prot_Ecto-sp13_S_contig9156.20726.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9156.20726.1
Unique Nameprot_Ecto-sp13_S_contig9156.20726.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length200
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9156.20726.1 vs. uniprot
Match: D7G4B2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4B2_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 2.360e-11
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0 
Query:   32 SGVTPLHRAAEVNSCQVAQVLINADASVNVRTS 64
            SGVTPLHRAAEVNSCQVAQVLINADASVNVRTS
Sbjct:    9 SGVTPLHRAAEVNSCQVAQVLINADASVNVRTS 41
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BLAST of mRNA_Ecto-sp13_S_contig9156.20726.1 vs. uniprot
Match: UPI0006234918 (ankyrin repeat domain-containing protein 39 n=1 Tax=Linepithema humile TaxID=83485 RepID=UPI0006234918)

HSP 1 Score: 53.9 bits (128), Expect = 2.220e-5
Identity = 27/60 (45.00%), Postives = 35/60 (58.33%), Query Frame = 0 
Query:    4 IWQAARANNVPRVKALLERGVSPDATRWSGVTPLHRAAEVNSCQVAQVLINADASVNVRT 63
            IW AA   +V R+K LL +G+SPDAT  +G  PLH AA      V ++L+   A VN  T
Sbjct:   37 IWGAAMDGDVERIKLLLSKGISPDATDSAGYKPLHYAARNGHYLVCEILLQHGADVNATT 96
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9156.20726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4B2_ECTSI2.360e-11100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI00062349182.220e-545.00ankyrin repeat domain-containing protein 39 n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 184..199
NoneNo IPR availablePANTHERPTHR24193ANKYRIN REPEAT PROTEINcoord: 7..170
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 32..61
e-value: 0.018
score: 24.2
coord: 66..95
e-value: 5.5
score: 16.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 66..98
score: 9.644
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 32..64
score: 11.568
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 6..93
e-value: 1.4E-10
score: 41.6
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 7..111
score: 24.559
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..116
e-value: 6.7E-28
score: 99.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 4..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9156contigEcto-sp13_S_contig9156:3294..5542 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9156.20726.1mRNA_Ecto-sp13_S_contig9156.20726.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9156 3267..5640 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9156.20726.1 ID=prot_Ecto-sp13_S_contig9156.20726.1|Name=mRNA_Ecto-sp13_S_contig9156.20726.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=200bp
MGDIWQAARANNVPRVKALLERGVSPDATRWSGVTPLHRAAEVNSCQVAQ
VLINADASVNVRTSWGWYAPLHFALNSGHEQVAEVLLRAGARWTILTKRL
QTPYDLAVARGLKIQALKIQDISRKISEERRILHKSAPTDASTSRGRRAT
EATAARRKQAKEHQVNMQRLQVTPEGKDGEWHGKSEAERSNKQEQENHN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf