mRNA_Ecto-sp13_S_contig9149.20718.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9149.20718.1
Unique NamemRNA_Ecto-sp13_S_contig9149.20718.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9149.20718.1 vs. uniprot
Match: D8LT74_ECTSI (Branched-chain-amino-acid aminotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT74_ECTSI)

HSP 1 Score: 413 bits (1061), Expect = 5.380e-142
Identity = 199/204 (97.55%), Postives = 201/204 (98.53%), Query Frame = 2 
Query:  161 MGPFNSQTVADGGGVETGTAEVTCSIRPVCPALSVLQTSMLSVQRTTTPREKQDKSKLVFGQTFSDHMLHLDWDSNGGWQAPRILPYGDLCISPAASSLHYGLQCYEGMKAYRDADGGVRLFRPDLNMIRLNRSMDRLCFPQVDEASMIELISKLVVEDADWIPEGDGYSLYIRPTAISTHPYLGLAAPEKVKIYVVLSPVGPY 772
            MGPFNSQTVADGGGVETGTA+VTCSIRPVCPAL VLQTSMLSV+RTTTPREKQDKSKLVFGQTFSDHMLHLDWDS GGWQAPRILPYGDL ISPAASSLHYGLQCYEGMKAYRDADGGVRLFRPDLNMIRLNRSMDRLCFPQVDEASMIELISKLVVEDADWIPEGDGYSLYIRPTAISTHPYLGLAAPEKVKIYVVLSPVGPY
Sbjct:    1 MGPFNSQTVADGGGVETGTADVTCSIRPVCPALPVLQTSMLSVERTTTPREKQDKSKLVFGQTFSDHMLHLDWDSEGGWQAPRILPYGDLRISPAASSLHYGLQCYEGMKAYRDADGGVRLFRPDLNMIRLNRSMDRLCFPQVDEASMIELISKLVVEDADWIPEGDGYSLYIRPTAISTHPYLGLAAPEKVKIYVVLSPVGPY 204
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BLAST of mRNA_Ecto-sp13_S_contig9149.20718.1 vs. uniprot
Match: D8LT77_ECTSI (Branched-chain-amino-acid aminotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT77_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 1.560e-94
Identity = 135/169 (79.88%), Postives = 155/169 (91.72%), Query Frame = 2 
Query:  266 LQTSMLSVQRTTTPREKQDKSKLVFGQTFSDHMLHLDWDSNGGWQAPRILPYGDLCISPAASSLHYGLQCYEGMKAYRDADGGVRLFRPDLNMIRLNRSMDRLCFPQVDEASMIELISKLVVEDADWIPEGDGYSLYIRPTAISTHPYLGLAAPEKVKIYVVLSPVGPY 772
            ++ S+L+V+RTTTPREKQDKS LVFGQTFSDHMLHLDWD+  GWQAPRILPYGDL ISPAASSLHYGLQC+EGMKAYRDA+G VRLFRP+LN+ RLNRSM+RL FP+VDE  MIELISKLV+EDADWIPEGDGYSLY+RPTA+STHPYLG+ A   +K++V+LSPVGPY
Sbjct:   86 IEPSLLTVERTTTPREKQDKSTLVFGQTFSDHMLHLDWDNEEGWQAPRILPYGDLRISPAASSLHYGLQCFEGMKAYRDAEGRVRLFRPELNIRRLNRSMERLRFPKVDEDGMIELISKLVLEDADWIPEGDGYSLYLRPTAVSTHPYLGITAAANLKLFVILSPVGPY 254
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BLAST of mRNA_Ecto-sp13_S_contig9149.20718.1 vs. uniprot
Match: A0A024UVJ6_9STRA (Branched-chain-amino-acid aminotransferase n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UVJ6_9STRA)

HSP 1 Score: 232 bits (592), Expect = 3.190e-71
Identity = 105/173 (60.69%), Postives = 126/173 (72.83%), Query Frame = 2 
Query:  254 ALSVLQTSMLSVQRTTTPREKQDKSKLVFGQTFSDHMLHLDWDSNGGWQAPRILPYGDLCISPAASSLHYGLQCYEGMKAYRDADGGVRLFRPDLNMIRLNRSMDRLCFPQVDEASMIELISKLVVEDADWIPEGDGYSLYIRPTAISTHPYLGLAAPEKVKIYVVLSPVGPY 772
            AL+ L  S   + +T  P+ K  K KL FG TFSDH+L +DWD N GW AP I PYG L I PAASSLHY LQC+EGMKAY D+ G +RLFRPDLNM R+N SM+RL  P  D   +IE + KL++ D  WIPEGDGYSLYIRPT +STHP++G+ A  K K+YV+LSPVGPY
Sbjct:   24 ALAGLDASKTIIHQTPHPKAKTPKEKLTFGTTFSDHLLEIDWDKNSGWGAPLIRPYGPLAIDPAASSLHYALQCFEGMKAYIDSKGKIRLFRPDLNMKRMNNSMERLFLPTFDSDELIECLKKLILLDKSWIPEGDGYSLYIRPTGVSTHPFIGVGASSKAKVYVILSPVGPY 196
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BLAST of mRNA_Ecto-sp13_S_contig9149.20718.1 vs. uniprot
Match: A0A1W0A544_9STRA (Branched-chain-amino-acid aminotransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A544_9STRA)

HSP 1 Score: 226 bits (576), Expect = 7.600e-69
Identity = 102/173 (58.96%), Postives = 130/173 (75.14%), Query Frame = 2 
Query:  254 ALSVLQTSMLSVQRTTTPREKQDKSKLVFGQTFSDHMLHLDWDSNGGWQAPRILPYGDLCISPAASSLHYGLQCYEGMKAYRDADGGVRLFRPDLNMIRLNRSMDRLCFPQVDEASMIELISKLVVEDADWIPEGDGYSLYIRPTAISTHPYLGLAAPEKVKIYVVLSPVGPY 772
            AL+ + ++   + +TT P+ K +K KL FG TFSDHML +DWD+  GW  P I PYG L I PA+SSLHY LQC+EGMKAY + DG +RLFRPD+NM R+N SM+RL  P  D   MIE I +LV+ D DWIP+GDGYSLY+RPT ISTHP++G++A  K K++V+LSPVGPY
Sbjct:   22 ALAGVDSTKTIIHQTTHPKAKLEKEKLKFGTTFSDHMLEIDWDAEKGWGKPLIRPYGPLNIDPASSSLHYALQCFEGMKAYINDDGKIRLFRPDMNMARMNSSMERLFLPTFDSKEMIECIKQLVLLDKDWIPKGDGYSLYLRPTGISTHPHIGVSASSKAKVFVILSPVGPY 194
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BLAST of mRNA_Ecto-sp13_S_contig9149.20718.1 vs. uniprot
Match: A0A836CGN0_9STRA (Branched-chain-amino-acid aminotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGN0_9STRA)

HSP 1 Score: 224 bits (570), Expect = 1.540e-67
Identity = 105/181 (58.01%), Postives = 132/181 (72.93%), Query Frame = 2 
Query:  230 CSIRPVCPALSVLQTSMLSVQRTTTPREKQDKSKLVFGQTFSDHMLHLDWDSNGGWQAPRILPYGDLCISPAASSLHYGLQCYEGMKAYRDADGGVRLFRPDLNMIRLNRSMDRLCFPQVDEASMIELISKLVVEDADWIPEGDGYSLYIRPTAISTHPYLGLAAPEKVKIYVVLSPVGPY 772
            C++    P  + +  S L V +T+ P E   K KLVFG+TF+DHML +DWDS  GW+AP I P+GDL +SPAAS LHY L+C+EGMKAY+DA G VRLFRP LNM R N S+ R+  P VD  + + L+ +L++ D  WIPEGDGYSLYIRPTAIST  YLG+ APE+VK+Y + SPVGPY
Sbjct:   45 CAVSVSSP--NAIDASALKVTKTSKPMELVPKDKLVFGRTFADHMLEVDWDSKKGWRAPVIRPFGDLSVSPAASVLHYALECFEGMKAYKDASGCVRLFRPALNMARFNHSLARMYMPAVDGPTFLSLLRELLLLDEHWIPEGDGYSLYIRPTAISTTRYLGVGAPEEVKLYCITSPVGPY 223
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BLAST of mRNA_Ecto-sp13_S_contig9149.20718.1 vs. uniprot
Match: A0A2D4BR72_PYTIN (Branched-chain-amino-acid aminotransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR72_PYTIN)

HSP 1 Score: 223 bits (567), Expect = 2.000e-67
Identity = 100/169 (59.17%), Postives = 124/169 (73.37%), Query Frame = 2 
Query:  266 LQTSMLSVQRTTTPREKQDKSKLVFGQTFSDHMLHLDWDSNGGWQAPRILPYGDLCISPAASSLHYGLQCYEGMKAYRDADGGVRLFRPDLNMIRLNRSMDRLCFPQVDEASMIELISKLVVEDADWIPEGDGYSLYIRPTAISTHPYLGLAAPEKVKIYVVLSPVGPY 772
            ++ S + VQ T  P+ K  K KL FG TFSDHML +DW+   GW  P I PYG L + PA++ LHY L+C+EGMKAY+DA+G VRLFRPD+NM RLN SM RL  PQ DE  + E + +L+  D DW+PEGDGYSLYIRPT ISTHPY+G+ A  K KI+++LSPVGPY
Sbjct:   32 IKASNIEVQLTKQPKVKLPKEKLTFGTTFSDHMLEVDWEKGHGWGKPLIRPYGPLSMDPASACLHYALECFEGMKAYKDAEGRVRLFRPDMNMKRLNSSMKRLLLPQFDEDELTECLKELLRVDRDWVPEGDGYSLYIRPTGISTHPYIGVGASLKAKIFIILSPVGPY 200
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BLAST of mRNA_Ecto-sp13_S_contig9149.20718.1 vs. uniprot
Match: A0A6G0W7D6_9STRA (Branched-chain-amino-acid aminotransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W7D6_9STRA)

HSP 1 Score: 221 bits (563), Expect = 7.150e-67
Identity = 100/173 (57.80%), Postives = 129/173 (74.57%), Query Frame = 2 
Query:  254 ALSVLQTSMLSVQRTTTPREKQDKSKLVFGQTFSDHMLHLDWDSNGGWQAPRILPYGDLCISPAASSLHYGLQCYEGMKAYRDADGGVRLFRPDLNMIRLNRSMDRLCFPQVDEASMIELISKLVVEDADWIPEGDGYSLYIRPTAISTHPYLGLAAPEKVKIYVVLSPVGPY 772
            AL+ +Q+S   + +TT P+ K  K +L FG TF+DHML +DWD+  GW AP I PYG L + PAAS+LHY LQC+EGMKAY D +G +RLFRPDLNM R+N SM+RL  P  +   +I  + KL++ D +WIP+G+GYSLYIRPT ISTHP +G+AA  K KI+V+LSPVGPY
Sbjct:   24 ALADIQSSKTIINKTTAPKAKIPKEQLKFGATFTDHMLEVDWDNKNGWAAPVIRPYGPLALDPAASALHYALQCFEGMKAYIDDNGKIRLFRPDLNMKRMNNSMERLHLPTFNSEELIAAMKKLILLDQEWIPKGEGYSLYIRPTGISTHPNIGVAASTKAKIFVILSPVGPY 196
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BLAST of mRNA_Ecto-sp13_S_contig9149.20718.1 vs. uniprot
Match: A0A5D6XGY9_9STRA (Branched-chain-amino-acid aminotransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XGY9_9STRA)

HSP 1 Score: 219 bits (559), Expect = 1.430e-66
Identity = 96/169 (56.80%), Postives = 123/169 (72.78%), Query Frame = 2 
Query:  266 LQTSMLSVQRTTTPREKQDKSKLVFGQTFSDHMLHLDWDSNGGWQAPRILPYGDLCISPAASSLHYGLQCYEGMKAYRDADGGVRLFRPDLNMIRLNRSMDRLCFPQVDEASMIELISKLVVEDADWIPEGDGYSLYIRPTAISTHPYLGLAAPEKVKIYVVLSPVGPY 772
            L  + L VQRTT P+ K  K  L FG TF+DHML +DW+   GWQAP I PYG + + PA+S+LHY L+C+EGMKAY    G +RLFRPD+NM RLN SM RL  PQ DE  + + + +L+  D DW+P+GDGYSLYIRPT ISTHP++G+ A  K KI++++SPVGPY
Sbjct:   30 LNAATLEVQRTTAPKAKAPKETLTFGTTFTDHMLEVDWEQGDGWQAPLIRPYGPIAMDPASSALHYALECFEGMKAYVGPTGEIRLFRPDMNMKRLNSSMKRLLLPQFDEEQLTKCLKELLKIDRDWVPQGDGYSLYIRPTGISTHPFIGVGASLKAKIFIIMSPVGPY 198
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BLAST of mRNA_Ecto-sp13_S_contig9149.20718.1 vs. uniprot
Match: A0A067CV10_SAPPC (Branched-chain-amino-acid aminotransferase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CV10_SAPPC)

HSP 1 Score: 219 bits (559), Expect = 2.690e-66
Identity = 98/173 (56.65%), Postives = 125/173 (72.25%), Query Frame = 2 
Query:  254 ALSVLQTSMLSVQRTTTPREKQDKSKLVFGQTFSDHMLHLDWDSNGGWQAPRILPYGDLCISPAASSLHYGLQCYEGMKAYRDADGGVRLFRPDLNMIRLNRSMDRLCFPQVDEASMIELISKLVVEDADWIPEGDGYSLYIRPTAISTHPYLGLAAPEKVKIYVVLSPVGPY 772
            AL+ L +S   + +T  P+ K  K  L FG TF+DHML +DWD   GW  P I PYG L + PA+SSLHY LQC+EGMKAY + DG +RLFRPD+NM R+N SM+RL  P  D   +I+ I +LV+ D DWIP+GDGYSLY+RPT ISTHP++G+ A  K K++V+LSPVGPY
Sbjct:   22 ALAGLDSSKTIIHKTMHPKAKVPKETLTFGTTFTDHMLEIDWDQTTGWGKPLIRPYGPLSVDPASSSLHYALQCFEGMKAYINDDGKIRLFRPDMNMARMNNSMERLFLPTFDSEELIKCIEQLVLLDKDWIPKGDGYSLYLRPTGISTHPHIGVGASTKAKVFVILSPVGPY 194
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BLAST of mRNA_Ecto-sp13_S_contig9149.20718.1 vs. uniprot
Match: A0A485KSJ3_9STRA (Branched-chain-amino-acid aminotransferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KSJ3_9STRA)

HSP 1 Score: 219 bits (559), Expect = 2.840e-66
Identity = 95/173 (54.91%), Postives = 126/173 (72.83%), Query Frame = 2 
Query:  254 ALSVLQTSMLSVQRTTTPREKQDKSKLVFGQTFSDHMLHLDWDSNGGWQAPRILPYGDLCISPAASSLHYGLQCYEGMKAYRDADGGVRLFRPDLNMIRLNRSMDRLCFPQVDEASMIELISKLVVEDADWIPEGDGYSLYIRPTAISTHPYLGLAAPEKVKIYVVLSPVGPY 772
            A++ + ++   + +T+ P+ K  K KL FG TFSDH+L +DWD   GW  P I PYG L + PA+SSLHY LQC+EGMKAY D  G +RLFRPD+NM R+N SM+RL  P  D   +I+ I++L++ D  WIPEGDGYSLYIRPT ISTHP++G+ A  K K++V++SPVGPY
Sbjct:   24 AIAGIDSTKTRINKTSNPKAKTPKEKLTFGTTFSDHLLEIDWDQKTGWAPPLIRPYGPLAVDPASSSLHYALQCFEGMKAYIDDKGKIRLFRPDMNMKRMNTSMERLFLPTFDSDELIKCINQLILLDQSWIPEGDGYSLYIRPTGISTHPFIGVGASSKAKVFVIVSPVGPY 196
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9149.20718.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LT74_ECTSI5.380e-14297.55Branched-chain-amino-acid aminotransferase n=2 Tax... [more]
D8LT77_ECTSI1.560e-9479.88Branched-chain-amino-acid aminotransferase n=2 Tax... [more]
A0A024UVJ6_9STRA3.190e-7160.69Branched-chain-amino-acid aminotransferase n=3 Tax... [more]
A0A1W0A544_9STRA7.600e-6958.96Branched-chain-amino-acid aminotransferase n=1 Tax... [more]
A0A836CGN0_9STRA1.540e-6758.01Branched-chain-amino-acid aminotransferase n=1 Tax... [more]
A0A2D4BR72_PYTIN2.000e-6759.17Branched-chain-amino-acid aminotransferase n=1 Tax... [more]
A0A6G0W7D6_9STRA7.150e-6757.80Branched-chain-amino-acid aminotransferase n=1 Tax... [more]
A0A5D6XGY9_9STRA1.430e-6656.80Branched-chain-amino-acid aminotransferase n=1 Tax... [more]
A0A067CV10_SAPPC2.690e-6656.65Branched-chain-amino-acid aminotransferase n=3 Tax... [more]
A0A485KSJ3_9STRA2.840e-6654.91Branched-chain-amino-acid aminotransferase n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9149contigEcto-sp13_S_contig9149:3..2626 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score411.8
Seed ortholog evalue1.9e-112
Seed eggNOG ortholog2880.D8LT74
Preferred nameBCAT1
Model size772
KEGG rclassRC00001,RC00006,RC00036,RC00066
KEGG koko:K00036,ko:K00826
KEGG ReactionR00835,R01090,R01214,R02199,R02736,R10907,R10991
KEGG Pathwayko00030,ko00270,ko00280,ko00290,ko00480,ko00770,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko05230,map00030,map00270,map00280,map00290,map00480,map00770,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map05230
KEGG ModuleM00004,M00006,M00008,M00019,M00036,M00119,M00570
Hectar predicted targeting categoryother localisation
GOsGO:0000082,GO:0000278,GO:0002119,GO:0002164,GO:0003674,GO:0003824,GO:0004084,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006520,GO:0006549,GO:0006550,GO:0006551,GO:0006573,GO:0006807,GO:0006810,GO:0007049,GO:0007275,GO:0007589,GO:0007595,GO:0008144,GO:0008150,GO:0008152,GO:0008283,GO:0008483,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009081,GO:0009082,GO:0009083,GO:0009097,GO:0009098,GO:0009099,GO:0009790,GO:0009791,GO:0009792,GO:0009987,GO:0010033,GO:0010817,GO:0016053,GO:0016054,GO:0016740,GO:0016769,GO:0019752,GO:0019842,GO:0022402,GO:0030170,GO:0030879,GO:0031974,GO:0032501,GO:0032502,GO:0034097,GO:0036094,GO:0042221,GO:0042802,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0044843,GO:0046394,GO:0046395,GO:0046903,GO:0048037,GO:0048513,GO:0048731,GO:0048732,GO:0048856,GO:0050662,GO:0050878,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0052654,GO:0052655,GO:0052656,GO:0065007,GO:0065008,GO:0070013,GO:0070279,GO:0070887,GO:0071310,GO:0071345,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1903047,GO:1990823,GO:1990830
Exons5
EggNOG free text desc.branched-chain-amino-acid transaminase activity
EggNOG OGsCOG0115@1,KOG0975@2759
EC1.1.1.363,1.1.1.49,2.6.1.42
Cds size612
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9149.20718.1prot_Ecto-sp13_S_contig9149.20718.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9149 3..2466 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464186.562832-CDS-Ecto-sp13_S_contig9149:2..711681464186.562832-CDS-Ecto-sp13_S_contig9149:2..71Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9149 3..71 -
1681464186.5746403-CDS-Ecto-sp13_S_contig9149:377..4621681464186.5746403-CDS-Ecto-sp13_S_contig9149:377..462Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9149 378..462 -
1681464186.5839837-CDS-Ecto-sp13_S_contig9149:813..9591681464186.5839837-CDS-Ecto-sp13_S_contig9149:813..959Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9149 814..959 -
1681464186.5933027-CDS-Ecto-sp13_S_contig9149:1590..17911681464186.5933027-CDS-Ecto-sp13_S_contig9149:1590..1791Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9149 1591..1791 -
1681464186.6049004-CDS-Ecto-sp13_S_contig9149:2355..24661681464186.6049004-CDS-Ecto-sp13_S_contig9149:2355..2466Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9149 2356..2466 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464186.6161854-UTR-Ecto-sp13_S_contig9149:2466..26261681464186.6161854-UTR-Ecto-sp13_S_contig9149:2466..2626Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9149 2467..2626 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9149.20718.1

>prot_Ecto-sp13_S_contig9149.20718.1 ID=prot_Ecto-sp13_S_contig9149.20718.1|Name=mRNA_Ecto-sp13_S_contig9149.20718.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=204bp
MGPFNSQTVADGGGVETGTAEVTCSIRPVCPALSVLQTSMLSVQRTTTPR
EKQDKSKLVFGQTFSDHMLHLDWDSNGGWQAPRILPYGDLCISPAASSLH
YGLQCYEGMKAYRDADGGVRLFRPDLNMIRLNRSMDRLCFPQVDEASMIE
LISKLVVEDADWIPEGDGYSLYIRPTAISTHPYLGLAAPEKVKIYVVLSP
VGPY
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mRNA from alignment at Ecto-sp13_S_contig9149:3..2626-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9149.20718.1 ID=mRNA_Ecto-sp13_S_contig9149.20718.1|Name=mRNA_Ecto-sp13_S_contig9149.20718.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2624bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9149:3..2626- (Ectocarpus species13 EcNAP12_S_4_19m)
CGACAAACACAACATCCACCTTTACCACCCACCACCCACCACCCACCACC
CAAACAACTGAATCAAGAGAGGACAAACACCCCCCCTCTTCATTGAAGTT
CTTCGAGTTCTTCTGATTCAAGTACTTTCTTCTAAAGACCTAAAGTACTC
CTGCAGAATCATGGGACCGTTCAACAGCCAAACCGTAGCGGATGGGGGCG
GAGTGGAAACTGGAACCGCGGAGGTGACGTGCAGTATCCGTCCGGTCTGC
CCTGCCCTTTCCGTCCTCCAGGTGAGTCTGCTGAGCAGAAAAAAACAGCA
GAGCTGCTGGCTTTGCTCAACCAGAAGAGCAGTACCGAACGAAAAGAATG
GAGTTATTCCGGCGTTGGATTTGTATTGGGGCTGGGGGCTCCGGGTCTGG
TCAGCATTGAATGTTGGTTCGGTCGATAGAGAGTGAGTGTGATAACGGAC
ATTTTTGCTACAGTAGTACATGCGTTGTGAGAATGTCGCGCCACGTATGT
TATGTAGACAATGTTGCACACCCCGTTCTTTCCCATTCAGCAACGGTAGT
AGTACGTGGAGTTGTTGGTGCTTCGCTTCCCATCAACAAAAAATAATCAC
TCACGTCCTGTCTCGGCGGAAGACTCTGCACTCATTAGACGAACACATTA
TAATAACAGGCTCGGAAGGCCGCGGAAGACTTAGTACCATACGCAATGCC
TCAGATTGGGCACTGACACATCACATTTATTTCCCTGCGCTGATTCCTGT
TCGCCGCCCCTCCCTTTGGCCGTCCCCGTCTCTCTGCATTCGCCGGCTCC
CTCGCTCGCCCGGGTGTTTCCGCCGATGATTTCAGACGTCGATGCTGTCA
GTTCAGCGCACTACCACTCCTCGCGAGAAGCAGGACAAGTCGAAGCTGGT
CTTCGGGCAGACGTTCTCGGACCACATGCTGCACCTCGACTGGGACAGCA
ACGGCGGCTGGCAAGCCCCCAGGATCCTGCCGTACGGGGACCTGTGCATC
AGCCCGGCCGCCTCATCCCTGCACTACGGCTTGCAGGTAACCATGCGATG
TATAGAACTACCGCTGCTGTTGCTGCTACAGATCGATCCAAGAAGCGCGA
ACCCATCGGCCATTCCACTTGTACGTAAGAAATACAGACTAGCTTCGTCT
TTTCGTGTACTTGTTTAAGGTGAAGTGGACGTCGTCTTCAGCGTGATGTG
CATCCATCTTACCGAAGACCTGCGCCCCCCGCGGCATTTCCGGCAACAAA
CTTCTCCGTTCCCTGCCACCACTGTAGCTGTGTCATCGCACAACGCATCG
TGGGTCCAACACACCGATGATGCGTCCAACGTACCCGATTTTTAAGTCTT
CCAGTCCTGAAGAAGAAACGGAGTTCGCGGCGAGAGGGCTACGTAGTAGA
CTCCCAATACCGACCGGGGCGTTGCATTGTTCGCCTACTCGGAGGCTGAC
GCTGCGGCAAGCGGGATATGCTAAAACATACGTACGATGTCGTCGTGGTA
GTCAAGTTATGCCGGGATATGCTCCATCCACATGCATGTATGCATGTGAA
TATCCCGCCTTACATCGGCCCGCCTTCCCCGTCTTTTCGCCTCCTGTTCC
CCCCCAATTCCCTCTTCTCGTCCTTCCATATTCAAACACGGGGACACCAC
CGTGTTCACGATCACAGTGCTACGAGGGCATGAAGGCCTACCGTGATGCG
GACGGCGGCGTGCGGCTCTTCCGGCCCGACCTCAACATGATCCGCCTCAA
CAGGTCCATGGACCGTTTGTGCTTCCCTCAGGTGGATGAGGCGAGCATGA
TCGAGCTCATCAGGTGAGAGTCTTGTCACCAGCAGGGGAGGGGGTCGGGA
GTCCTGTGCGTGCTGGCAGAAATAAAGGTGTTGCTGGCCGATGCTACTCG
AGCTATGGGTATCGTACCAATCAACTCCGGCGGGCGTGCCTGGTTTGCTG
CCGCTTCGTTGGCAGCTGCATGAGGACAGAAAGAACACTCGCAGCTATAC
ATTGCTCGGACGCCCGTTTTATAGACGATGTTCGCCTCAAATTTGGACGA
ACAGACCATGTGCGATATCAAAAAGAATACATCACGCCCCTCTAACCCGC
CCAACCATTCTCCGCGCTTCCTTTCTCATTCCGTACGACAAACGATCCGT
TGAATCGATTTCAGCAAGCTCGTAGTTGAGGACGCGGATTGGATCCCAGA
GGGCGATGGATACTCGCTCTACATTCGCCCGACAGCCATCAGCACCCACG
TGAGAGCGCTACATTTGTTGCTTTTTTGTCTGTATTTTCATTTTATTTGT
TTGCGGTTTCAGCCGAATTCATGCACCGTAGCGCTCCGTTTGCGAGCGCA
CCGTGAAGGAGGGATGAGGGTAGTCAGATGAGACTCTCAAACGTGTTGCA
TCCACGTAGACTACAATATATGACATAGTTCCTCGACACGCTCGAAAGGA
AGCCCACCTGTCTGCTTGCTTGTATGTTGTGGATGCTCGGCGGTGCCGGC
GAACTTACCTCTCCTCTCTTGGTCGGTTGTGTCATTTCTCCTGCATATTC
TCCAGCCGTACCTGGGGCTCGCTGCACCGGAGAAGGTCAAGATCTACGTC
GTCCTGTCTCCTGTCGGCCCCTAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9149:3..2626-

>mRNA_Ecto-sp13_S_contig9149.20718.1 ID=mRNA_Ecto-sp13_S_contig9149.20718.1|Name=mRNA_Ecto-sp13_S_contig9149.20718.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=612bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9149:3..2626- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGACCGTTCAACAGCCAAACCGTAGCGGATGGGGGCGGAGTGGAAAC
TGGAACCGCGGAGGTGACGTGCAGTATCCGTCCGGTCTGCCCTGCCCTTT
CCGTCCTCCAGACGTCGATGCTGTCAGTTCAGCGCACTACCACTCCTCGC
GAGAAGCAGGACAAGTCGAAGCTGGTCTTCGGGCAGACGTTCTCGGACCA
CATGCTGCACCTCGACTGGGACAGCAACGGCGGCTGGCAAGCCCCCAGGA
TCCTGCCGTACGGGGACCTGTGCATCAGCCCGGCCGCCTCATCCCTGCAC
TACGGCTTGCAGTGCTACGAGGGCATGAAGGCCTACCGTGATGCGGACGG
CGGCGTGCGGCTCTTCCGGCCCGACCTCAACATGATCCGCCTCAACAGGT
CCATGGACCGTTTGTGCTTCCCTCAGGTGGATGAGGCGAGCATGATCGAG
CTCATCAGCAAGCTCGTAGTTGAGGACGCGGATTGGATCCCAGAGGGCGA
TGGATACTCGCTCTACATTCGCCCGACAGCCATCAGCACCCACCCGTACC
TGGGGCTCGCTGCACCGGAGAAGGTCAAGATCTACGTCGTCCTGTCTCCT
GTCGGCCCCTAC
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