prot_Ecto-sp13_S_contig9154.20724.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9154.20724.1
Unique Nameprot_Ecto-sp13_S_contig9154.20724.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length659
Homology
BLAST of mRNA_Ecto-sp13_S_contig9154.20724.1 vs. uniprot
Match: A0A6H5KA60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA60_9PHAE)

HSP 1 Score: 643 bits (1659), Expect = 4.710e-222
Identity = 461/686 (67.20%), Postives = 481/686 (70.12%), Query Frame = 0
Query:    1 QACLEDYLFQRITVGHHSLHPCPKF-----GEESCRSSATRNDVRRIVRAEVYEEHRIRLEGLSGACEEXXXXXXXXXXXXXXHVSSPPSPLLSSLSRRASGAAADSHEEDADAGAKEDNTCQSCGSTRXXXXXXXXXXXXXXXXXXXXXXXXXXXX---GRTPGGGAGRKGRKRFAWSPRWSPHRR-PPSLDGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEKRATGAGAGGEE--TEGAASAAGTYAAGLRHLTCPTCGAHRCQRPRGGGVKVPIDPNDEAMTKATMPISTDAAASETATVRRRRGSRMTDNLVPCLGCGEAWCLLCGDPVSTAKIAADVVSSGGVGGGS--------YRRTRTDPKEGRGRDGQGEKERGIWYAMPTGGVVPCGHVRHFNRWNVAGCPGARFTGPK-----------GWDGEFITLYRALVAILVFLVGPLFFLLRGVCLLVETLLAPLCCGAFGGASRSVPGIICFPLAVTLSAVLMAAWLPLGLVAAATRWLWTAAAFGRPQADEDGDSTFGGGQLDSDVPALKQPENFPASRKKRQTTKGAKACRTLAFAPAVMLSSYLASWWREGGDGGRGRGGGSHDDGGVDDINNSYSDDGRSEKQWQNEDLPDGGCEKARELLVVAAEEGAGKGELETPPLSVSPA 656
            +ACLEDYLFQRI VGHHSLHPCPK      G  S  S     D  R V+   ++      +GLSGACEE   XXXXXXXXXXX        LLSSLS+RAS AAADSHEED DAGAKEDNTCQSCGSTRXXXXXXXXXXXXXXXXXXX            GR PGGG GR GRK FAWSP WSPHRR  PSLDGT     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                TEGAASAAGT AAGLRH TCP CGA RCQR RG GVKVP+DPNDEAM                      RGS MTDNLVPCLGCGEAWCLLCGDPVSTA+IAADVVSSGGV G          YRRTRTDPKEGRGRDGQGE ERG  YA+ TGGVVP GHVRHF+RWNVAGCPGAR+T PK           GW+GEFITLYRALV +LVFLVGPLFFLLRGVCLLVETLLA LCC AFGGASR                                            +ADEDGDS  GGGQ DSDVPAL+QPE  P S KKRQ T+GAKACR LAFAPAVMLSSYLASW REGGDGGRGRG GS DDGG D++NNS  DD RS  QW+NEDLPDG  E+ARELLVVAAEEGAGKGELETPPLSVSPA
Sbjct:   40 KACLEDYLFQRIMVGHHSLHPCPKVDSADQGTTSFASDVICGDPGRSVK---HQRPDTLQQGLSGACEECGHXXXXXXXXXXXXXXXXXXXLLSSLSQRASAAAADSHEEDTDAGAKEDNTCQSCGSTRXXXXXXXXXXXXXXXXXXXSVPRDAAAAMAAGRAPGGGDGRTGRKGFAWSPMWSPHRRGTPSLDGTATGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEGAASAAGTPAAGLRHRTCPACGARRCQRTRGSGVKVPVDPNDEAMATXXXXXXXXXXXXXXXXXXXXRGSNMTDNLVPCLGCGEAWCLLCGDPVSTAEIAADVVSSGGVDGDGGVGGIGCGYRRTRTDPKEGRGRDGQGESERGTGYAVSTGGVVPRGHVRHFSRWNVAGCPGARYTDPKVGEVVSCVTARGWEGEFITLYRALVVVLVFLVGPLFFLLRGVCLLVETLLASLCCSAFGGASRF-------------------------------------------KADEDGDSGGGGGQFDSDVPALRQPEKIPTSMKKRQATEGAKACRILAFAPAVMLSSYLASWLREGGDGGRGRGVGSQDDGGTDNVNNSCPDDKRSIMQWKNEDLPDGISEQARELLVVAAEEGAGKGELETPPLSVSPA 679          
BLAST of mRNA_Ecto-sp13_S_contig9154.20724.1 vs. uniprot
Match: D7FWK9_ECTSI (IBR domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK9_ECTSI)

HSP 1 Score: 567 bits (1461), Expect = 1.710e-193
Identity = 382/488 (78.28%), Postives = 394/488 (80.74%), Query Frame = 0
Query:    1 QACLEDYLFQRITVGHHSLHPCPKFGEESCRSSATRNDVRRIVRAEVYEEHRIRLEGLSGACEEXXXXXXXXXXXXXXHVSSPPSPLLSSLSRRASGAAADSHEEDADAGAKEDNTCQSCGSTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXG--RT-PGGGAGRKGRKRFAWSPRWSPHRRPPSLDGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEKRATGAG--AGGEETEGAASAAGTYAAGLRHLTCPTCGAHRCQRPRGGGVKVPIDPNDEAMTKATMPISTDAAASETATVRRRRGSRMTDNLVPCLGCGEAWCLLCGDPVSTAKIAADVVSSGGVGGGS-----YRRTRTDPKEGRGRDGQGEKERGIWYAMPTGGVVPCGHVRHFNRWNVAGCPGARFTGPKGWDGEFITLYRALVAILVFLVGPLFFLLRGVCLLVETLLAPLCCGAFGGASRSVPGII 478
            +ACLEDYLFQRI VGHHSLHPCPKFGEESCRSSATRNDVRRIVRAEVYEEHR RLEGLSGAC  XXXXXXXXXXXXXX        LLS++SRRAS A ADSHEEDA AGA EDNTCQSCGST XXXXXXXXXXXX                G  RT PGGGAGRKGRK FAWSPRWSPH R PSLD T     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     DEK ATGAG  AG +E EGAASAAGT+AAGLRH TCPTCGAHR Q PRG  VK P+DPNDE MT ATMP ST AAASETAT RRRRGS MTDNLV CLGCGEAWCLLCG PVSTA+ AAD VSSGG          YRRTRTDPKEGRG DGQGE+ERG  YA+ TGGVVP GHVRHF+RWNVAGCPGAR+T P GW GEFITLYRALVAILVFLVGPLFF LRGVCLLVETLLAPLCCGAFGGASR    +I
Sbjct:   85 KACLEDYLFQRIMVGHHSLHPCPKFGEESCRSSATRNDVRRIVRAEVYEEHRRRLEGLSGACXXXXXXXXXXXXXXXXXXXXXXXXLLSAISRRASAAXADSHEEDAGAGANEDNTCQSCGSTXXXXXXXXXXXXXSHRQKRHPVPRDAATAGAARTAPGGGAGRKGRKGFAWSPRWSPHGRAPSLDRTATGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPPEVDEKSATGAGVGAGDKEAEGAASAAGTHAAGLRHRTCPTCGAHRRQSPRGSRVKAPVDPNDEEMTTATMPTSTPAAASETATARRRRGSDMTDNLVLCLGCGEAWCLLCGGPVSTAETAADGVSSGGXXXXXXXXXXYRRTRTDPKEGRGCDGQGERERGTGYAVSTGGVVPRGHVRHFSRWNVAGCPGARYTDPMGWKGEFITLYRALVAILVFLVGPLFFFLRGVCLLVETLLAPLCCGAFGGASRPTKMVI 572          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9154.20724.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KA60_9PHAE4.710e-22267.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWK9_ECTSI1.710e-19378.28IBR domain protein n=1 Tax=Ectocarpus siliculosus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..428
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 482..508
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 429..448
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 509..658
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 471..481
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 453..470
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 449..452
NoneNo IPR availableTMHMMTMhelixcoord: 433..455
NoneNo IPR availableTMHMMTMhelixcoord: 476..498

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9154contigEcto-sp13_S_contig9154:297..3534 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9154.20724.1mRNA_Ecto-sp13_S_contig9154.20724.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9154 297..3534 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9154.20724.1 ID=prot_Ecto-sp13_S_contig9154.20724.1|Name=mRNA_Ecto-sp13_S_contig9154.20724.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=659bp
QACLEDYLFQRITVGHHSLHPCPKFGEESCRSSATRNDVRRIVRAEVYEE
HRIRLEGLSGACEECGHRGRRPSSPSSPHVSSPPSPLLSSLSRRASGAAA
DSHEEDADAGAKEDNTCQSCGSTRRRHHHHHHQNHRQKRHSVPRDAAAAG
AAGRTPGGGAGRKGRKRFAWSPRWSPHRRPPSLDGTTTGGDDESGQLRNK
RPDKRQQQEQHQKRRGPSPEAAAASAANPPEIDEKRATGAGAGGEETEGA
ASAAGTYAAGLRHLTCPTCGAHRCQRPRGGGVKVPIDPNDEAMTKATMPI
STDAAASETATVRRRRGSRMTDNLVPCLGCGEAWCLLCGDPVSTAKIAAD
VVSSGGVGGGSYRRTRTDPKEGRGRDGQGEKERGIWYAMPTGGVVPCGHV
RHFNRWNVAGCPGARFTGPKGWDGEFITLYRALVAILVFLVGPLFFLLRG
VCLLVETLLAPLCCGAFGGASRSVPGIICFPLAVTLSAVLMAAWLPLGLV
AAATRWLWTAAAFGRPQADEDGDSTFGGGQLDSDVPALKQPENFPASRKK
RQTTKGAKACRTLAFAPAVMLSSYLASWWREGGDGGRGRGGGSHDDGGVD
DINNSYSDDGRSEKQWQNEDLPDGGCEKARELLVVAAEEGAGKGELETPP
LSVSPARP*
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