESLAECFDGRS-VEHARAYLIMSFLHSIIHDE 726
RCRLSASPATG V MQEN FL DFFGC+G LPLTT S +R MV++M+ Q G G + E + GG ++ LP P+ C WCA+ALGAL++G P+E V Y QLA+E+LA+ G E A+A++I++ LH + D+
Sbjct: 6 RCRLSASPATGLVEMQENTFLSDFFGCIGFLPLTTPSQIRETMVKIMVPPASSQQS--VFGDGSDKRGHYFEAVAPGGDLSKISAGSQLPMDPSACTFWCAVALGALVKGSPIESVTSYAQLAQEALAKSNSGPGDAEVAKAWVILANLHGFMGDK 159
BLAST of mRNA_Ecto-sp13_S_contig916.20729.1 vs. uniprot
Match: D8LU13_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU13_ECTSI) HSP 1 Score: 124 bits (311), Expect = 1.900e-29 Identity = 76/159 (47.80%), Postives = 97/159 (61.01%), Query Frame = 1
Query: 250 RLSLKSRCRLSASPATGFVGMQENGFLGDFFGCLGILPLTTESTVRNAMVEVMMRQCGGQAYSGTGGSGMEGLAEDEEKGSSGGGALARRHTLPDHPAKCMMWCAIALGALMRGVPVERVMGYVQLARESLAECFDGRS-VEHARAYLIMSFLHSIIHD 723
RL LK R RLSASPA G VGMQE+ FL DFFGC+G LPLTT ST+R AMV++M Q + GG E L + +G A + H P +P C WCAIALGAL +G P E V Y QLA E+LA+ G + E A+A+ ++++LH + D
Sbjct: 100 RLPLK-RLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVQIMATPATLQRPAVGGGCDEEALFDAIARGEDLINA-SEGHQHPMNPRSCTFWCAIALGALAKGSPFESVAKYSQLAHEALAKSKSGPADAEVAKAWAMLAYLHGFMGD 256
BLAST of mRNA_Ecto-sp13_S_contig916.20729.1 vs. uniprot
Match: A0A6H5K678_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K678_9PHAE) HSP 1 Score: 122 bits (306), Expect = 3.730e-28 Identity = 91/263 (34.60%), Postives = 124/263 (47.15%), Query Frame = 1
Query: 1 SLCIEKNQPHCHYPLKPLPKRAATKSAPARRLSSTSXXXXXXXISSGDASKAKRLAEAPEVASYGTGGVLATVNNRSMPTVPGRLSLK---SRCRLSASPATGFVGMQENGFLGDFFGCLGILPLTTESTVRNAMVEVM-----MRQCGG----QAYSGTGGSGMEGLAEDEEKGSSG---------GGALARRHTLPDHPAKCMMWCAIALGALMRGVPVERVMGYVQLARESLAECFDGRSVEHARAYLIMSFLHSIIHDE 726
S CIEK +P CHY ++ LP ++ T + + ++ S + AE A+ T G T + T G L R RLSASPATG G+ EN LGDFFGCLG L L TES +R AMV VM + Q G + + EE S LP + C++WCAIALGAL+RG P+ V YV LA+++LA C +++ ARA L M+F+H+ + D+
Sbjct: 123 SFCIEKGRPECHYSMRSLPSKSKTPTV----VPTSGEEDAVRDDSPSPGLSLRARAEVDNDANADT-GAQHTAKKKGSGTAVGVTGLVLPFKRARLSASPATGLAGLLENELLGDFFGCLGFLSLATESIIRGAMVSVMRANNVLIQQGATTPARPXXXXXXXXXXXXXDTEETPVSSVRTEEACWRNAVTTEDAALPRDASTCILWCAIALGALVRGYPLPHVQRYVHLAKDTLASCSASAALDMARANLAMAFVHNFLGDQ 380
BLAST of mRNA_Ecto-sp13_S_contig916.20729.1 vs. uniprot
Match: D7FTD4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD4_ECTSI) HSP 1 Score: 116 bits (291), Expect = 3.690e-26 Identity = 64/154 (41.56%), Postives = 94/154 (61.04%), Query Frame = 1
Query: 268 RCRLSASPATGFVGMQENGFLGDFFGCLGILPLTTESTVRNAMVEVMM-RQCGGQAYSGTGGSGMEGLAEDEEKGSSGGGALARRHTLPDHPAKCMMWCAIALGALMRGVPVERVMGYVQLARESLAECFDGRSVEHARAYLIMSFLHSIIHDE 726
R RLSASPATG VGM+EN L FF CLG PLT ES VR A++EV++ G + + T +G G +E + D + C +WCA+A+GAL++G P ER Y+ LAR S++ CFD +V+ ARA+++M++L++ + +E
Sbjct: 8 RARLSASPATGLVGMKENELLNSFFSCLGFFPLTHESLVRGAIMEVVLVPPVGAEDVAPTRPAGAWGKSEPRQG--------------TDAASTCTLWCAVAIGALVQGQPTERATDYLHLARRSVSHCFDMVTVKTARAFMMMAYLYNFLRNE 147 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig916.20729.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig916.20729.1 >prot_Ecto-sp13_S_contig916.20729.1 ID=prot_Ecto-sp13_S_contig916.20729.1|Name=mRNA_Ecto-sp13_S_contig916.20729.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=243bp SLCIEKNQPHCHYPLKPLPKRAATKSAPARRLSSTSSSSSDSSISSGDASback to top mRNA from alignment at Ecto-sp13_S_contig916:72..3750+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig916.20729.1 ID=mRNA_Ecto-sp13_S_contig916.20729.1|Name=mRNA_Ecto-sp13_S_contig916.20729.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3679bp|location=Sequence derived from alignment at Ecto-sp13_S_contig916:72..3750+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig916:72..3750+ >mRNA_Ecto-sp13_S_contig916.20729.1 ID=mRNA_Ecto-sp13_S_contig916.20729.1|Name=mRNA_Ecto-sp13_S_contig916.20729.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=729bp|location=Sequence derived from alignment at Ecto-sp13_S_contig916:72..3750+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |