mRNA_Ecto-sp13_S_contig12495.2071.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12495.2071.1
Unique NamemRNA_Ecto-sp13_S_contig12495.2071.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig12495.2071.1 vs. uniprot
Match: D7FRB3_ECTSI (Ubiquitin carboxyl-terminal hydrolase 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRB3_ECTSI)

HSP 1 Score: 953 bits (2463), Expect = 0.000e+0
Identity = 593/809 (73.30%), Postives = 608/809 (75.15%), Query Frame = 1
Query:    1 PRHEEGETADRGGEVVDAITSTAAGSDEGSPADGIDVEAVVTAEKPRGQEEG-QEAAVVLDGTHTSGSDSGDGDGSAGNTGLALMTPKPTDSAVSGAESLGSSGHESRNGVTSTPHSTSRAAGVCERVDCNGGSVDAGSPPPPSPTCEDSFARIASHGQAGQGTRAEAGTASCGQEQQAAEMGLRDRFEADGNLDGAGTFSSSSSLGGCTTGDTQGSTDVCEDGRSAFGSECSEGNGNDKKHEESAAAPTNALSTCLDGPDVLGSEAQRKRQRTNSRAPDSTTACLVGGDGSVEGKAVGVERGRESQSAGGGAVADENGGDKHADSSHANGDRCGGEEEPSSVAVSPASASPPGAAAA-VPRNPLDRLKEPSARKKLERRHDPDGIDLYGCLDHFMAEERLVAADGNGYHCEGCSSREGAAXXXXXXXEGGVKAKEGATTSLQNARKRLLMLGQPPGVLVCHLKRLQAKKKIIRSVEFPIELDMTPYFWLDPDAPLPPTQTRYCLSGLVQHRGSRFGGHYIAYVRDRDGWKHASDSDIRTATLPEIKACEVSSTL-----------------------------------QLLETVGESGVQTIDEA-----------------DEDAKXXXXXXXXXXXXXXXXXXXXXXXXL--------------------------------------------------------EGETAAVPVGACERQGGGGYTDPSGEGKRERKDTSVTSVAEKSNEVAVAAXXXXXXXXXDEKGGSSXASTGEQDQEQKAEPVASSEGWSEAEASGDVQV 2097
            PRHEEGETAD GGEVVDAI STAAGSDEGSPADG DVEAVVTAEKPRGQEE  QEAAVVLDGTHTSGSD GDGDGSAGNTGLA MTPKPTDSAV GAESLGSSGHESRNG TS PHSTSRAAGVCERVDCNGGSVDAGSPPPP    EDS A IAS GQ GQGT A AGT S GQEQQAAEMGLRDRFEADGNLDGAGTFSSSSSLGGCTTGDTQGSTDVCEDGRSAFGSECSEGNGNDKK+EESAAAPTN LS CLDGP+V  SEA+R+RQR++SRAPDSTTACL GGDGSVEGKAVGVER RESQSAGGGA ADENGGDKHADSSHANGDRCG     SSVAVSPA+ASPPGAAAA VPRNPLDRL+EPSARKKLERRHDPDGIDLYGCLDHFMAEE+LVAADGNGYHCE CSSRE   XXXXXX EGGVKAKEGAT S QNARKRLLMLGQPPGVLVCHLKRLQAKKKIIRSVEFPIELDMTPYFWLDPDAPL PTQTRYCLSGLVQHRGSR GGHYIAYVRDRDGWKHASDS IRTATLPEIKACE                                        +  E  GE GV+ +D+A                 DE   XXXXXXXXXXXXXXXXXXXXXXXX                                                         EGETA VPVG C+ Q GGG T+PSGEGK ERKD SVTSV                    DEKGGSS AS GEQDQEQ AEPVASSEG  EAEASG VQV
Sbjct:  435 PRHEEGETADGGGEVVDAIASTAAGSDEGSPADGTDVEAVVTAEKPRGQEEEFQEAAVVLDGTHTSGSDIGDGDGSAGNTGLASMTPKPTDSAVPGAESLGSSGHESRNGDTSIPHSTSRAAGVCERVDCNGGSVDAGSPPPPPTAREDSLAGIASGGQVGQGTGAVAGTVSNGQEQQAAEMGLRDRFEADGNLDGAGTFSSSSSLGGCTTGDTQGSTDVCEDGRSAFGSECSEGNGNDKKYEESAAAPTNGLSKCLDGPEVFESEAERERQRSHSRAPDSTTACLEGGDGSVEGKAVGVERDRESQSAGGGAAADENGGDKHADSSHANGDRCGXXXXXSSVAVSPATASPPGAAAAAVPRNPLDRLQEPSARKKLERRHDPDGIDLYGCLDHFMAEEKLVAADGNGYHCESCSSRE-EXXXXXXXGEGGVKAKEGATRSHQNARKRLLMLGQPPGVLVCHLKRLQAKKKIIRSVEFPIELDMTPYFWLDPDAPLSPTQTRYCLSGLVQHRGSRLGGHYIAYVRDRDGWKHASDSAIRTATLPEIKACEAYMLFYECCDLIDPVVADAAEGSVGSVSDGGVHQLDGRERKADENTGEPGVEALDKAKXXXXXXXXXXXXLDGADEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGETAVVPVGPCKGQEGGGVTEPSGEGKGERKDESVTSVG-----------------AVDEKGGSSGASAGEQDQEQNAEPVASSEGRGEAEASGYVQV 1225          
BLAST of mRNA_Ecto-sp13_S_contig12495.2071.1 vs. uniprot
Match: A0A6H5JSL1_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL1_9PHAE)

HSP 1 Score: 914 bits (2361), Expect = 3.400e-316
Identity = 574/807 (71.13%), Postives = 588/807 (72.86%), Query Frame = 1
Query:    1 PRHEEGETADRGGEVVDAITSTAAGSDEGSPADGIDVEAVVTAEKPRGQEEGQEAAVVLDGTHTSGSDSGDGDGSAGNTGLALMTPKPTDSAVSGAESLGSSGHESRNGVTSTPHSTSRAAGVCERVDCNGGSVDAGSPPPPSPTCEDSFARIASHGQAGQGTRAEAGTASCGQEQQAAEMGLRDRFEADGNLDGAGTFSSSSSLGGCTTGDTQGSTDVCEDGRSAFGSECSEGNGNDKKHEESAAAPTNALSTCLDGPDVLGSEAQRKRQRTNSRAPDSTTACLVGGDGSVEGKAVGVERGRESQSAGGGAVADENGGDKHADSSHANGDRCGGEEEPSSVAVSPASASPPGAAAAVPRNPLDRLKEPSARKKLERRHDPDGIDLYGCLDHFMAEERLVAADGNGYHCEGCSSREGAAXXXXXXXEGGVKAKEGATTSLQNARKRLLMLGQPPGVLVCHLKRLQAKKKIIRSVEFPIELDMTPYFWLDPDAPLPPTQTRYCLSGLVQHRGSRFGGHYIAYVRDRDGWKHASDSDIRTATLPEIKACEVSSTL-----------------------------------QLLETVGE-----------------SGVQTIDEADEDAKXXXXXXXXXXXXXXXXXXXXXXXXLEGET--------------------------------------------------------AAVPVGACERQGGGGYTDPSGEGKRERKDTSVTSVAEKSNEVAVAAXXXXXXXXXDEKGGSSXASTGEQDQEQKAEPVASSEGWSEAEASGDVQV 2097
            PRHEEGETA RGGEVVDAI S AAGSDEGS ADG DVEAVV AEKPRGQEEGQEAAVVLDGTHTSGS        AGNTGLA MTPKPTDSAV GAESLGSSGHES NGVTS PHSTSRAAGVCERVD NGGSVDAGSPPPP P+ E+SFA IA+ GQ GQGT A AGTAS GQEQQAA+MGLRDRFEADGNLDGAG F SS SLGGCTTGDTQGS DVCEDGRSAFGSECSEGNGNDKKHEESA APTNALS  LDG D LGSEA+RKRQRTNSRAPDSTTACL GGD SVEGKAVGVER RESQSAGGGAVADENGGDKHADSS               V  SPA+ASPPGAAAAVPR+PLDRL+EPSARKKLERRHDPDGIDLYGCLDHFMAEE LVAADGNGYHCE CSSRE  A       EGGVKAKEGAT S QNARKRLLMLGQPPGVLVCHLKRLQAKKKIIR VEFPIELDMTPYFWLDPDAPL P  TRYCLSGLVQHRGSRFGGHYIAYVRDRDGWKHASDSDIRTATLPEIKACE                                        + +E  GE                 SGV  +D ADE+A+       XXXXXXXXXXXXXXXXX                                                             AAVPVGACE Q GGG T PSGEGK ERKD SV SVAEKSNE AVAAXXXXXXX  DEKGG S ASTGEQDQEQKAEPV SS+G SEAEASG VQV
Sbjct:  713 PRHEEGETAGRGGEVVDAIASMAAGSDEGSAADGTDVEAVVAAEKPRGQEEGQEAAVVLDGTHTSGS--------AGNTGLASMTPKPTDSAVPGAESLGSSGHESWNGVTSIPHSTSRAAGVCERVDWNGGSVDAGSPPPP-PSYENSFAGIANCGQVGQGTGAVAGTASNGQEQQAADMGLRDRFEADGNLDGAGPFCSSGSLGGCTTGDTQGSIDVCEDGRSAFGSECSEGNGNDKKHEESAVAPTNALSKYLDGSDGLGSEAERKRQRTNSRAPDSTTACLEGGDVSVEGKAVGVERSRESQSAGGGAVADENGGDKHADSS---------------VTDSPATASPPGAAAAVPRDPLDRLQEPSARKKLERRHDPDGIDLYGCLDHFMAEEELVAADGNGYHCESCSSRE-EAVAAATGGEGGVKAKEGATRSHQNARKRLLMLGQPPGVLVCHLKRLQAKKKIIRRVEFPIELDMTPYFWLDPDAPLSPNHTRYCLSGLVQHRGSRFGGHYIAYVRDRDGWKHASDSDIRTATLPEIKACEAYMLFYERCDLIDPVVADAADGSVGSVSDGGVDQPDGRERKAVENAGELGVEALDKAKANEKVEGSGVDVLDGADENAEEASVRVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVPVGACEGQEGGGVTYPSGEGKGERKDESVISVAEKSNEAAVAAXXXXXXXV-DEKGGRSGASTGEQDQEQKAEPVTSSDGRSEAEASGGVQV 1493          
BLAST of mRNA_Ecto-sp13_S_contig12495.2071.1 vs. uniprot
Match: UPI00193CA165 (ubiquitin carboxyl-terminal hydrolase 16 n=1 Tax=Nilaparvata lugens TaxID=108931 RepID=UPI00193CA165)

HSP 1 Score: 80.1 bits (196), Expect = 1.010e-11
Identity = 58/169 (34.32%), Postives = 83/169 (49.11%), Query Frame = 1
Query: 1156 LYGCLDHFMAEERLVAADGNGYHCEGCSSREGAAXXXXXXXEGGVKAKE-GATTSLQNARKRLLMLGQPPGVLVCHLKRLQAKKKIIRS----VEFPIELDMTPYFWLDPDAPLPPTQTR--YCLSGLVQHRGSRFGGHYIAYVRDRDG-----------WKHASDSDI 1608
            +  CL+HF A E +  A  N   C+ C+ R               K KE  A T   N+ KRLL + +PP +L+ HLKR Q + +  R     V FP+ LD+ P+     +  L   QT+  Y L G+V+H G+  GGHY+AYV+ R+G           W + SDS +
Sbjct:  998 VLSCLNHFTAIEMM--AGNNKAGCDMCTKRHN-------------KGKEKDAKTVYTNSTKRLL-ISKPPPILILHLKRFQVQMRSFRKLSCHVTFPLVLDIAPFCSKSCEKLLEKGQTQLLYSLYGVVEHSGTLHGGHYVAYVKVREGEQKPNQPREGSWYYISDSHV 1150          
BLAST of mRNA_Ecto-sp13_S_contig12495.2071.1 vs. uniprot
Match: A0A482XSJ3_LAOST (Ubiquitinyl hydrolase 1 n=1 Tax=Laodelphax striatellus TaxID=195883 RepID=A0A482XSJ3_LAOST)

HSP 1 Score: 79.0 bits (193), Expect = 2.300e-11
Identity = 54/149 (36.24%), Postives = 78/149 (52.35%), Query Frame = 1
Query: 1156 LYGCLDHFMAEERLVAADGNGYHCEGCSSREGAAXXXXXXXEGGVKAKE-GATTSLQNARKRLLMLGQPPGVLVCHLKRLQAKKKIIRS----VEFPIELDMTPYFWLDPDAPLPPTQTR--YCLSGLVQHRGSRFGGHYIAYVRDRDG 1581
            +  CL+HF A E +  A  N   C+ C+ R+              K KE  A T   N+ KRLL + +PP +L+ HLKR Q + +  R     V FP+ LD+ P+     +  L   QT+  Y L G+V+H G+  GGHY+AYV+ R+G
Sbjct:  998 VLSCLNHFTAIEMM--AGNNKAGCDMCTKRQN-------------KGKEKDAKTVYTNSTKRLL-ISKPPPILILHLKRFQVQMRSFRKLSCHVTFPLVLDIAPFCSKSCENLLEKGQTQLLYSLYGVVEHSGTLHGGHYVAYVKVREG 1130          
BLAST of mRNA_Ecto-sp13_S_contig12495.2071.1 vs. uniprot
Match: A0A1B6GCZ5_9HEMI (USP domain-containing protein (Fragment) n=1 Tax=Cuerna arida TaxID=1464854 RepID=A0A1B6GCZ5_9HEMI)

HSP 1 Score: 75.5 bits (184), Expect = 1.010e-10
Identity = 57/178 (32.02%), Postives = 84/178 (47.19%), Query Frame = 1
Query: 1123 LERRHDPDGIDLYGCLDHFMAEERLVAADGNGYHCEGCSSREGAAXXXXXXXEGGVKAKEGATTSLQNARKRLLMLGQPPGVLVCHLKRLQAKK----KIIRSVEFPIELDMTPYFWLDPDAPLPPTQTRYCLSGLVQHRGSRFGGHYIAYVRDRDG------------WKHASDSDI 1608
            L  + +     L  CL+ F   E L  A GN   C+ C+ +                 KEG T   Q + K+LL+   PP V++ HLKR Q ++    KI+R V+FP+ LD++PY  ++    L      Y L G+V+H G+  GGHY+AYV+ R              W + SDS +
Sbjct:  239 LRNKIEEGEFSLQSCLNQFTTIEML--AGGNKVGCDACTEKINKGN------------KEGKTV-YQVSTKQLLIAKLPP-VMIFHLKRFQVQRFSFRKIVRHVDFPLVLDISPYCSVNTGPIL------YSLYGVVEHMGTLHGGHYVAYVKVRSHKDQQPGCPPPGKWYYVSDSRV 394          
BLAST of mRNA_Ecto-sp13_S_contig12495.2071.1 vs. uniprot
Match: UPI001CA9C480 (ubiquitin carboxyl-terminal hydrolase 16 n=1 Tax=Leptopilina heterotoma TaxID=63436 RepID=UPI001CA9C480)

HSP 1 Score: 74.3 bits (181), Expect = 5.520e-10
Identity = 58/179 (32.40%), Postives = 89/179 (49.72%), Query Frame = 1
Query: 1150 IDLYGCLDHFMAEERLVAADGNGYHCEGCSSREGAAXXXXXXXEGGVKAKEGATTSLQNARKRLLMLGQPPGVLVCHLKRLQAKK----KIIRSVEFPIELDMTPYFWLDPDAPLPPTQTRYCLSGLVQHRGSRFGGHYIAYVRDRDGWKHASDSDIRTATLPEIKACEVSSTLQLLET 1674
              +  CL+ F A+E +  A+ N   CE C++RE              K KE        + K+ L +   P VL+ HLKR Q+ +    K+ + V+FP  L++ P    + D P       Y L G+V+H G+ +GGHY+AYV+ R   +  S  D R + LP+ ++ E S TL+  ET
Sbjct:  693 FSIQSCLNQFTAKELM--ANNNAVGCEACTAREN-------------KGKENGKMVRTPSTKQYL-ISNVPAVLILHLKRFQSHRMSFSKVTKYVKFPTVLNLAP-ICENHDVP-----KVYSLYGVVEHSGTLYGGHYVAYVKTR---QPLSPDDPRWSFLPKQESTE-SETLENNET 845          
BLAST of mRNA_Ecto-sp13_S_contig12495.2071.1 vs. uniprot
Match: A0A1B6JXY8_9HEMI (Ubiquitinyl hydrolase 1 n=3 Tax=Homalodisca TaxID=139475 RepID=A0A1B6JXY8_9HEMI)

HSP 1 Score: 73.9 bits (180), Expect = 7.710e-10
Identity = 61/183 (33.33%), Postives = 87/183 (47.54%), Query Frame = 1
Query: 1114 RKKLERRHDPDG-IDLYGCLDHFMAEERLVAADGNGYHCEGCSSREGAAXXXXXXXEGGVKAKEGATTSLQNARKRLLMLGQPPGVLVCHLKRLQAKK----KIIRSVEFPIELDMTPYFWLDPDAPLPPTQTRYCLSGLVQHRGSRFGGHYIAYVRDRDG------------WKHASDSDIR 1611
            R K+E     DG   L  CL+ F   E L  A GN   C+ C+ +                 KEG T   Q + K+LL+   PP V++ HLKR Q ++    KI+R V+FP+ LD++PY  ++    L      Y L  +V+H G+  GGHY+AYV+ R              W + SDS +R
Sbjct:  850 RNKIE-----DGEFSLKSCLNQFTTIELL--AGGNKVGCDACTEKINKGN------------KEGKTV-YQVSTKQLLIAKLPP-VMIFHLKRFQVQRFAFRKIVRHVDFPLVLDISPYCSVNTGPIL------YSLYAVVEHMGTLHGGHYVAYVKVRSHKEQQPGCPPPGKWYNISDSRVR 1005          
BLAST of mRNA_Ecto-sp13_S_contig12495.2071.1 vs. uniprot
Match: A0A0L0D5F2_THETB (Ubiquitinyl hydrolase 1 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D5F2_THETB)

HSP 1 Score: 73.9 bits (180), Expect = 8.100e-10
Identity = 54/172 (31.40%), Postives = 74/172 (43.02%), Query Frame = 1
Query: 1150 IDLYGCLDHFMAEERLVAADGNGYHCEGCSSREGAAXXXXXXXEGGVKAKEGATTSLQNARKRLLMLGQPPGVLVCHLKRLQAKK----KIIRSVEFPIELDMTPYFWL-DPDAPLPPTQTRYCLSGLVQHRGSRFGGHYIAYVRDR--DGWKHASDSDIRTATLPEIKACE 1644
            + L  CL  + A+E LV  +   YHCE C  +  +           +KA               L L + P +L  H+KR +       K+   VEFP ELD  P+    +PD         Y LSGLV HRGS  GGHY+AY R+   + W    D+ +   T   + A E
Sbjct:  526 LTLQDCLYAYCAQENLVGTER--YHCEKCDEKHDS-----------LKA---------------LALARLPEMLTIHIKRFRYDSYFGSKVTTRVEFPFELDAAPFLSRREPDVTTEAAAASYRLSGLVNHRGSMTGGHYVAYCRNAVDNEWYLFDDTRVSQVTPDAVAAAE 669          
BLAST of mRNA_Ecto-sp13_S_contig12495.2071.1 vs. uniprot
Match: UPI0012D3F45C (ubiquitin carboxyl-terminal hydrolase 16 n=1 Tax=Contarinia nasturtii TaxID=265458 RepID=UPI0012D3F45C)

HSP 1 Score: 72.8 bits (177), Expect = 1.630e-9
Identity = 62/214 (28.97%), Postives = 93/214 (43.46%), Query Frame = 1
Query: 1087 LDRLKEPSARKKLERRHD--------------PDG-IDLYGCLDHFMAEERLVAADGNGYHCEGCSSREGAAXXXXXXXEGGVKAKEGATTSLQNARKRLLMLGQPPGVLVCHLKRLQAK-----KKIIRSVEFPIELDMTPYFWLD----PDAPLPPTQTRYCLSGLVQHRGSRFGGHYIAYVRDRDGWKHASDSDIRTATLPEIKACEVSST 1656
            L   K+  A+ K +R H                DG   +  CL++F A E +     N   C+ CS R              +  K+G T +  NA K+ L +  PP VL+ HLKR Q       +K+ + V FP+ LD+  +        P+      +  Y L G+V+H GS +GGHY+AYV+ R    + +  D R   LP+    E+  T
Sbjct:  585 LGDRKDKQAKSKRKRLHSYIDWSSTIAPRYQCEDGECSVQSCLNNFTALELMTG--NNKVGCDACSER--------------INGKDGKTINT-NATKQFL-ISSPPAVLILHLKRFQVGPRCMFRKMTKHVSFPLLLDLASFCASKVKTLPNVHRYQRKLTYSLYGIVEHSGSMYGGHYVAYVKVRP---NLTPDDPRWKFLPQGSKVELDQT 777          
BLAST of mRNA_Ecto-sp13_S_contig12495.2071.1 vs. uniprot
Match: UPI00144312E6 (ubiquitin carboxyl-terminal hydrolase 16 isoform X1 n=3 Tax=Megalopta genalis TaxID=115081 RepID=UPI00144312E6)

HSP 1 Score: 71.6 bits (174), Expect = 3.800e-9
Identity = 59/183 (32.24%), Postives = 84/183 (45.90%), Query Frame = 1
Query: 1156 LYGCLDHFMAEERLVAADGNGYHCEGCSSREGAAXXXXXXXEGGVKAKEGATTSLQNARKRLLMLGQPPGVLVCHLKRLQAKK----KIIRSVEFPIELDMTPYFWLDPDAPLPPTQTRYCLSGLVQHRGSRFGGHYIAYVRDRDGWKHASDSDIRTATLPEIKACEVSSTLQLLETVGESGV 1692
            +  CL+ F A E +  +  N   CE C++RE              K KE        + K+ L + + P VL+ HLKR QA++    K+ R V F   LD++P         L      Y L G+V+HRG+  GGHY+AYV+ R     ASD D R + LP     E     +  ++  E GV
Sbjct:  708 IMSCLNQFTALELMRGS--NKVSCEACTARE-------------RKVKENCKMICTPSTKQYL-ISRVPAVLILHLKRFQAQRIDFRKVTREVSFQTTLDLSPICKNHKKPKL------YSLYGVVEHRGTIHGGHYVAYVKSR--MPLASD-DPRWSFLPTNDTQETEENSESEDSASEDGV 865          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12495.2071.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRB3_ECTSI0.000e+073.30Ubiquitin carboxyl-terminal hydrolase 2 n=1 Tax=Ec... [more]
A0A6H5JSL1_9PHAE3.400e-31671.13USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
UPI00193CA1651.010e-1134.32ubiquitin carboxyl-terminal hydrolase 16 n=1 Tax=N... [more]
A0A482XSJ3_LAOST2.300e-1136.24Ubiquitinyl hydrolase 1 n=1 Tax=Laodelphax striate... [more]
A0A1B6GCZ5_9HEMI1.010e-1032.02USP domain-containing protein (Fragment) n=1 Tax=C... [more]
UPI001CA9C4805.520e-1032.40ubiquitin carboxyl-terminal hydrolase 16 n=1 Tax=L... [more]
A0A1B6JXY8_9HEMI7.710e-1033.33Ubiquitinyl hydrolase 1 n=3 Tax=Homalodisca TaxID=... [more]
A0A0L0D5F2_THETB8.100e-1031.40Ubiquitinyl hydrolase 1 n=1 Tax=Thecamonas trahens... [more]
UPI0012D3F45C1.630e-928.97ubiquitin carboxyl-terminal hydrolase 16 n=1 Tax=C... [more]
UPI00144312E63.800e-932.24ubiquitin carboxyl-terminal hydrolase 16 isoform X... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12495contigEcto-sp13_S_contig12495:2..3080 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score971.5
Seed ortholog evalue2.1e-280
Seed eggNOG ortholog2880.D7FRB3
Preferred nameUBP2
Model size2100
KEGG koko:K11844,ko:K11848
Hectar predicted targeting categoryother localisation
GOsGO:0000502,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009507,GO:0009536,GO:0009987,GO:0019538,GO:0019941,GO:0030163,GO:0032991,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051603,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368,GO:1905369
Exons3
EggNOG free text desc.histone H2A K63-linked deubiquitination
EggNOG OGsCOG5560@1,KOG1873@2759
Ec32 ortholog descriptionPeptidase C19, ubiquitin carboxyl-terminal hydrolase
Ec32 orthologEc-26_002510.1
EC3.4.19.12
Cds size2100
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462666.173246-CDS-Ecto-sp13_S_contig12495:1..14741681462666.173246-CDS-Ecto-sp13_S_contig12495:1..1474Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12495 2..1474 +
1681462666.1869407-CDS-Ecto-sp13_S_contig12495:1755..19451681462666.1869407-CDS-Ecto-sp13_S_contig12495:1755..1945Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12495 1756..1945 +
1681462666.1948938-CDS-Ecto-sp13_S_contig12495:2643..30801681462666.1948938-CDS-Ecto-sp13_S_contig12495:2643..3080Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12495 2644..3080 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12495.2071.1prot_Ecto-sp13_S_contig12495.2071.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12495 2..3080 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12495.2071.1

>prot_Ecto-sp13_S_contig12495.2071.1 ID=prot_Ecto-sp13_S_contig12495.2071.1|Name=mRNA_Ecto-sp13_S_contig12495.2071.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=700bp
PRHEEGETADRGGEVVDAITSTAAGSDEGSPADGIDVEAVVTAEKPRGQE
EGQEAAVVLDGTHTSGSDSGDGDGSAGNTGLALMTPKPTDSAVSGAESLG
SSGHESRNGVTSTPHSTSRAAGVCERVDCNGGSVDAGSPPPPSPTCEDSF
ARIASHGQAGQGTRAEAGTASCGQEQQAAEMGLRDRFEADGNLDGAGTFS
SSSSLGGCTTGDTQGSTDVCEDGRSAFGSECSEGNGNDKKHEESAAAPTN
ALSTCLDGPDVLGSEAQRKRQRTNSRAPDSTTACLVGGDGSVEGKAVGVE
RGRESQSAGGGAVADENGGDKHADSSHANGDRCGGEEEPSSVAVSPASAS
PPGAAAAVPRNPLDRLKEPSARKKLERRHDPDGIDLYGCLDHFMAEERLV
AADGNGYHCEGCSSREGAAAAAAAGGEGGVKAKEGATTSLQNARKRLLML
GQPPGVLVCHLKRLQAKKKIIRSVEFPIELDMTPYFWLDPDAPLPPTQTR
YCLSGLVQHRGSRFGGHYIAYVRDRDGWKHASDSDIRTATLPEIKACEVS
STLQLLETVGESGVQTIDEADEDAKEAGVDVLDDMDKNEGEPGGQAIDEL
EGETAAVPVGACERQGGGGYTDPSGEGKRERKDTSVTSVAEKSNEVAVAA
SAAAAAAAVDEKGGSSGASTGEQDQEQKAEPVASSEGWSEAEASGDVQV*
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mRNA from alignment at Ecto-sp13_S_contig12495:2..3080+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12495.2071.1 ID=mRNA_Ecto-sp13_S_contig12495.2071.1|Name=mRNA_Ecto-sp13_S_contig12495.2071.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3079bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12495:2..3080+ (Ectocarpus species13 EcNAP12_S_4_19m)
CCGCGGCACGAAGAGGGCGAGACCGCTGATCGGGGCGGAGAGGTTGTCGA TGCGATCACTTCGACGGCAGCGGGCTCCGACGAAGGGTCTCCTGCGGATG GGATAGATGTGGAGGCTGTGGTGACTGCAGAAAAACCGAGAGGCCAAGAA GAAGGTCAAGAGGCGGCGGTGGTATTGGATGGGACACACACAAGTGGCAG CGATAGCGGAGACGGTGATGGCAGCGCAGGAAACACGGGTCTCGCTTTGA TGACGCCGAAACCGACGGACTCGGCTGTCTCTGGTGCGGAAAGCTTGGGG TCCTCGGGTCACGAGAGTCGGAACGGTGTCACTTCCACACCGCATTCGAC AAGTCGAGCCGCGGGTGTTTGCGAGCGAGTTGATTGCAACGGGGGAAGCG TTGACGCCGGCTCGCCGCCGCCGCCGTCGCCGACTTGTGAAGACTCGTTC GCCAGAATCGCTAGCCACGGACAAGCTGGGCAAGGGACCAGAGCAGAAGC TGGGACCGCTAGCTGTGGGCAAGAGCAACAAGCGGCGGAGATGGGGCTTC GAGATCGATTCGAAGCGGACGGCAACCTGGACGGTGCGGGAACTTTCAGC TCGTCAAGCAGCCTTGGCGGTTGCACAACCGGCGACACACAAGGAAGCAC CGACGTTTGCGAGGACGGCCGGAGCGCCTTTGGCAGCGAGTGCAGCGAAG GAAACGGAAATGACAAGAAGCACGAAGAGAGCGCAGCGGCTCCTACCAAC GCGTTGTCCACGTGTCTCGATGGCCCGGACGTGTTGGGGTCGGAGGCACA GAGGAAACGTCAGCGTACAAACTCGCGGGCTCCAGACTCGACAACGGCTT GTCTCGTGGGGGGCGACGGGTCGGTAGAGGGTAAAGCAGTTGGTGTGGAA CGCGGCCGGGAGTCGCAGTCAGCTGGCGGCGGTGCTGTTGCGGACGAGAA CGGCGGAGACAAGCACGCGGACAGCAGCCACGCCAACGGAGATCGTTGTG GAGGCGAGGAAGAACCCAGCAGCGTCGCTGTCTCTCCTGCCAGCGCATCA CCCCCCGGTGCCGCCGCCGCGGTCCCGCGGAATCCTCTCGACCGCCTCAA GGAGCCGTCGGCACGAAAGAAGCTAGAAAGGAGACACGATCCCGATGGGA TCGATCTCTACGGGTGCCTGGATCACTTCATGGCGGAGGAGAGGTTGGTC GCGGCGGACGGTAACGGTTACCACTGTGAGGGCTGCAGTTCTCGCGAAGG TGCGGCGGCGGCGGCGGCGGCCGGCGGCGAGGGTGGCGTGAAGGCGAAGG AGGGAGCGACTACGAGCCTCCAGAACGCCCGCAAGCGTCTCCTGATGCTC GGCCAGCCGCCCGGAGTGTTGGTGTGCCATCTCAAGCGCCTTCAGGCGAA GAAGAAAATCATAAGGAGCGTCGAGTTCCCCATCGAGCTAGACATGACCC CGTACTTCTGGCTCGACCCCGATGTGCGTGCCTAGATTTTGGACTGTGGG GGTGGCCGAAATGGCTTCATTGTGGAATGCGAAGTATTGCATGCGATTCC GCACCAAGCATGCTTCCTCACAGAAGAGTTGACATGGGGGCGCTTTTTGG TGCTGCGTTTACTGTCGTTAATTTCTTGCGAATTTTGTTGCAGATGAAGT ACTTTGTGAAGCGTGCTGGTCACACCATATCGCTGCCGCGTCTCATCCGT CGTAGTAGCTGCTCTTTTCTCTGACTGTTTCTCCGCCCCGGTACAATTTC GCAGGCACCGCTCCCTCCGACTCAAACACGGTACTGCCTGAGCGGTCTCG TTCAACACCGCGGCAGCCGATTCGGCGGACACTACATCGCCTACGTCCGG GATCGCGACGGCTGGAAGCACGCAAGCGACAGTGACATCAGAACGGCAAC TCTCCCAGAAATCAAGGCTTGCGAAGTAAGCAGTACCTTGCAGTGTAGGT ATTGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAAAGTGCTAGAA ACGGTGGGGGAATCTGGTGTACAAACCATAGACGAGGCGGACGAAGATGC GAAAGAAGCCGGTGTAGATGTGCTAGACGACATGGACAAAAATGAGGGGG AACCTGGTGGACAAGCGATCGACGAGTTGGAGGGCGAAACAGCGGCTGTT CCCGTAGGCGCGTGCGAGCGTCAGGGGGGAGGTGGGTACACTGACCCTTC AGGAGAGGGGAAGAGGGAGCGAAAGGATACGAGTGTCACTTCTGTTGCTG AGAAGAGCAACGAGGTAGCCGTTGCCGCCAGCGCAGCTGCTGCTGCTGCT GCAGTAGACGAGAAGGGTGGAAGTTCCGGCGCCTCCACTGGTGAGCAGGA CCAAGAGCAAAAGGCGGAGCCTGTGGCTAGTTCCGAGGGATGGAGTGAGG CAGAGGCGAGCGGGGACGTTCAAGTTTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12495:2..3080+

>mRNA_Ecto-sp13_S_contig12495.2071.1 ID=mRNA_Ecto-sp13_S_contig12495.2071.1|Name=mRNA_Ecto-sp13_S_contig12495.2071.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2100bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12495:2..3080+ (Ectocarpus species13 EcNAP12_S_4_19m)
CCGCGGCACGAAGAGGGCGAGACCGCTGATCGGGGCGGAGAGGTTGTCGA
TGCGATCACTTCGACGGCAGCGGGCTCCGACGAAGGGTCTCCTGCGGATG
GGATAGATGTGGAGGCTGTGGTGACTGCAGAAAAACCGAGAGGCCAAGAA
GAAGGTCAAGAGGCGGCGGTGGTATTGGATGGGACACACACAAGTGGCAG
CGATAGCGGAGACGGTGATGGCAGCGCAGGAAACACGGGTCTCGCTTTGA
TGACGCCGAAACCGACGGACTCGGCTGTCTCTGGTGCGGAAAGCTTGGGG
TCCTCGGGTCACGAGAGTCGGAACGGTGTCACTTCCACACCGCATTCGAC
AAGTCGAGCCGCGGGTGTTTGCGAGCGAGTTGATTGCAACGGGGGAAGCG
TTGACGCCGGCTCGCCGCCGCCGCCGTCGCCGACTTGTGAAGACTCGTTC
GCCAGAATCGCTAGCCACGGACAAGCTGGGCAAGGGACCAGAGCAGAAGC
TGGGACCGCTAGCTGTGGGCAAGAGCAACAAGCGGCGGAGATGGGGCTTC
GAGATCGATTCGAAGCGGACGGCAACCTGGACGGTGCGGGAACTTTCAGC
TCGTCAAGCAGCCTTGGCGGTTGCACAACCGGCGACACACAAGGAAGCAC
CGACGTTTGCGAGGACGGCCGGAGCGCCTTTGGCAGCGAGTGCAGCGAAG
GAAACGGAAATGACAAGAAGCACGAAGAGAGCGCAGCGGCTCCTACCAAC
GCGTTGTCCACGTGTCTCGATGGCCCGGACGTGTTGGGGTCGGAGGCACA
GAGGAAACGTCAGCGTACAAACTCGCGGGCTCCAGACTCGACAACGGCTT
GTCTCGTGGGGGGCGACGGGTCGGTAGAGGGTAAAGCAGTTGGTGTGGAA
CGCGGCCGGGAGTCGCAGTCAGCTGGCGGCGGTGCTGTTGCGGACGAGAA
CGGCGGAGACAAGCACGCGGACAGCAGCCACGCCAACGGAGATCGTTGTG
GAGGCGAGGAAGAACCCAGCAGCGTCGCTGTCTCTCCTGCCAGCGCATCA
CCCCCCGGTGCCGCCGCCGCGGTCCCGCGGAATCCTCTCGACCGCCTCAA
GGAGCCGTCGGCACGAAAGAAGCTAGAAAGGAGACACGATCCCGATGGGA
TCGATCTCTACGGGTGCCTGGATCACTTCATGGCGGAGGAGAGGTTGGTC
GCGGCGGACGGTAACGGTTACCACTGTGAGGGCTGCAGTTCTCGCGAAGG
TGCGGCGGCGGCGGCGGCGGCCGGCGGCGAGGGTGGCGTGAAGGCGAAGG
AGGGAGCGACTACGAGCCTCCAGAACGCCCGCAAGCGTCTCCTGATGCTC
GGCCAGCCGCCCGGAGTGTTGGTGTGCCATCTCAAGCGCCTTCAGGCGAA
GAAGAAAATCATAAGGAGCGTCGAGTTCCCCATCGAGCTAGACATGACCC
CGTACTTCTGGCTCGACCCCGATGCACCGCTCCCTCCGACTCAAACACGG
TACTGCCTGAGCGGTCTCGTTCAACACCGCGGCAGCCGATTCGGCGGACA
CTACATCGCCTACGTCCGGGATCGCGACGGCTGGAAGCACGCAAGCGACA
GTGACATCAGAACGGCAACTCTCCCAGAAATCAAGGCTTGCGAAGTAAGC
AGTACCTTGCAGTTGCTAGAAACGGTGGGGGAATCTGGTGTACAAACCAT
AGACGAGGCGGACGAAGATGCGAAAGAAGCCGGTGTAGATGTGCTAGACG
ACATGGACAAAAATGAGGGGGAACCTGGTGGACAAGCGATCGACGAGTTG
GAGGGCGAAACAGCGGCTGTTCCCGTAGGCGCGTGCGAGCGTCAGGGGGG
AGGTGGGTACACTGACCCTTCAGGAGAGGGGAAGAGGGAGCGAAAGGATA
CGAGTGTCACTTCTGTTGCTGAGAAGAGCAACGAGGTAGCCGTTGCCGCC
AGCGCAGCTGCTGCTGCTGCTGCAGTAGACGAGAAGGGTGGAAGTTCCGG
CGCCTCCACTGGTGAGCAGGACCAAGAGCAAAAGGCGGAGCCTGTGGCTA
GTTCCGAGGGATGGAGTGAGGCAGAGGCGAGCGGGGACGTTCAAGTTTAG
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