mRNA_Ecto-sp13_S_contig9147.20716.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9147.20716.1 vs. uniprot
Match: A0A6H5JQ71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ71_9PHAE) HSP 1 Score: 701 bits (1810), Expect = 5.880e-235 Identity = 574/736 (77.99%), Postives = 581/736 (78.94%), Query Frame = 1
Query: 1 RANRVWARYFVTCAICRGSFSRHGSSATFCAECNCHVCGSCDCTVFHLAYQDKLWEEMEGKEERGKKAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDKPAAAPSGGVKRAGKAGGKDKDKAGDGEKAMPGQRSPGLGKKGHDRSSSPNKASSSASTESNSEDEYSPSSPRDPKYHDNRTSPATSTAAAIINAXXXXXXXXXXXXXXKKSGEGRRAXXXXXXXXXXXXPPXXXXXXXXXXXXXXXXXXXXXXEEEEVERGQRCPGKKQGRRDPQQPAAAGRENGKTLFSAL-----------------------------WKGSPTATASRALEDDGEEPWVVVGGTGGKRAGGTKWNKGHQXXXXXXXXXXXXXXXXXXXXXXXXXX--WASESSPANVAVPAATPVRSSTVASPXXXXXXXATGTAPRVSAPSPSHVQVVPHGGGGPGGAWGGAGVPKPAVPPAVSYRPVGTPSSTTA-KGVLRQPVANGLQFAPQRQGPGPGSVWGASSSITDARHNPLSVAPPVXXXXXXXXXXXXAGSSLGPPFAGLPAAARAPGSSNRAGVIGPRPQAAAA------VAKTVGPSSRGVSTANALSPASATVGSRVTTTVSSVNSKGGTVSSSAGMSPAGVAIPRQEAPIGGXXXXXXXXXXXXXVSSLFRSASTGSEALIENEKLVSFLLETGSILALARRLEEEEDWRRPVPSPINSHPG 2094
RANRVWARYFVTCAICRGSFSRHGSSATFCAECNCHVCGSCDCTVFHLAYQDKLWEEMEGKE+RGKKAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GDKPAA P GGVK AG++GGKDKDKAGDGEKAMPGQRSPGLG KGHDRSSSPNKASSSASTESNSEDEYSPSSPRD KYHDN TSPATSTA XXXXXXXXXXXXXX XXXXXXXXXXXX XXXX XXXXXXXXXXXX PGKKQGRRDPQQPAAAGRENGKTLFSA WKGS TATASRAL XXXXXXXXXXXXXXXXXXXXXXXXXX WASESSPANVAV AATPVRSS VASPX ATGTAPRVSAPSPS VQVVP GGGGPGGAWGGAGV KPAVPPAVS PVGTPSSTTA KGVLR PVANGLQFAPQRQGPGP SVWGAS SI DARHNPLSVAP XXXXXXXXXX GSSLG PFAGLPAAARAPG SNRAGVIG RPQAAAA VAK+VGPSSRGV TANALSPASATVG+RVTTTV+SVNSKGGTVSSS G+SPAGV IPRQEAPIG VSSLFRSASTGSEALIENEKLVSFLLETGSILALARRLEEEEDWRRPVPSPINS PG
Sbjct: 650 RANRVWARYFVTCAICRGSFSRHGSSATFCAECNCHVCGSCDCTVFHLAYQDKLWEEMEGKEQRGKKAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAGDKPAAVPPGGVKWAGESGGKDKDKAGDGEKAMPGQRSPGLGTKGHDRSSSPNKASSSASTESNSEDEYSPSSPRDSKYHDNCTSPATSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGRAQAXXXXXXXXXXXXXXXXXXXXXXRPGKKQGRRDPQQPAAAGRENGKTLFSAXXXXXXXXXXXXXXXXXXXXXGTAVAVANRWKGSSTATASRALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWASESSPANVAVSAATPVRSSAVASPXPAAVS-ATGTAPRVSAPSPSLVQVVPPGGGGPGGAWGGAGVVKPAVPPAVSSGPVGTPSSTTAAKGVLRHPVANGLQFAPQRQGPGPASVWGASPSIMDARHNPLSVAPSAXXXXXXXXXX---GSSLGAPFAGLPAAARAPGPSNRAGVIGSRPQAAAAXXXXXXVAKSVGPSSRGVPTANALSPASATVGNRVTTTVASVNSKGGTVSSSGGVSPAGVVIPRQEAPIGSGSSSSANSSSS--VSSLFRSASTGSEALIENEKLVSFLLETGSILALARRLEEEEDWRRPVPSPINSRPG 1379
BLAST of mRNA_Ecto-sp13_S_contig9147.20716.1 vs. uniprot
Match: D8LKX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKX1_ECTSI) HSP 1 Score: 586 bits (1511), Expect = 9.980e-190 Identity = 517/710 (72.82%), Postives = 522/710 (73.52%), Query Frame = 1
Query: 1 RANRVWARYFVTCAICRGSFSRHGSSATFCAECNCHVCGSCDCTVFHLAYQDKLWEEMEGKEERGKKAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDKPAAAPSGGVKRAGKAGGKDKDKAGDGEKAMPGQRSPGLGKKGHDRSSSPNKASSSASTESNSEDEYSPSSPRDPKYHDNRTSPATSTAAAIINAXXXXXXXXXXXXXXKKSGEGRRAXXXXXXXXXXXXPPXXXXXXXXXXXXXXXXXXXXXXEEEEVERGQRCPGKKQGRRDPQQPAAAGRENGKTLFSALWKGSPTATASRALEDDGEEPWVVVGGTGGKRAGGTKWNKGHQXXXXXXXXXXXXXXXXXXXXXXXXXXWASESSPANVAVPAATPVRSSTVASPXXXXXXXATGTAPRVSAPSPSHVQVVPHGGGGPGGAWGGAGVPKPAVPPAVSYRPVGTPSSTTAKGVLRQPVANGLQFAPQRQGPGPGSVWGASSSITDARHNPLSVAPPVXXXXXXXXXXXXAGSSLGPPFAGLPAAARAPGSSNRAGVIGPRPQA-------AAAVAKTVGPSSRGVSTANALSPASATVGSRVTTTVSSVNSKGGT-----VSSSAGMSPAGVAIPRQEAPIGGXXXXXXXXXXXXXVSSLFRSASTGSEALIENEKLVSFLLETGSILALARRLEEEEDWRRPVPSPINSHPG 2094
RA+RVWARYFVTCAICRG FSRHGSSATFCAECNCHVCGSCDCTVFHLAYQDKLWEEMEGKEERGKKAQXXXXXXXXXXXXXXXXX XXXXXXXXXXX GGVKRAGKAGGKDKDKA DGEKAMPGQRSPGLGKKGHDRSSSPNKASSSASTESNSEDEYSPSSPRDPKYHDNRTSPATSTA XXXXXXXXXXXXXX XXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXX PANVAVPAAT XXXXXXXATGTAPRVS PSPSHVQVVP GGGGPGGAWGGAGV KPAVPPAVS RPVGTPSSTTAKGVLRQPVANG QFAPQRQGPGPGSVWGASSSI DARHNPLSVAPP XXXXX AGSSLG PFAGLPAAARAPG SNRAGVIG RPQA AA VAK VGPSSRG+ TANALSP S TVGSRVTTT +SVNSKGGT VSSS G+SPAGVAIP QEAP+GG XXXXXX VSSLFRSASTGSEALIENEKLVSFLLETGSILALARRLEEEEDWRRPVPS INS PG
Sbjct: 758 RASRVWARYFVTCAICRGFFSRHGSSATFCAECNCHVCGSCDCTVFHLAYQDKLWEEMEGKEERGKKAQXXXXXXXXXXXXXXXXXAAKELAIDPLPKEAKAXXXXXXXXXXXX-XXXXXXXXGGVKRAGKAGGKDKDKASDGEKAMPGQRSPGLGKKGHDRSSSPNKASSSASTESNSEDEYSPSSPRDPKYHDNRTSPATSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPANVAVPAATLXXXXXXXXXXXXXXXXATGTAPRVSVPSPSHVQVVPPGGGGPGGAWGGAGVVKPAVPPAVSSRPVGTPSSTTAKGVLRQPVANGSQFAPQRQGPGPGSVWGASSSIMDARHNPLSVAPPASSASSXXXXX--AGSSLGAPFAGLPAAARAPGPSNRAGVIGSRPQATATTVAAAAVVAKPVGPSSRGLPTANALSPTSTTVGSRVTTTAASVNSKGGTGVAGTVSSSGGVSPAGVAIPWQEAPVGGGSGSSXXXXXXS-VSSLFRSASTGSEALIENEKLVSFLLETGSILALARRLEEEEDWRRPVPSSINSRPG 1462
BLAST of mRNA_Ecto-sp13_S_contig9147.20716.1 vs. uniprot
Match: A0A835Z8E3_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8E3_9STRA) HSP 1 Score: 102 bits (255), Expect = 7.780e-19 Identity = 41/69 (59.42%), Postives = 54/69 (78.26%), Query Frame = 1
Query: 1 RANRVWARYFVTCAICRGSFSRHGSSATFCAECNCHVCGSCDCTVFHLAYQDKLWEEMEGKEERGKKAQ 207
RA+R+W YFV+CAIC SFSRH A FC EC CHVC CDCT+FHL+YQ++LW+ +EGKE+ ++A+
Sbjct: 543 RASRIWKLYFVSCAICCRSFSRHSPHARFCEECQCHVCRGCDCTIFHLSYQEQLWQTLEGKEKGAQQAR 611
BLAST of mRNA_Ecto-sp13_S_contig9147.20716.1 vs. uniprot
Match: A0A067CNS0_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CNS0_SAPPC) HSP 1 Score: 97.8 bits (242), Expect = 1.890e-17 Identity = 39/69 (56.52%), Postives = 52/69 (75.36%), Query Frame = 1
Query: 1 RANRVWARYFVTCAICRGSFSRHGSSATFCAECNCHVCGSCDCTVFHLAYQDKLWEEMEGKEERGKKAQ 207
RA R+W ++FVTCAIC G+FS+H + FCAEC C+VC +CDCT+FHL YQ+ LW+E KE K+A+
Sbjct: 442 RATRIWQQHFVTCAICMGAFSKHSNDTFFCAECKCNVCKNCDCTIFHLKYQESLWKEETEKETTEKQAK 510
BLAST of mRNA_Ecto-sp13_S_contig9147.20716.1 vs. uniprot
Match: A0A485LIM5_9STRA (Aste57867_21593 protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A485LIM5_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 2.230e-17 Identity = 40/69 (57.97%), Postives = 51/69 (73.91%), Query Frame = 1
Query: 1 RANRVWARYFVTCAICRGSFSRHGSSATFCAECNCHVCGSCDCTVFHLAYQDKLWEEMEGKEERGKKAQ 207
RA R+W ++FVTCAIC G+FS+H + FCAEC C+VC +CDCTVFHL YQ+ LW+E KE KA+
Sbjct: 550 RATRIWQQHFVTCAICSGAFSKHSNDTFFCAECKCNVCKNCDCTVFHLKYQESLWQEETEKETSEMKAK 618
BLAST of mRNA_Ecto-sp13_S_contig9147.20716.1 vs. uniprot
Match: A0A418B1B5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B1B5_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 2.580e-17 Identity = 40/69 (57.97%), Postives = 52/69 (75.36%), Query Frame = 1
Query: 1 RANRVWARYFVTCAICRGSFSRHGSSATFCAECNCHVCGSCDCTVFHLAYQDKLWEEMEGKEERGKKAQ 207
RA+R+W ++FVTCAIC G+FS+H + FCAEC C+VC +CDCTVFHL YQ+ LW+E KE KA+
Sbjct: 662 RASRIWQQHFVTCAICSGAFSKHSNDTFFCAECKCNVCKNCDCTVFHLKYQESLWKEETEKETSEMKAK 730
BLAST of mRNA_Ecto-sp13_S_contig9147.20716.1 vs. uniprot
Match: D0NSN0_PHYIT (Importin subunit alpha, putative n=13 Tax=Peronosporaceae TaxID=4777 RepID=D0NSN0_PHYIT) HSP 1 Score: 96.7 bits (239), Expect = 5.610e-17 Identity = 40/68 (58.82%), Postives = 50/68 (73.53%), Query Frame = 1
Query: 1 RANRVWARYFVTCAICRGSFSRHGSSATFCAECNCHVCGSCDCTVFHLAYQDKLWEEMEGKEERGKKA 204
RA+R+W ++FVTCAIC G FS+H + FCAEC C+VC CDCTVFHL YQ+ LW+E KE K+A
Sbjct: 571 RASRIWQQHFVTCAICLGPFSKHSNDTFFCAECKCNVCKHCDCTVFHLKYQESLWKEETEKETNEKQA 638
BLAST of mRNA_Ecto-sp13_S_contig9147.20716.1 vs. uniprot
Match: A0A7S2R949_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R949_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 7.030e-17 Identity = 37/68 (54.41%), Postives = 54/68 (79.41%), Query Frame = 1
Query: 1 RANRVWARYFVTCAICRGSFSRHGSSATFCAECNCHVCGSCDCTVFHLAYQDKLWEEMEGKEERGKKA 204
RA+R+W ++FVTCAIC S+S+H + A FC EC CHVC +C+CTVFHL+YQ++LW+++ +E K+A
Sbjct: 477 RASRIWKQHFVTCAICNSSYSKHSAEARFCDECKCHVCVNCNCTVFHLSYQEELWKDLTTQEASKKQA 544
BLAST of mRNA_Ecto-sp13_S_contig9147.20716.1 vs. uniprot
Match: A0A484E1V0_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E1V0_BRELC) HSP 1 Score: 95.5 bits (236), Expect = 1.280e-16 Identity = 40/68 (58.82%), Postives = 50/68 (73.53%), Query Frame = 1
Query: 1 RANRVWARYFVTCAICRGSFSRHGSSATFCAECNCHVCGSCDCTVFHLAYQDKLWEEMEGKEERGKKA 204
RA+R+W ++FVTCAIC G FS+H + FCAEC C+VC +CDCTVFHL YQ+ LW E KE K+A
Sbjct: 568 RASRIWQQHFVTCAICLGPFSKHSNDTFFCAECKCNVCTTCDCTVFHLKYQESLWLEETVKETNEKQA 635
BLAST of mRNA_Ecto-sp13_S_contig9147.20716.1 vs. uniprot
Match: A0A7S1ZSI3_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZSI3_TRICV) HSP 1 Score: 92.4 bits (228), Expect = 1.550e-16 Identity = 39/68 (57.35%), Postives = 54/68 (79.41%), Query Frame = 1
Query: 1 RANRVWARYFVTCAICRGSFSRHG-SSATFCAECNCHVCGSCDCTVFHLAYQDKLWEEMEGKEERGKK 201
RA+R+W ++FV+CA+CR SFSRH + A FC EC CHVC +CDC V+HL+YQ++LW EG+++ GKK
Sbjct: 226 RASRIWKQHFVSCALCRQSFSRHRPADARFCNECKCHVCSNCDCQVYHLSYQEELWA-AEGEKDTGKK 292 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9147.20716.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9147.20716.1 >prot_Ecto-sp13_S_contig9147.20716.1 ID=prot_Ecto-sp13_S_contig9147.20716.1|Name=mRNA_Ecto-sp13_S_contig9147.20716.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=699bp RANRVWARYFVTCAICRGSFSRHGSSATFCAECNCHVCGSCDCTVFHLAYback to top mRNA from alignment at Ecto-sp13_S_contig9147:1416..5845- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9147.20716.1 ID=mRNA_Ecto-sp13_S_contig9147.20716.1|Name=mRNA_Ecto-sp13_S_contig9147.20716.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4430bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9147:1416..5845- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9147:1416..5845- >mRNA_Ecto-sp13_S_contig9147.20716.1 ID=mRNA_Ecto-sp13_S_contig9147.20716.1|Name=mRNA_Ecto-sp13_S_contig9147.20716.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2097bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9147:1416..5845- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |