prot_Ecto-sp13_S_contig12496.2072.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12496.2072.1
Unique Nameprot_Ecto-sp13_S_contig12496.2072.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length173
Homology
BLAST of mRNA_Ecto-sp13_S_contig12496.2072.1 vs. uniprot
Match: D7G6L3_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6L3_ECTSI)

HSP 1 Score: 364 bits (935), Expect = 8.840e-128
Identity = 169/172 (98.26%), Postives = 170/172 (98.84%), Query Frame = 0
Query:    1 SSVQDTALRAKRVSLQDCLQKFSVPETLCEDNSWYCSRCKELRQAVKTIQVWSLPEVLILHFKRFSHAGSNRGKVELFVDFPINGLDMSPYCRGETLEGGRPMSALYDLFAVSNHMGGMGHGHYTAFVRDWEGSGMSQDWHVCDDHDCRPVPEARVRTAHAYVLFYRRRPLG 172
            S+VQDTALRAKRVSLQDCLQKFSVPETLCEDNSWYCSRCKELRQAVKTIQVWSLPEVLILHFKRFSHAG NRGKVELFVDFPINGLDMSPYCRGETLEGGRPMSALYDLFAVSNHMGGMGHGHYTAFVRDWEGSGMSQDWHVCDDHDCRPVPEARVRTAHAYVLFYRRRPL 
Sbjct:    4 STVQDTALRAKRVSLQDCLQKFSVPETLCEDNSWYCSRCKELRQAVKTIQVWSLPEVLILHFKRFSHAGPNRGKVELFVDFPINGLDMSPYCRGETLEGGRPMSALYDLFAVSNHMGGMGHGHYTAFVRDWEGSGMSQDWHVCDDHDCRPVPEARVRTAHAYVLFYRRRPLA 175          
BLAST of mRNA_Ecto-sp13_S_contig12496.2072.1 vs. uniprot
Match: A0A6H5L229_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L229_9PHAE)

HSP 1 Score: 364 bits (934), Expect = 7.200e-114
Identity = 169/172 (98.26%), Postives = 170/172 (98.84%), Query Frame = 0
Query:    1 SSVQDTALRAKRVSLQDCLQKFSVPETLCEDNSWYCSRCKELRQAVKTIQVWSLPEVLILHFKRFSHAGSNRGKVELFVDFPINGLDMSPYCRGETLEGGRPMSALYDLFAVSNHMGGMGHGHYTAFVRDWEGSGMSQDWHVCDDHDCRPVPEARVRTAHAYVLFYRRRPLG 172
            SSVQDTALRAKRVSLQDCLQKFSVPETLC+DNSWYCSRCKELRQAVKTIQVWSLPEVLILHFKRFSHAG NRGKVELFVDFPINGLDMSPYCRGETLEGGRPMSALYDLFAVSNHMGGMGHGHYTAFVRDWEGSGMSQDWHVCDDHDCRPVPEARVRTAHAYVLFYRRRPL 
Sbjct: 1522 SSVQDTALRAKRVSLQDCLQKFSVPETLCKDNSWYCSRCKELRQAVKTIQVWSLPEVLILHFKRFSHAGPNRGKVELFVDFPINGLDMSPYCRGETLEGGRPMSALYDLFAVSNHMGGMGHGHYTAFVRDWEGSGMSQDWHVCDDHDCRPVPEARVRTAHAYVLFYRRRPLA 1693          
BLAST of mRNA_Ecto-sp13_S_contig12496.2072.1 vs. uniprot
Match: G5A3V8_PHYSP (USP domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A3V8_PHYSP)

HSP 1 Score: 160 bits (406), Expect = 3.930e-46
Identity = 80/162 (49.38%), Postives = 106/162 (65.43%), Query Frame = 0
Query:   13 VSLQDCLQKFSVPETLCEDNSWYCSRCKELRQAVKTIQVWSLPEVLILHFKRFSHAGSN-RGKVELFVDFPINGLDMSPYCRGETLEGGRPMSALYDLFAVSNHMGGMGHGHYTAFVRDW-EGSG-MSQDWHVCDDHDCRPVPEARVRTAHAYVLFYRRRPL 171
            +SL DC + F  PETL + N WYCS CKE RQA KT+++W LP+VL+L  KRF +     R K++++VDFP+ GLDMSPYC  ++ E        YDLFAVSNH G MG GHYTAF + W +G G M   W+  DD    P   ++V++  AY+LFY+R+ L
Sbjct:   88 ISLDDCFRNFVKPETLDQSNLWYCSTCKEHRQARKTMEMWRLPDVLVLSLKRFEYRNEILRDKLDVYVDFPLEGLDMSPYCLEKSSEKDH---LSYDLFAVSNHYGSMGFGHYTAFAKSWKDGDGEMFPGWYSFDDSLVTPAMPSQVKSNAAYILFYKRKNL 246          
BLAST of mRNA_Ecto-sp13_S_contig12496.2072.1 vs. uniprot
Match: D0RMA9_PHYIT (Ubiquitin-specific protease, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0RMA9_PHYIT)

HSP 1 Score: 158 bits (400), Expect = 2.740e-45
Identity = 80/162 (49.38%), Postives = 104/162 (64.20%), Query Frame = 0
Query:   13 VSLQDCLQKFSVPETLCEDNSWYCSRCKELRQAVKTIQVWSLPEVLILHFKRFSHAGSN-RGKVELFVDFPINGLDMSPYCRGETLEGGRPMSAL-YDLFAVSNHMGGMGHGHYTAFVRDWEGSG-MSQDWHVCDDHDCRPVPEARVRTAHAYVLFYRRRPL 171
            +SL DC + F  PETL + N WYCS+C E RQA KT+++W LP+VL+L  KRF +     R K++++VDFP+ GLDMSPYC    LE       L YDLFAVSNH G MG GHYTAF + W+  G M   W+  DD    P    +V++  AY+LFY+R+ L
Sbjct:   88 ISLDDCFRNFVKPETLDQANLWYCSKCNEHRQARKTMEMWRLPDVLVLSLKRFEYRNEILRDKLDVYVDFPLEGLDMSPYC----LEKSDDKDHLSYDLFAVSNHYGSMGFGHYTAFAKSWKDEGEMYPGWYSFDDSLVAPAMPNQVKSNAAYILFYKRKNL 245          
BLAST of mRNA_Ecto-sp13_S_contig12496.2072.1 vs. uniprot
Match: A0A662XHX6_9STRA (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XHX6_9STRA)

HSP 1 Score: 166 bits (421), Expect = 1.350e-44
Identity = 81/163 (49.69%), Postives = 108/163 (66.26%), Query Frame = 0
Query:   13 VSLQDCLQKFSVPETLCEDNSWYCSRCKELRQAVKTIQVWSLPEVLILHFKRFSHAGSN-RGKVELFVDFPINGLDMSPYCRGETLEGGRPMSALYDLFAVSNHMGGMGHGHYTAFVRDWE-GSG-MSQDWHVCDDHDCRPVPEARVRTAHAYVLFYRRRPLG 172
            +SL DC + F  PETL + N WYC++CKE RQA KT+++W LP+VL+L  KRF +     R K+++FVDFP+ GLDM+PYC  +  + G      YDLFAVSNH G MG GHYTAF + W+ G G M   W+  DD    PV  ++V+T  AY+LFY+R+ L 
Sbjct:  728 ISLDDCFRNFVKPETLDQANLWYCAKCKEHRQARKTMEMWRLPDVLVLSLKRFEYRNEILRDKLDMFVDFPLTGLDMAPYCLEQERDEGHQS---YDLFAVSNHYGSMGFGHYTAFAKSWQDGEGEMYPGWYSFDDSHVTPVMPSQVKTNAAYILFYKRKNLS 887          
BLAST of mRNA_Ecto-sp13_S_contig12496.2072.1 vs. uniprot
Match: A0A7S2S141_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S141_9STRA)

HSP 1 Score: 154 bits (389), Expect = 4.160e-44
Identity = 78/177 (44.07%), Postives = 104/177 (58.76%), Query Frame = 0
Query:    7 ALRAKRVSLQDCLQKFSVPETLCEDNSWYCSRCKELRQAVKTIQVWSLPEVLILHFKRFSHAGS-NRGKVELFVDFPINGLDMSPYCRGETLEGGR------PMSALYDLFAVSNHMGGMGHGHYTAFVRDWEGSGMSQDWHVCDDHDCRPVPEA-------RVRTAHAYVLFYRRR 169
            +L    + L  C + F+ PE L E N WYCS CK   +A+KT+++W LP +LI+H KRF    +  R K++ FVDFPI GLDMS +C     E          + ++YDLFAV+NH G MG GHYTAF R W  +GM  DW   DD + + V +        ++ T+ AYVLFYRRR
Sbjct:   40 SLSTSSICLDKCFENFTAPERLDEHNKWYCSNCKGHVRAMKTMELWKLPNILIVHLKRFEFKHALRREKLDTFVDFPIEGLDMSKHCASAFSERSDNDFVVDDVPSIYDLFAVTNHYGRMGFGHYTAFARRWNENGMESDWANFDDSNVQSVGDGHGHVNGVKMATSAAYVLFYRRR 216          
BLAST of mRNA_Ecto-sp13_S_contig12496.2072.1 vs. uniprot
Match: A0A8K1CPI0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPI0_PYTOL)

HSP 1 Score: 164 bits (416), Expect = 6.390e-44
Identity = 78/160 (48.75%), Postives = 103/160 (64.38%), Query Frame = 0
Query:   13 VSLQDCLQKFSVPETLCEDNSWYCSRCKELRQAVKTIQVWSLPEVLILHFKRFSHAGSN-RGKVELFVDFPINGLDMSPYCRGETLEGGRPMSALYDLFAVSNHMGGMGHGHYTAFVRDWEGSGMSQDWHVCDDHDCRPVPEARVRTAHAYVLFYRRRPL 171
            +SL DC + F+ PETL + N WYCS+CKE RQA KT+++W LP+VLI+  KRF +     R K++ FVDFP+  LDM+ +C  +T +   P    YDLFAVSNH G MG GHYTAF R W+ S     W+  DD    P    +V++  AY+LFY+RR L
Sbjct:  727 ISLYDCFRNFTKPETLDQANLWYCSKCKEHRQARKTMEIWKLPDVLIVSLKRFEYRNEILRDKLDAFVDFPLEDLDMTSFCLEKTED---PERLRYDLFAVSNHYGSMGFGHYTAFARSWQNSDKYPGWYSFDDSQVSPAMPGQVKSNAAYILFYKRRQL 883          
BLAST of mRNA_Ecto-sp13_S_contig12496.2072.1 vs. uniprot
Match: K3WVW9_GLOUD (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVW9_GLOUD)

HSP 1 Score: 162 bits (411), Expect = 3.180e-43
Identity = 80/163 (49.08%), Postives = 107/163 (65.64%), Query Frame = 0
Query:   13 VSLQDCLQKFSVPETLCEDNSWYCSRCKELRQAVKTIQVWSLPEVLILHFKRFSHAGSN-RGKVELFVDFPINGLDMSPYCRGETLEGGRPMSALYDLFAVSNHMGGMGHGHYTAFVRDWE-GSGMSQD-WHVCDDHDCRPVPEARVRTAHAYVLFYRRRPLG 172
            +SL DC + F+  ETL + N WYCS+CKE RQA KT+++W LP+VLIL  KRF +     R K+++FVDFP+  LDM+ YC  +T   G     +YDLFAVSNH GGMG GHYTAF + W+ G+G     W+  DD    P    +V++  AY+LFY+RR +G
Sbjct:  747 ISLDDCFRNFTKTETLDQANLWYCSKCKEHRQARKTMEIWKLPDVLILSLKRFEYRNEILRDKLDVFVDFPMENLDMTKYCLEKTHTDGH---LIYDLFAVSNHYGGMGFGHYTAFAKSWQNGNGERYPGWYSFDDSHVTPAMAGQVKSNAAYILFYKRRNIG 906          
BLAST of mRNA_Ecto-sp13_S_contig12496.2072.1 vs. uniprot
Match: A0A2P6THT3_CHLSO (Ubiquitin carboxyl-terminal hydrolase 4 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6THT3_CHLSO)

HSP 1 Score: 162 bits (411), Expect = 3.560e-43
Identity = 84/171 (49.12%), Postives = 105/171 (61.40%), Query Frame = 0
Query:   11 KRVSLQDCLQKFSVPETLCEDNSWYCSRCKELRQAVKTIQVWSLPEVLILHFKRFSHAGSNRGKVELFVDFPINGLDMSPYCRGETLEGGRPMSAL-------YDLFAVSNHMGGMGHGHYTAFVR-----DWEGSGMSQDWHVCDDHDCRPVPEARVRTAHAYVLFYRRR 169
            K V L DCL+ F  PE L  D+ WYCS+CK+  QA K + +WSLP+VL++H KRFS++  +R K++  VDFP+ GLDM PY   ++  GG    AL       YD FAVSNH GGMG GHYTA+ R       EG G    W+  DD     +  + VRTA AYVLFYRRR
Sbjct:  881 KSVGLADCLETFLQPEQLDADDCWYCSKCKQHVQADKKLDLWSLPDVLVIHLKRFSYSRYSRDKLDTLVDFPLTGLDMGPYLLPQSGNGGTTSGALGGGGAPIYDCFAVSNHYGGMGGGHYTAYARVPGTAAAEGEGDLGHWYTFDDSHVGKMEASGVRTAAAYVLFYRRR 1051          
BLAST of mRNA_Ecto-sp13_S_contig12496.2072.1 vs. uniprot
Match: A0A5D6XTB0_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTB0_9STRA)

HSP 1 Score: 162 bits (410), Expect = 3.960e-43
Identity = 79/163 (48.47%), Postives = 104/163 (63.80%), Query Frame = 0
Query:   13 VSLQDCLQKFSVPETLCEDNSWYCSRCKELRQAVKTIQVWSLPEVLILHFKRFSHAGSN-RGKVELFVDFPINGLDMSPYCRGETLEGGRPMSALYDLFAVSNHMGGMGHGHYTAFVRDWEGSGMSQ--DWHVCDDHDCRPVPEARVRTAHAYVLFYRRRPLG 172
            VSL DC + F+  ETL + N WYCSRCKE RQA KT+++W LP+VLIL  KRF +     R K+++FVDFP+ GLDM+P+C     +   P    YDLFAVSNH G MG GHYTAF + W+     +   W+  DD    P   ++V++  AY+LFY+RR L 
Sbjct:  677 VSLDDCFRNFTKTETLDQANLWYCSRCKEHRQARKTMEIWKLPDVLILSLKRFEYRNEVLRDKLDVFVDFPLEGLDMTPHCLETRAD---PDHLTYDLFAVSNHYGSMGFGHYTAFAKSWQSGNGERFPGWYSFDDSHVSPAMPSQVKSNAAYILFYKRRTLA 836          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12496.2072.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6L3_ECTSI8.840e-12898.26USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L229_9PHAE7.200e-11498.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
G5A3V8_PHYSP3.930e-4649.38USP domain-containing protein n=1 Tax=Phytophthora... [more]
D0RMA9_PHYIT2.740e-4549.38Ubiquitin-specific protease, putative n=1 Tax=Phyt... [more]
A0A662XHX6_9STRA1.350e-4449.69Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Noth... [more]
A0A7S2S141_9STRA4.160e-4444.07Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A8K1CPI0_PYTOL6.390e-4448.75Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WVW9_GLOUD3.180e-4349.08Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Glob... [more]
A0A2P6THT3_CHLSO3.560e-4349.12Ubiquitin carboxyl-terminal hydrolase 4 n=1 Tax=Ch... [more]
A0A5D6XTB0_9STRA3.960e-4348.47Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pyth... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 48..166
e-value: 7.2E-26
score: 91.2
NoneNo IPR availableGENE3D3.90.70.10coord: 1..171
e-value: 9.2E-57
score: 194.7
NoneNo IPR availablePANTHERPTHR21646:SF24FI20021P1coord: 10..169
NoneNo IPR availablePANTHERPTHR21646FAMILY NOT NAMEDcoord: 10..169
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00973USP_2coord: 107..124
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1..169
score: 31.935
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 12..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12496contigEcto-sp13_S_contig12496:404..3204 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12496.2072.1mRNA_Ecto-sp13_S_contig12496.2072.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12496 404..3204 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12496.2072.1 ID=prot_Ecto-sp13_S_contig12496.2072.1|Name=mRNA_Ecto-sp13_S_contig12496.2072.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=173bp
SSVQDTALRAKRVSLQDCLQKFSVPETLCEDNSWYCSRCKELRQAVKTIQ
VWSLPEVLILHFKRFSHAGSNRGKVELFVDFPINGLDMSPYCRGETLEGG
RPMSALYDLFAVSNHMGGMGHGHYTAFVRDWEGSGMSQDWHVCDDHDCRP
VPEARVRTAHAYVLFYRRRPLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf