mRNA_Ecto-sp13_S_contig91429.20711.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig91429.20711.1 vs. uniprot
Match: A0A6H5JNJ8_9PHAE (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNJ8_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 1.160e-18 Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 1
Query: 1 AASVAFKRCSQCHAVGYCSRECQKAGWKKHRKACAAVNS 117
AASVAFKRCSQCHAVGYCSRECQKAGWKKHRKAC+AVNS
Sbjct: 370 AASVAFKRCSQCHAVGYCSRECQKAGWKKHRKACSAVNS 408
BLAST of mRNA_Ecto-sp13_S_contig91429.20711.1 vs. uniprot
Match: A0A8K0WV57_9HYPO (Uncharacterized protein n=1 Tax=Stachybotrys elegans TaxID=80388 RepID=A0A8K0WV57_9HYPO) HSP 1 Score: 55.1 bits (131), Expect = 6.050e-8 Identity = 20/31 (64.52%), Postives = 25/31 (80.65%), Query Frame = 1
Query: 10 VAFKRCSQCHAVGYCSRECQKAGWKKHRKAC 102
V+ KRC++CH YCSRECQKA WK+HR+ C
Sbjct: 15 VSLKRCAKCHTTPYCSRECQKADWKQHRRTC 45
BLAST of mRNA_Ecto-sp13_S_contig91429.20711.1 vs. uniprot
Match: A0A0F9X4H5_TRIHA (MYND-type zinc finger protein samB n=4 Tax=Trichoderma TaxID=5543 RepID=A0A0F9X4H5_TRIHA) HSP 1 Score: 55.1 bits (131), Expect = 7.640e-8 Identity = 21/36 (58.33%), Postives = 27/36 (75.00%), Query Frame = 1
Query: 10 VAFKRCSQCHAVGYCSRECQKAGWKKHRKACAAVNS 117
V+ KRC++CH YCSR+CQKA WK H+K CA +S
Sbjct: 15 VSLKRCAKCHTTPYCSRDCQKADWKAHKKICAKNHS 50
BLAST of mRNA_Ecto-sp13_S_contig91429.20711.1 vs. uniprot
Match: A0A7S3V4I3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V4I3_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 1.110e-7 Identity = 21/33 (63.64%), Postives = 25/33 (75.76%), Query Frame = 1
Query: 16 FKRCSQCHAVGYCSRECQKAGWKKHRKACAAVN 114
FKRC+QCHAV YCSR CQK WK H+ CA ++
Sbjct: 61 FKRCAQCHAVCYCSRNCQKMDWKNHKMDCADID 93
BLAST of mRNA_Ecto-sp13_S_contig91429.20711.1 vs. uniprot
Match: S8AH82_DACHA (MYND-type zinc finger protein samB n=1 Tax=Dactylellina haptotyla (strain CBS 200.50) TaxID=1284197 RepID=S8AH82_DACHA) HSP 1 Score: 54.3 bits (129), Expect = 1.310e-7 Identity = 21/38 (55.26%), Postives = 27/38 (71.05%), Query Frame = 1
Query: 4 ASVAFKRCSQCHAVGYCSRECQKAGWKKHRKACAAVNS 117
AS K C++C +V YCSR+CQKA WK H+K C VN+
Sbjct: 15 ASEDLKHCARCKSVNYCSRDCQKANWKHHKKVCGKVNT 52
BLAST of mRNA_Ecto-sp13_S_contig91429.20711.1 vs. uniprot
Match: A0A1W5D628_9LECA (MYND-type zinc finger protein samB n=2 Tax=Lasallia pustulata TaxID=136370 RepID=A0A1W5D628_9LECA) HSP 1 Score: 53.9 bits (128), Expect = 2.160e-7 Identity = 20/35 (57.14%), Postives = 25/35 (71.43%), Query Frame = 1
Query: 7 SVAFKRCSQCHAVGYCSRECQKAGWKKHRKACAAV 111
S+ KRC++CH YCSR+CQKA WK H+K CA
Sbjct: 52 SIPLKRCAKCHTGLYCSRDCQKADWKSHKKTCAVT 86
BLAST of mRNA_Ecto-sp13_S_contig91429.20711.1 vs. uniprot
Match: A0A0N0RZN0_9EURO (MYND-type zinc finger protein samB n=1 Tax=Penicillium nordicum TaxID=229535 RepID=A0A0N0RZN0_9EURO) HSP 1 Score: 53.5 bits (127), Expect = 3.140e-7 Identity = 20/32 (62.50%), Postives = 24/32 (75.00%), Query Frame = 1
Query: 13 AFKRCSQCHAVGYCSRECQKAGWKKHRKACAA 108
A + CS+CH YCSR+CQKA WKKH+K C A
Sbjct: 218 ALRNCSRCHKAKYCSRDCQKADWKKHKKVCKA 249
BLAST of mRNA_Ecto-sp13_S_contig91429.20711.1 vs. uniprot
Match: A0A8K0UZV9_9AGAM (Uncharacterized protein n=1 Tax=Cristinia sonorae TaxID=1940300 RepID=A0A8K0UZV9_9AGAM) HSP 1 Score: 53.5 bits (127), Expect = 3.770e-7 Identity = 19/32 (59.38%), Postives = 24/32 (75.00%), Query Frame = 1
Query: 16 FKRCSQCHAVGYCSRECQKAGWKKHRKACAAV 111
KRC CH V YCSRECQKA W++H++ C A+
Sbjct: 220 LKRCGTCHQVSYCSRECQKADWRRHKQFCQAI 251
BLAST of mRNA_Ecto-sp13_S_contig91429.20711.1 vs. uniprot
Match: A0A6A6GMU3_9PEZI (MYND-type zinc finger protein samB n=1 Tax=Elsinoe ampelina TaxID=302913 RepID=A0A6A6GMU3_9PEZI) HSP 1 Score: 53.5 bits (127), Expect = 3.870e-7 Identity = 19/32 (59.38%), Postives = 25/32 (78.12%), Query Frame = 1
Query: 16 FKRCSQCHAVGYCSRECQKAGWKKHRKACAAV 111
K C++C VGYC RECQK GWK+H+K CA++
Sbjct: 1057 MKACARCKKVGYCGRECQKKGWKRHKKECASL 1088
BLAST of mRNA_Ecto-sp13_S_contig91429.20711.1 vs. uniprot
Match: A0A8K0PH01_9PEZI (Uncharacterized protein n=1 Tax=Elsinoe batatas TaxID=2601811 RepID=A0A8K0PH01_9PEZI) HSP 1 Score: 53.5 bits (127), Expect = 3.870e-7 Identity = 19/32 (59.38%), Postives = 25/32 (78.12%), Query Frame = 1
Query: 16 FKRCSQCHAVGYCSRECQKAGWKKHRKACAAV 111
K C++C VGYC RECQK GWK+H+K CA++
Sbjct: 1051 IKACAKCKKVGYCGRECQKKGWKRHKKECASL 1082 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig91429.20711.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig91429.20711.1 >prot_Ecto-sp13_S_contig91429.20711.1 ID=prot_Ecto-sp13_S_contig91429.20711.1|Name=mRNA_Ecto-sp13_S_contig91429.20711.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=40bp AASVAFKRCSQCHAVGYCSRECQKAGWKKHRKACAAVNS*back to top mRNA from alignment at Ecto-sp13_S_contig91429:26..145+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig91429.20711.1 ID=mRNA_Ecto-sp13_S_contig91429.20711.1|Name=mRNA_Ecto-sp13_S_contig91429.20711.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=120bp|location=Sequence derived from alignment at Ecto-sp13_S_contig91429:26..145+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig91429:26..145+ >mRNA_Ecto-sp13_S_contig91429.20711.1 ID=mRNA_Ecto-sp13_S_contig91429.20711.1|Name=mRNA_Ecto-sp13_S_contig91429.20711.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=120bp|location=Sequence derived from alignment at Ecto-sp13_S_contig91429:26..145+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |