mRNA_Ecto-sp13_S_contig914.20707.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig914.20707.1
Unique NamemRNA_Ecto-sp13_S_contig914.20707.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig914.20707.1 vs. uniprot
Match: A0A6H5KI77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI77_9PHAE)

HSP 1 Score: 819 bits (2116), Expect = 2.170e-281
Identity = 415/480 (86.46%), Postives = 428/480 (89.17%), Query Frame = 1
Query:  769 TRFIATKLITNVGFFDVNDTYVAHAILQETLFIHGSTASGGSVANPTPKATPVRFTSTCTDACSSVHSPGLPAGMSTVCDESCFSGWSPAGPRFRGHNCGAGDPSLYGSTCRSCYTDEEVALAADRSLGNASSDPFLAGAHVIMCDTGEPPQASSCSPACRSMADTVCDSRCGTGLYGDFNCDWLGLGLTCRQCFQETSVAQFADSIAKTRGQRVILCATHEPPLSAGSLKSHVEEKLGHGGGG-GDANASTTFPLESDRSNRSTAVFVGSTTINEMCVFLRGYFDLLAETRLSVLSVLEFMPGMRVAVATHPRDFQVFNRTLGYLPDVAIGNASSVEHSALIADKMCGNGTRLIYYMNVGEVLSRTFTRKDTHGVLKDLIVSSTDSAQVPFEHARRAAGSAVLLGFTTPAFTYGTDLILPAETNEQLRAVLHTKEKLNELVVVQAQGKHRRSRRKLGFMFEYLASVAHSHRGSATIYIP 2205
            T       ITNVGFFDVNDTYVA AILQETLFIHGSTASGG VANPTPKATP RF+ TCTDACSSVHSPG                      RFRGHNCGAGDPSLYGSTCRSCYTDEE ALAADRSLGNASSDP LAGAHVIMCDTGEPPQASSCSPACRSMADTVCDSRCGTGLYGD+NCDWLGLGLTCR+CFQETSVA+FADSIAKTRGQRVILCATHEPPLS GSLKSH++ KLGHGGG  GDANA TTFPLESD S+RSTAV+VGS TI +MCVFLRGYFDLLAETRLSV SVLEFMPGMRVAVATHPRDFQVFNRTLGYLPDV I NAS VEH ALIAD++CGNGTRLIYYMNVGEVLSRTFTRKDTHGVL DLIVS+TDSAQVP EHARRAAGSAVLLGFTTPAFTYGTDLILPAETNEQLRAVLHTK KLNELVVVQAQGKHRRSR+KLGFMFEYLASVAHSHR SATIYIP
Sbjct:   33 TALYTISQITNVGFFDVNDTYVADAILQETLFIHGSTASGGRVANPTPKATPARFSRTCTDACSSVHSPGSXXXXXXXXXXXXXXXXXXXXXRFRGHNCGAGDPSLYGSTCRSCYTDEEEALAADRSLGNASSDPLLAGAHVIMCDTGEPPQASSCSPACRSMADTVCDSRCGTGLYGDYNCDWLGLGLTCRRCFQETSVAEFADSIAKTRGQRVILCATHEPPLSVGSLKSHIKAKLGHGGGXXGDANAPTTFPLESDTSDRSTAVYVGSATIKQMCVFLRGYFDLLAETRLSVSSVLEFMPGMRVAVATHPRDFQVFNRTLGYLPDVTIENASRVEHGALIADQICGNGTRLIYYMNVGEVLSRTFTRKDTHGVLGDLIVSATDSAQVPLEHARRAAGSAVLLGFTTPAFTYGTDLILPAETNEQLRAVLHTKAKLNELVVVQAQGKHRRSRKKLGFMFEYLASVAHSHRSSATIYIP 512          
BLAST of mRNA_Ecto-sp13_S_contig914.20707.1 vs. uniprot
Match: D7FKL9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKL9_ECTSI)

HSP 1 Score: 546 bits (1406), Expect = 3.500e-179
Identity = 315/752 (41.89%), Postives = 402/752 (53.46%), Query Frame = 1
Query:   13 LLSAIGSCFCTLAVWMLCPNLLSRWSRTYYPAQDWHGHVMAVVVPVYDGDINDAMISLSKWPTTCSENTRKGMDLVIYKAEAVGNADTLPRIPRQASACFRRTKVVGGGLLPEENVYPTGASVMFYKMFLDSDVAHALDEYDALAIIEWDVLVAHHTSFSRLYETAFCSEPFWVKGSTLAGTEFHQTATVRDMWHILGHLNGNAIYNNTDPAFTQFVNYTLTRWGYSYSYDVALWATISDFPYSWLLWQRYSTRFIATKLITNVGFFDVNDTYVAHAILQETLFIHGSTASGGSVAN-------PTPKATPVRFTSTCTDACSSVHSPGLPAGMSTVCDESCFSGWSPAGPRFRGHNCGAGDPSLYGSTCRSCYTDEEVALAADRSLGNASSDPFLAGAHVIMCDTGEPPQASSCSPACRSMADTVCDSRCGTGLYGDFNCDWLGLGLTCRQCFQETSVAQFADSIAKTRGQRVILCATHEPPLSAGSLKSHVEEKLGHGGGGGDANASTTFPLESDRSNR------------STAVFVGSTTINEMCVFLRGYFDLLAETRLSVLSVLEFMPGMRVAVATHPRDFQVFNRTLGYLPDVAIGNASSVEHSALIADKMCGNGTRLIYYMNVGEVLSRTFTRKDTHGVLKDLIVSSTDSAQVPFEHARRAAGSAVLLGFTTPAFTYGTDLILPAETNEQLRAVLHTKEKLNELVVVQAQGKHRRSRRKLGFMFEYLASVAHSHRGSATIYIPEV 2211
            LL+A  +C+    V  +     +   ++ Y  +     ++AVVVPVYDGD  DAM +LSKWP TC +NT  GMDLVIYKAE + +AD LP++P QAS CFR+TK++   LLPE                                                                                                                                                   ITNVG FDV+D +VA A+ QETLFIHGS+ S GS+A+       P    +    +  CT AC S  S  +  G+ST CDESC +GWSPAGPR  GH+CGAGDPS +G TCR CYTDEE+AL AD  L +AS++P     HV+MCDT +PP ASSC+ AC+  +DTVCD RCG+G YGDFNCDW GLG TCR CF E   A  AD  AK  G RV++C THEPP   GS  +  EE+ GHG        +   P   +R+N+            +   ++G+TT   +C F+RGY  LL   ++SV SVL+FMPGMR+ + THPR+F+ FNRT G+LP+V +G +++VEH  L+AD +CG GTRLIYYM+ GE+LSRTFT+KDTH V  DLIVS  ++ +VP   A R  GS+VLLG TTP FT+G+DLILPAETN QLRAVL   +KL    V +   KH  S R +  ++EYLA VA +H+ SA I IPEV
Sbjct:   10 LLAAAAACYALGVVVAVVRAWRAGGVKSIYSGRASRDKLLAVVVPVYDGDQEDAMRALSKWPETCHDNTLYGMDLVIYKAEDLADADNLPQVPHQASRCFRQTKIIDARLLPE---------------------------------------------------------------------------------------------------------------------------------------------------ITNVGHFDVSDQHVAQAVAQETLFIHGSSQSEGSLAHSINHFGRPMGALSIDGNSLDCTSACGSALSGKIGTGVSTFCDESCATGWSPAGPRLGGHDCGAGDPSQFGGTCRLCYTDEELALVADHKLASASANPSKPDMHVVMCDTTQPPPASSCTTACQDASDTVCDYRCGSGRYGDFNCDWRGLGSTCRLCFNELPAAHLADEFAKAHGGRVVMCNTHEPPPPIGSYTNDKEEENGHGSADAGNGPTLVAPAPQERNNKEIVSGDEESQGPAATEYIGTTTRGHICAFMRGYSRLLPMMKVSVSSVLQFMPGMRIGITTHPREFEEFNRTFGHLPNVTVGTSTNVEHGPLVADYICGEGTRLIYYMDAGEMLSRTFTKKDTHTVTGDLIVSLVNTDEVPQPTAARGMGSSVLLGVTTPTFTHGSDLILPAETNAQLRAVLEGNQKL----VARTDAKHGHSDR-VERIYEYLADVASTHKDSAIINIPEV 609          
BLAST of mRNA_Ecto-sp13_S_contig914.20707.1 vs. uniprot
Match: D7FRS3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRS3_ECTSI)

HSP 1 Score: 521 bits (1342), Expect = 8.360e-170
Identity = 279/485 (57.53%), Postives = 336/485 (69.28%), Query Frame = 1
Query:  793 ITNVGFFDVNDTYVAHAILQETLFIHGSTASGGSVA-NPTPKATPVRF-TSTCTDACSSVHSPGLPAGMSTVCDESCFSGWSPAGPRFRGHNCGAGDPSLYGSTCRSCYTDEEVALAADRSLGNASSDPFLAGAHVIMCDTGEPPQASSCSPACRSMADTVCDSRCGTGLYGDFNCDWLGLGLTCRQCFQETSVAQFADSIAKTRGQRVILCATHEPPLSAGSLKSHVEEKLGHGGGG-GDANASTTFPLES--------DRSNRSTAV-FVGSTTINEMCVFLRGYFDLLAETRLSVLSVLEFMPGMRVAVATHPRDFQVFNRTLGYLPDVAIGNASSVEHSALIADKMCGNGTRLIYYMNVGEVLSRTFTRKDTHGVLKDLIVSSTDSAQVPFEHARRAAGSAVLLGFTTPAFTYGTDLILPAETNEQLRAVLHTKEKLNELVVVQAQGKHRRSRRKLGFMFEYLASVAHSHRGSATIYIPEV 2211
            I+NVGFFDV+D +VA AI QETLFIHGS+ SGGS A +  PKA+     T +CT AC S HS  +  G ST CDESC +GWSPAGPR  GHNCGAGDPS YGSTCR CYT+E+ ALAADR+L + S+DP    AHV+MCDT +PPQAS C+ AC+ MADTVCD RCG+G YGDFNC+W G+  TCR CF ETSVA  AD +AK  G RV++C THEPPL  GS      E  GH     GD   S     ES        D SN   A  ++G+TT   +C F+RG+ +LL ET++SV SVLE MPGMRVA+AT    FQ F R   +LPDVAI  + SV H ALIAD++CG GTRLIYY+  G+V+SRTFT KDTH VL +LIVS  ++ +VP  +ARRA GS VLLG TTP FT+G+DLILPAETN QLRAVL      N+ +V Q   +   + R+   ++EYLA VA  HRGSA+IY+PEV
Sbjct:   42 ISNVGFFDVSDKHVAQAISQETLFIHGSSHSGGSAAISSPPKASASDINTLSCTGACGSEHSAQVRTGASTFCDESCSTGWSPAGPRLGGHNCGAGDPSQYGSTCRLCYTNEDEALAADRTLASLSTDPSTPDAHVVMCDTTQPPQASRCTTACQDMADTVCDYRCGSGRYGDFNCNWRGVDSTCRLCFHETSVALLADEVAKAHGGRVVMCNTHEPPLPIGSKTKATVEDTGHRSADTGDGLPSAVSSQESKRKLLAVADESNDPAATAYIGTTTRGHICAFMRGFVELLPETKVSVSSVLELMPGMRVAIATDAAGFQEFARAFAHLPDVAIELSKSVSHGALIADEVCGKGTRLIYYIEAGQVVSRTFTEKDTHTVLGNLIVSLANADEVPPVYARRALGSTVLLGVTTPTFTHGSDLILPAETNAQLRAVLGA----NQRLVAQTNAEDGDTGRQTERVYEYLADVAKMHRGSASIYVPEV 522          
BLAST of mRNA_Ecto-sp13_S_contig914.20707.1 vs. uniprot
Match: A0A6H5KZV7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZV7_9PHAE)

HSP 1 Score: 527 bits (1357), Expect = 9.290e-168
Identity = 308/747 (41.23%), Postives = 400/747 (53.55%), Query Frame = 1
Query:  130 MAVVVPVYDGDINDAMISLSKWPTTCSENTRKGMDLVIYKAEAVGN--ADTLPRIPRQASACFRRTKVVGGGLLPEENVYPTGASVMFYKMFLDSDVAHALDEYDALAIIEWDVLVAHHTSFSRLYETAFCS-EPFWVKGSTLAGTEFHQTATVRDMWHILGHLNGNAIYNNTDPAFTQFVNYTLTRWGYSYSYDVALWATISDFPYSWLLWQRYSTRFIATKLITNVGFFDVNDTYVAHAILQETLFIHGS-TASGGSVANPT----PKATPVRFTST------CTDACSSVHSP--GLPAG-MSTVCDESCFSGWSPAGPRFRGHNCGAGDPSLYGSTCRSCYTDEEVALAADRSLGN-------------------------ASSDPFLAGAHVIMCDTGEP---------------------------------------------PQASSCSPACRSMADTVCDSRCGTGLYGDFNCDWLGLGLTCRQCFQETSVAQFADSIAKTRGQRVILCATHEPPLSAGSLKSHVEEKLGHGGGGGDANASTTFPLESDRS---------------NRSTAVFVGSTTINEMCVFLRGYFDLLAETRLSVLSVLEFMPGMRVAVATHPRDFQVFNRTLGYLPDVAIGNA-SSVEHSALIADKMCGNGTRLIYYMNVGEVLSRTFTRKDTHGVLKDLIVSSTDSAQVPFEHARRAAGSAVLLGFTTPAFTYGTDLILPAETNEQLRAVL 2061
            +AVVVP + GD+  A+ SL+ WPTTC  +T     L++Y A    +  A  LP + +    CF  T++V   L  EENVYP G SV FYK++LDS+V   L EYDALAIIEWDV+VAH TSF +LY  AF   EPFW+KGSTL G  FH+T  + +  H+LGH+NGNAIYNNTDPAF +FVNYTLTRW Y+ SYDVALWATISDFPYSW LWQR+S +F+A  LI NVGF D++   V  A+   TLFIHGS T  GGS+ + +      +  +RF         CT +C     P  G+ AG ++TVCD SC+SG    G RF G+ CGAGD   YGS CR+C+TD E A AA+  L                           A   P  A   V   + G+                                                A+ CS  C+   DTVCD  CGTG YGD+NC W G G  CR CF +   A  A+++AK RG  VI+C T EPP                                                   + +   ++   T  ++C F+ G+   L ET ++V S+++FMPGMRVA+AT   D  VF R+LG LP V I  A S +  + L+AD+ CG GT+L++YMN GE+LSR FT KDTH    DL+V   +  +V    ARRA  +  +LGF++P+F++G D++LP  TN QLR +L
Sbjct:  124 LAVVVPAHAGDLGKALTSLATWPTTCHSSTLVNAHLILYYAGGEDDDVAAVLPALAQTGGRCFANTRLVLANLSQEENVYPKGPSVQFYKLYLDSNVRRQLIEYDALAIIEWDVIVAHDTSFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATISDFPYSWPLWQRFSRKFVAIDLIANVGFQDMDQQAVLKAVASNTLFIHGSLTGGGGSMFHASGAKADSSPALRFLGKNRPGERCTASCGGGAPPSSGVGAGALATVCDRSCYSGGE-LGARFGGYLCGAGDIKEYGSHCRTCFTDMEEAQAAEEQLAEEEQAAMRGRSFKMPVDNEKSRRVLRADDGPEGAAGWVEGGEGGDSRAVLRGNRGGGAGVTRRMDAVDGGTDDEMVEXXXXXXXXXXXXXXXPATGCSNKCQMKTDTVCDRSCGTGRYGDYNCGWRGYGSDCRFCFNDREEALTANAVAKRRGGSVIMCHTFEPPTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTPYDPANEPYLKDITRGQICAFMTGFSSFLKETEVTVKSIVQFMPGMRVAIATQDHDVSVFKRSLGNLPGVVISEAISPITLAPLLADRHCGKGTKLVFYMNPGELLSRKFTSKDTHSAAGDLLVVYAEVGRVGEASARRALATMSVLGFSSPSFSFGMDIMLPVHTNGQLRELL 869          
BLAST of mRNA_Ecto-sp13_S_contig914.20707.1 vs. uniprot
Match: D8LCC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC7_ECTSI)

HSP 1 Score: 506 bits (1304), Expect = 1.070e-162
Identity = 284/651 (43.63%), Postives = 366/651 (56.22%), Query Frame = 1
Query:  343 LPEENVYPTGASVMFYKMFLDSDVAHALDEYDALAIIEWDVLVAHHTSFSRLYETAF-CSEPFWVKGSTLAGTEFHQTATVRDMWHILGHLNGNAIYNNTDPAFTQFVNYTLTRWGYSYSYDVALWATISDFPYSWLLWQRYSTRFIATKLITNVGFFDVNDTYVAHAILQETLFIHGSTASGG--------------SVANPTPKATPVRF-----------------------TSTCTDACSSVHSPGLPAG-----------MSTVCDESCFSGWSP--AGPRFRGHNCGAGDPSLYGSTCRSCYTDEEVALAADRSLGNASSDPFLAGAH-VIMCDTGEPPQASSCSPACRSMADTVCDSRCGTGLYGDFNCDWLGLGLTCRQCFQETSVAQFADSIAKTRGQRVILCATHEPP--LSAGSLKSHVEEKLGHGGGGGDANASTTFPLESDRSNRSTAVFVGSTTIN-----------------------EMCVFLRGYFDLLAETRLSVLSVLEFMPGMRVAVATHPRDFQVFNRTLGYLPDVAIGNASSVE-HSALIADKMCGNGTRLIYYMNVGEVLSRTFTRKDTHGVLKDLIVSSTDSAQVPFEHARRAAGSAVLLGFTTPAFTYGTDLILPAETNEQLRAVL 2061
            +P+ENVYP G SV FYK+FL+  +   L+ + A+A+IEWDVLVAH  SF +LY  AF   EPFWVKGS LAGT FH T T+ D WH+LGH+NGNAIYNN+DPAF  FV +TL RWGYSYSYDVALWAT+SDFPYSW LWQR+S++F++T LI NVGF DV+   V +A+  ET+FIHGS   GG              + A  +     +R                        T  C   C S  S  L  G           M+TVCD +  S  +   A  +    +CGAGD   +G  CR CY D E AL ADR L N + +      H VIMCDT  PP+AS+CS  C +  DT+CD RC +GL+G++NC+W   G  CR CF +T+ A  AD  AK  G RVI+C THEPP  L+   L +  +E++ H      +  +     E   SN       G  T                         EMC F   Y+  L ET  SV S+  F+PGMRV +A     F VFNRTLG  PDV + NA++   H++L+AD  CG GT+LI Y+  G+V+SR F++KDTHG   +L+V  T+  ++   H +R   +  LLGF  P+F++GTDL LPA  N +LR VL
Sbjct:   26 VPQENVYPKGPSVQFYKLFLEDTIKEKLERFGAIAVIEWDVLVAHDKSFEKLYVAAFDVVEPFWVKGSILAGTNFHGTVTITDNWHMLGHINGNAIYNNSDPAFADFVEFTLARWGYSYSYDVALWATVSDFPYSWPLWQRFSSKFVSTNLIANVGFLDVDQETVGNALASETMFIHGSLTGGGGTQFASGATAEKGGNAAAASEGGNSLRIMASLEANAAGEDVGGGGPSTRLATPECRTECGSTVSWDLLGGXXXXXXDGVMDMATVCDHATCSAATAGSADGKPGAWSCGAGDEERFGKHCRPCYFDAEEALKADRVLQNQTREASEEQPHHVIMCDTLRPPEASTCSLKCATKKDTICDDRCKSGLFGNYNCNWRDHGEHCRFCFDDTAAAIVADKAAKRTGGRVIMCNTHEPPVELTQAELDALEKERIEHVMEAAASKMANAAKQEKKTSNTKGHANPGGKTAGDEGEPDAPVHPAMIEYSKDLLRGEMCAFATAYYLYLRETEASVRSLAHFLPGMRVRLAVDTIHFSVFNRTLGGYPDVEVVNATTTGGHASLLADVHCGEGTKLILYLGPGDVVSRPFSKKDTHGTRGELLVPYTEPERLDEYHIKRTQATTSLLGFDAPSFSFGTDLFLPAWVNRELRRVL 676          
BLAST of mRNA_Ecto-sp13_S_contig914.20707.1 vs. uniprot
Match: A0A6H5JKY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKY0_9PHAE)

HSP 1 Score: 474 bits (1219), Expect = 3.330e-150
Identity = 285/691 (41.24%), Postives = 360/691 (52.10%), Query Frame = 1
Query:  346 PEENVYPTGASVMFYKMFLDSDVAHALDEYDALAIIEWDVLVAHHTSFSRLYETAF-CSEPFWVKGSTLAGTEFHQTATVRDMWHILGHLNGNAIYNNTDPAFTQFVNYTLTRWGYSYSYDVALWATISDFPYSWLLWQRYSTRFIATKLITNVGFFDVNDTYVAHAILQETLFIHGSTASGG--------------SVANPTPKATPVRF-----------------------TSTCTDACSSVHSPGLPAG---------MSTVCDESCFSGWSP--AGPRFRGHNCGAGDPSLYGSTCRSCYTDEEVALAADRSLGNASSDPF-LAGAHVIMCDTGEPPQASSCSPACRSMADT------------------------VCDSRCGTGLYGDFNCDWLGLGLT--------------CRQCFQETSVAQFADSIAKTRGQRVILCATHEPPLSAGSLKSHVEEKL---------------------------GHGGGGGDA---NASTTFPLESDRSNRSTAVFVGSTTINEMCVFLRGYFDLLAETRLSVLSVLEFMPGMRVAVATHPRDFQVFNRTLGYLPDVAIGNASSVE-HSALIADKMCGNGTRLIYYMNVGEVLSRTFTRKDTHGVLKDLIVSSTDSAQVPFEHARRAAGSAVLLGFTTPAFTYGTDLILPAETNEQLRAVL 2061
            P+ENVYP G SV FYK+FL+      L+ + A+AI+EWDV VAH  SF +LY  AF   EPFWVKGS LAGT FH TAT+ D W +LGH+NGNAIYNN+DPAF  FV +TL RWGYSYSYDVALWAT+SDFPYSW LWQR+S++F++T LI NVGF DV+   + +A+  ET+FIHGS + GG              + A  +     +R                        T  C   C S  S  L  G         ++TVCD +  S  +   A  +    +CGAGD   +G  CRSCY D E AL ADR L N + +   +   HVIMCDT  PP+AS+CS  C    DT                        +CD RC +GL+G++NC+W   G                CR CF +T+ A  AD  AK  G RVI+C THEPP+     +    EK                            GH   GG A         P+       S  +  G     EMC F   Y   L ET  SV S+  F+PGMRV +A     F VFNRTLG  PDV I NA++   H++L+AD  CG GT+LI Y+  G+V+SR F++KDTHG    L+V  T+  ++   H RR   +  LLGF  P+F+YG DL LPA  N +LR VL
Sbjct:   27 PQENVYPKGPSVQFYKLFLEDTFKEKLERFGAIAIMEWDVRVAHDKSFEKLYIAAFDVVEPFWVKGSVLAGTNFHGTATITDNWRMLGHINGNAIYNNSDPAFADFVEFTLARWGYSYSYDVALWATVSDFPYSWPLWQRFSSKFVSTNLIANVGFLDVDQETLGNALASETMFIHGSLSGGGGTQFASGATAEKGGNAAAASEGGNSLRIMASLEANAAGEDVGGGGPSIRLATPECRTECGSTVSWDLLGGGGGEDGVMDIATVCDHATCSAATAGSADGKPGAWSCGAGDEERFGKHCRSCYFDAEEALKADRILQNQAREVGEVQPRHVIMCDTLRPPEASTCSLKCALKKDTARTNSSMRPPEPHVNPVWLYVPPQICDDRCESGLFGNYNCNWRDHGALLWTQMILFTPAPEHCRFCFDDTAAAIVADETAKRMGGRVIMCNTHEPPVERTQAEMDALEKKRIEHVMEATASKMANAAKQGKKTSNTKGHANPGGKAAGDEGEPDAPVHPAMIEYSENLLRG-----EMCAFSTAYHLYLRETEASVRSLAHFLPGMRVRLAVDTIHFSVFNRTLGGYPDVEIVNATTTGGHASLLADVHCGEGTKLILYLGPGDVVSRPFSKKDTHGTCGQLLVPYTEPDRLDEYHVRRTQATTFLLGFDAPSFSYGADLFLPAWVNPELRRVL 712          
BLAST of mRNA_Ecto-sp13_S_contig914.20707.1 vs. uniprot
Match: A0A6H5K6N3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K6N3_9PHAE)

HSP 1 Score: 469 bits (1208), Expect = 3.840e-146
Identity = 289/765 (37.78%), Postives = 385/765 (50.33%), Query Frame = 1
Query:  130 MAVVVPVYDGDINDAMISLSKWPTTCSENTRKGMDLVIYKAEAVGNADT-----LPRIPRQASACFRRTKVVGGGLLPEENVYPTGASVMFYKMFLDSDVAHALDEYDALAIIEWDVLVAHHTSFSRLYETAFCS-EPFWVKGSTLAGTEFHQTATVRDMWHILGHLNGNAIYNNTDPAFTQFVNYTLTRWGYSYSYDVALWATISDFPYSWLLWQRYSTRFIATKLITNVGFFDVNDTYVAHAILQETLFIHGSTASGGSVANPTPKATPVRFTSTCTDACSSVHSPGLPAGMSTVCDESCFSGWSPAGPRFRGHNCGAGDPSLYGSTCRSCYTDEEVALAADRSL----------------GNASSD---------------------------------------------------------------------PFLAGA-HVIMCDT-GEPPQASSCSPACRSMADTVCDSRCGTGLYGDFNCDWLGLGLTCRQCFQETSVAQFADSIAKTRGQRVILCATHEPPLSAGSLKSHVEE-------KLGHGGGGGDANA--------------------STTFPLESDRSNRSTAVFVGSTTINEMCVFLRGYFDLLAETRLSVLSVLEFMPGMRVAVATHPRDFQVFNRTLGYLPDVAIGNA-SSVEHSALIADKMCGNGTRLIYYMNVGEVLSRTFTRKDTHGVLKDLIVSSTDSAQVPFEHARRAAGSAVLLGFTTPAFTYGTDLILPAETNEQLRAVL 2061
            +AVVVP+   D+  A  SL+ WPT C  +T    DLV Y A   G  D      L  I +    CF RT++V      ++N  P  AS+ FYK++LDS +     +YDALA++EW+V+VAH  SF  LY  AF   EPFWVKGS L     H+     +    +GH+NGNAIYNNTD  F  +VN+T+TRW Y+  YD ALWATISDFPYSW LWQR+S +F+ T LI NVG  DV+   +  A+   TLFIHG+   GG V+         R T +C     + H+   P+G +TVCD SC++G    G RF GH CGAGD + YG+ CR+C+TD   A AA+ +L                GN + +                                                                     P L    HVIMCDT   PP AS CS  C  M D VCD  CGTG +GD+NC+W G G  CR C+ +   A  A+ +A+ RG  V++C T EPP      +S VE        KL       DA+A                    S T   E+  SN +   FV      ++C FL      L ET++SV S+ +FMPGMRVA+AT   D  +F R  G +P+V +  A  S   + L+AD+ CG GT+LI YM  GE+L RTFT +DTH    DL+V+ ++  +V      +A  + ++LGF  P+F++GTD+ILP + N +LR  L
Sbjct:   94 LAVVVPIQAADVRKAQASLAAWPTRCHSSTLVNTDLVAYYA---GGDDEHVSAMLATIEQTGGRCFARTRLVLAHASDKDNERPKMASIQFYKLYLDSTIRCQFADYDALAVMEWNVIVAHDRSFEELYTAAFGGVEPFWVKGSALVSGSSHEIVVHSENRTTVGHINGNAIYNNTDQTFVDYVNFTVTRWEYTLPYDEALWATISDFPYSWPLWQRFSRKFVTTNLIANVGVHDVDIRELLDAVAGGTLFIHGTPTDGG-VSMVGSNELAERCTVSCGFRFPNAHATMAPSGTATVCDRSCYAGGRD-GARFGGHLCGAGDVATYGAHCRTCFTDLGEAEAAEDTLALQERLVLEREGDTRTGNVAFEKSWRSDEAAWTYGRGGEGWPQQEVGEQHVEGGVGGNRDNRERGAVGHQRQQGGVNIMEPKQDRDMNKVQPILEKQRHVIMCDTLMPPPAASGCSHQCHEMDDAVCDRSCGTGRHGDYNCNWRGYGKNCRYCYNDRLQAMAANVVARQRGGSVVMCNTFEPPTEDEDWESPVEAEKVRAMVKLDEEA---DADAQEKAPQTSMPAPLPHSFNTGSATLTDEATSSNPANEPFVTGIKRGQICAFLTSNTFFLKETQVSVKSIGQFMPGMRVAIATDANDVSLFKRVFGTVPEVRVSVAIRSTSRAPLLADRHCGEGTKLILYMKAGELLWRTFTSRDTHSPAGDLLVAYSELDRVGQSRKNKALAAMLVLGFKGPSFSFGTDIILPVDVNRELRNFL 850          
BLAST of mRNA_Ecto-sp13_S_contig914.20707.1 vs. uniprot
Match: A0A6H5L0V3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0V3_9PHAE)

HSP 1 Score: 457 bits (1177), Expect = 4.330e-145
Identity = 253/511 (49.51%), Postives = 315/511 (61.64%), Query Frame = 1
Query:  793 ITNVGFFDVNDTYVAHAILQETLFIHGSTASGGSVANPTPKAT--PVRFTSTCTDACSSVHSPGLPAGMSTVCDESCFSGWSPAGPRFRGHNCGAGDPSLYGSTCRSCYTDEEVALAADRSLGNASSDPFLAGAHVIMCDTGEPPQASSCSPACRSMADTVCDSRCGTGLYGDFNCDWLGLGLTCRQCFQETSVAQFADSIAKTRGQRVILCATHEPPLSAGSLKSHVEEKLGHGGGGGDANASTTFPLESDRSNRST--------AVFVGSTTINEMCVFLRGYFDLLAETRLSVLSVLEFMPGMRVAVATHPRDFQVFNRT----------------------------LGYLPDVAIGNASSVEHSALIADKMCGNGTRLIYYMNVGEVLSRTFTRKDTHGVLKDLIVSSTDSAQVPFEHARRAAGSAVLLGFTTPAFTYGTDLILPAETNEQLRAVLHTKEKLNELVVVQAQGKHRRSRRKLGFMFEYLASVAHSHRGSATIYIPEV 2211
            I+N+GFFD+ND +V  A+ Q+TLFIHG+T SGGSVA+   K    P   +S CTDAC S  S G  AG+ST+CDESC   WS  GPRF GHNCGAG+ S YGS CR CYT+ E A  A+  L  +S D   + AHV+MC T  PP   SCS  C +  DTVCD RCG+GLYGD +C+W GLG TCR CF + S A  AD   K +G RVILC T EPP S GS     E +  + GGG     +++ P   D     T           + S+   +MC F+RGYF+ L+ET +SV SVL+FMP MRVA+ THPRDF VFNR+                             G+L  V+IGN+SSVE+ +L+AD++CGNGTRLIYYM VG+VLSRTFT K TH   ++LIVS  D+  V  E+ RRA GS VLLGF  P FT+G+DLILPAETN QLRA+L TK +    +     G    +   +  ++ YLASVA  HR S +IY+PEV
Sbjct:    9 ISNIGFFDINDKHVEKAVSQDTLFIHGNTLSGGSVASLPVKHAHRPRHSSSNCTDACGSRTSAGNSAGISTICDESCSVKWSSTGPRFGGHNCGAGNASQYGSNCRLCYTNSEEASTAESMLALSSVDTLASDAHVVMCGTRNPPSGPSCSAGCENTIDTVCDYRCGSGLYGDLHCNWRGLGKTCRLCFHDDSAAYLADEAVKAQGGRVILCNTLEPPRSIGS---EAEARRNNSGGG---RLASSIPENDDPIGWQTNGTISDPVPTVLSSSMGGQMCAFMRGYFEFLSETIISVRSVLDFMPAMRVAIVTHPRDFHVFNRSESFALSMRLTLAPSRIGPPNEFPKQSVEFGHLQHVSIGNSSSVEYGSLMADQLCGNGTRLIYYMEVGQVLSRTFTLKGTHTARQELIVSFADARDVHPENVRRAMGSTVLLGFPAPTFTHGSDLILPAETNGQLRALLGTKTRQGRRLEAGLHG----AELDVEDLYAYLASVADLHRESTSIYVPEV 509          
BLAST of mRNA_Ecto-sp13_S_contig914.20707.1 vs. uniprot
Match: A0A6H5JL39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL39_9PHAE)

HSP 1 Score: 308 bits (790), Expect = 5.170e-95
Identity = 166/328 (50.61%), Postives = 197/328 (60.06%), Query Frame = 1
Query:  793 ITNVGFFDVNDTYVAHAILQETLFIHGSTASGGSVANPTPKATPV--RFTSTCTDACSSVHSPGLPAGMSTVCDESCFSGWSPAGPRFRGHNCGAGDPSLYGSTCRSCYTDEEVALAADRSLGNASSDPFLAGAHVIMCDTGEPPQASSCSPACRSMADTVCDSRCGTGLYGDFNCDWLGLGLTCRQCFQETSVAQFADSIAKTRGQRVILCATHEPPLSAGSLKSHVEEKLGHGGGGGDANASTTFPLESDRSNRST--------AVFVGSTTINEMCVFLRGYFDLLAETRLSVLSVLEFMPGMRVAVATHPRDFQVFNRTLGYLP 1746
            I+N+GFFD+ND +V  A+ Q+TLFIHGST SGGSV +   K  P     +S CTDAC S  S G  AG+ST+CDESC   WS  GPRF GHNCGAG+ S YGS CR CYT+ E A A +  L  +S D   + AHV+MC T  PP   SCS  C    DTVCD RCG+GLYGD +C+W GLG TCR CF + S A  AD   K +G RVILC T EPPLS GS     E +    GG   +  + + P   D     T           + S+   +MC F+RGY + L ET  SV SVLEFMP MRVAV THP DF VFNR+    P
Sbjct:   35 ISNIGFFDINDKHVEKAVSQDTLFIHGSTLSGGSVVSSPVKHAPRPRHSSSNCTDACGSRPSSGSSAGISTICDESCSVEWSSTGPRFGGHNCGAGNASQYGSNCRLCYTNSEEASAEESILALSSVDTSASDAHVVMCGTRNPPSGPSCSAGCEGTIDTVCDYRCGSGLYGDLHCNWRGLGKTCRLCFHDVSAAHLADEAVKAQGGRVILCNTLEPPLSIGS---EAEARRNKSGG---SRLAPSIPENHDPIVSQTDGIIDDPVPTILSSSMRGQMCAFMRGYSEFLPETTSSVRSVLEFMPAMRVAVVTHPSDFHVFNRSESAAP 356          
BLAST of mRNA_Ecto-sp13_S_contig914.20707.1 vs. uniprot
Match: A0A6H5KID1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KID1_9PHAE)

HSP 1 Score: 311 bits (796), Expect = 7.050e-91
Identity = 174/365 (47.67%), Postives = 221/365 (60.55%), Query Frame = 1
Query: 1231 SCSPACRSMADTVCDSRCGTGLYGDFNCDWLGLGLTCRQCFQETSVAQFADSIAKTRGQRVILCATHEPPLSAGSLKSHVEEKLGHGGGGGDANASTTFPLESDRSNR------------STAVFVGSTTINEMCVFLRGYFDLLAETRLSVLSVLEFMPGMRVAVATHPRDFQVFNR--------------------------TLGYLPDVAIGNASSVEHSALIADKMCGNGTRLIYYMNVGEVLSRTFTRKDTHGVLKDLIVSSTDSAQVPFEHARRAAGSAVLLGFTTPAFTYGTDLILPAETNEQLRAVLHTKEKLNELVVVQAQGKHRRSRRKLGFMFEYLASVAHSHRGSATIYIPEV 2211
            S S   R  +  VCD RCG+G YGDFNCDW GLG TCR CF E   A  AD  AK    RV++C THEPP   GS  ++ EE+ GHG        +   P   +RSN+            S   ++G+TT  ++C F+RGY  LL  T+++V SVL FMPGMR+ +ATHP DF+ F+R                          T G+LP+V +G +++VEH  L+AD +CG  TRLIYYM+ GE+LSRTFT+KDTH V+ DLIVS  ++ +VP   A R  GS+VLLG TTP FTYG+DLILPAETN QLRAVL   +KL    V +   KH  S R +  ++EYLA VA +H+ SATI IPEV
Sbjct:   13 SSSSDSRLRSAQVCDYRCGSGRYGDFNCDWRGLGSTCRLCFNELPAAHLADEFAKAHDGRVVMCNTHEPPPPIGSY-TNKEEENGHGSADAGNGPTLVAPAPHERSNKEIISGNEESQGPSATEYIGTTTRGQICAFMRGYSRLLPITKVAVSSVLHFMPGMRIGIATHPSDFEEFHRSAAILENCLEEVHKRSVDPGRSHSPETFGHLPNVTVGTSTNVEHGPLVADYICGEATRLIYYMDAGEMLSRTFTKKDTHTVMGDLIVSLVNTDEVPQVVAARGMGSSVLLGVTTPTFTYGSDLILPAETNAQLRAVLEGNQKL----VARTDAKHGHSDR-VERIYEYLAGVASTHKDSATINIPEV 371          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig914.20707.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KI77_9PHAE2.170e-28186.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKL9_ECTSI3.500e-17941.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRS3_ECTSI8.360e-17057.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KZV7_9PHAE9.290e-16841.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LCC7_ECTSI1.070e-16243.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKY0_9PHAE3.330e-15041.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6N3_9PHAE3.840e-14637.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L0V3_9PHAE4.330e-14549.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL39_9PHAE5.170e-9550.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KID1_9PHAE7.050e-9147.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig914contigEcto-sp13_S_contig914:13096..20107 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score305.4
Seed ortholog evalue7e-80
Seed eggNOG ortholog2880.D7FI37
Model size2235
Hectar predicted targeting categorysignal peptide
Exons7
EggNOG OGs2D0G2@1,2SE3H@2759
Ec32 ortholog descriptionHypothetical protein
Ec32 orthologEc-09_000700.1
Cds size2235
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig914.20707.1prot_Ecto-sp13_S_contig914.20707.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig914 13096..20107 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464185.7421067-CDS-Ecto-sp13_S_contig914:13095..134461681464185.7421067-CDS-Ecto-sp13_S_contig914:13095..13446Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig914 13096..13446 +
1681464185.75827-CDS-Ecto-sp13_S_contig914:14299..145761681464185.75827-CDS-Ecto-sp13_S_contig914:14299..14576Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig914 14300..14576 +
1681464185.769992-CDS-Ecto-sp13_S_contig914:15159..152291681464185.769992-CDS-Ecto-sp13_S_contig914:15159..15229Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig914 15160..15229 +
1681464185.780879-CDS-Ecto-sp13_S_contig914:15413..155071681464185.780879-CDS-Ecto-sp13_S_contig914:15413..15507Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig914 15414..15507 +
1681464185.7990162-CDS-Ecto-sp13_S_contig914:16727..172011681464185.7990162-CDS-Ecto-sp13_S_contig914:16727..17201Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig914 16728..17201 +
1681464185.815328-CDS-Ecto-sp13_S_contig914:17981..184421681464185.815328-CDS-Ecto-sp13_S_contig914:17981..18442Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig914 17982..18442 +
1681464185.8312407-CDS-Ecto-sp13_S_contig914:19599..201071681464185.8312407-CDS-Ecto-sp13_S_contig914:19599..20107Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig914 19600..20107 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig914.20707.1

>prot_Ecto-sp13_S_contig914.20707.1 ID=prot_Ecto-sp13_S_contig914.20707.1|Name=mRNA_Ecto-sp13_S_contig914.20707.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=745bp
MRYALLSAIGSCFCTLAVWMLCPNLLSRWSRTYYPAQDWHGHVMAVVVPV
YDGDINDAMISLSKWPTTCSENTRKGMDLVIYKAEAVGNADTLPRIPRQA
SACFRRTKVVGGGLLPEENVYPTGASVMFYKMFLDSDVAHALDEYDALAI
IEWDVLVAHHTSFSRLYETAFCSEPFWVKGSTLAGTEFHQTATVRDMWHI
LGHLNGNAIYNNTDPAFTQFVNYTLTRWGYSYSYDVALWATISDFPYSWL
LWQRYSTRFIATKLITNVGFFDVNDTYVAHAILQETLFIHGSTASGGSVA
NPTPKATPVRFTSTCTDACSSVHSPGLPAGMSTVCDESCFSGWSPAGPRF
RGHNCGAGDPSLYGSTCRSCYTDEEVALAADRSLGNASSDPFLAGAHVIM
CDTGEPPQASSCSPACRSMADTVCDSRCGTGLYGDFNCDWLGLGLTCRQC
FQETSVAQFADSIAKTRGQRVILCATHEPPLSAGSLKSHVEEKLGHGGGG
GDANASTTFPLESDRSNRSTAVFVGSTTINEMCVFLRGYFDLLAETRLSV
LSVLEFMPGMRVAVATHPRDFQVFNRTLGYLPDVAIGNASSVEHSALIAD
KMCGNGTRLIYYMNVGEVLSRTFTRKDTHGVLKDLIVSSTDSAQVPFEHA
RRAAGSAVLLGFTTPAFTYGTDLILPAETNEQLRAVLHTKEKLNELVVVQ
AQGKHRRSRRKLGFMFEYLASVAHSHRGSATIYIPEVGVVPSVCR
back to top

mRNA from alignment at Ecto-sp13_S_contig914:13096..20107+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig914.20707.1 ID=mRNA_Ecto-sp13_S_contig914.20707.1|Name=mRNA_Ecto-sp13_S_contig914.20707.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7012bp|location=Sequence derived from alignment at Ecto-sp13_S_contig914:13096..20107+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGGTACGCCTTGCTATCCGCCATAGGCTCATGCTTCTGCACCTTGGC CGTGTGGATGCTGTGCCCAAACCTGCTCTCCCGTTGGTCACGTACATATT ACCCTGCTCAAGATTGGCATGGCCATGTAATGGCCGTAGTCGTTCCGGTA TACGATGGCGACATAAACGATGCAATGATATCGTTGTCGAAGTGGCCGAC GACCTGCTCCGAAAACACGCGGAAGGGCATGGACTTGGTGATCTACAAAG CAGAGGCTGTTGGCAATGCGGACACACTACCTCGGATACCACGTCAAGCA TCAGCGTGCTTTCGGCGTACCAAGGTTGTTGGAGGAGGTCTGCTTCCGGA GGTATGACACGTGGCTTTCTCTGCCGTCTTCACTGCTGGGAGTAATACAG TGGCAATACAACAGAGTCCAGAGTTCGGTGGCGAAGCACCTTTTAACGTG AGATTGATTCGAACGTGAAACCGGTACTCGTACCCATCCCAAGCAGATAT GAGCGCTACATCCCGTTGTATGGTGGAATGCAAATCTGTACTACAATTTG GGTATGCCGACGTTCCCCCCGACGTTATCGGAGATGCAGTTGCCTGTTGA CCAATCACAAGTGACGAATTTCTTCATCAATGTGTCTGATTATAGGTGGC CAGGGATAGAGTGAGACACTGACGGAGAAAACCCCTCTTGGAACACCCAA CGGGCCTGGTTGTTACTTTGAAACTCGCCACCCCTCCCTATTTTTATGCG AACAAGCCAGCTGAACCCAGCCAGGGAAGTCCGACTACCGCTACTGAGCG CAGGGGCCTGACATGACCACGTCCCCAAACGGCAATCGACCCTTCCACAA CATTTAAACCGATTCAGACTACGTCCTCCTTGCCGCCAACCCTTCGGTAC CGATATCGTTTCGCACACCGATCGTCTTCGCTTCTTACGTGTACTTCTGG TCGTTTCGTTTGGCGACACTCATCCCGAGTCCACGACTTGCTTCCAAGCG ATATGCATGTAGGCATTCAAATACCAACTCCCACAAGTCTGAATGACTCA CTCGGAATCCCCCCCCGGCGCCGCAGCTAATGCGAGAGCCGTGCCCCCCT TCACGAGGGCTTCGTTTGACCCGATGACATCATCGATTCACTTCGCGCTT GACCCGACCGTTGTGATATTTTCTGGCCTGCTGCTATCGAACACATCGCC ATAGGAGAACGTGTACCCAACGGGCGCGTCGGTAATGTTCTACAAAATGT TCCTCGACTCCGACGTAGCCCACGCCCTTGACGAATACGACGCACTTGCC ATCATTGAGTGGGATGTCTTGGTGGCGCATCATACGAGCTTTTCGAGACT GTACGAAACGGCGTTCTGCTCTGAGCCGTTCTGGGTGAAGGGAAGCACAC TAGCCGGCACTGAGTTTCATCAAACCGCAACCGTGAGGGATATGTGGCAT ATCTTAGGACATCTTAACGGCAACGCCATATGTAAGTCGTCGTAGAACGG CTGGTACCACACAATCCACGGCTGCCAAAAGAGTCGCATGGTTCAACGTT CGTGACTGACAAACTCGCCGACGAGTTCAGGACTGCACGAATGGCACACT GAAGTATATGCAAGGAGTATGTTGGAGAAGTCGTCACGTGGCGGCAACGT GCTAGTTTCAGTTTCGGGGTGCGTTTTGCTGTTTTCTCTCCCTAGGGACG GAGGTTCTTTAACACGAATACCTTTGGTCACGGTTGTCCGTTTTCGTTGC AAGCCTTTTGTTTGGTGGGCGGAGTAAACTCCCCGCCTATGCGAATCTTG ATCGCTCGTTTTGACGTGACTCCAGGGTGTTACGTCGTTTCACATCTTCG AGTAGTATATCTTCTCTATGATTCTCCATTCGTCGGACGCTCTCGGGTAG GGGTCAAACTTCCAGTGTATGCACAAGTTGGACGTGTACGAACCTAGTCG TCGCAAAGTCCAGTCGACCACTCGGCGTGCCAACCTATAAGGTCCGACGT GCCTGTTCCTGCCGATGTACCTACTCACGTTCTCCCGCCCGCGCCCCTCA ATGTGCGTTTCCAGACAACAATACGGACCCGGCTTTCACCCAGTTCGTAA ACTACACCCTCACACGTTGGGGATATTCTTACTCGTAAGTGCCCCCATTG GAATGGGAGAGAGAGAGAGAGAGAGCGGGCGCTGGCACCCGGCGTTTGTT AGTCGAAGCTGATGCTGAAAGTTTGACACCGGTGCTCTTCCAAAAAGTCT TCTTCCCGCCGCACACGATTAATACTCTCATGGTAACTGCCATTGCTGCG CTGTACACGATTTCGCAGGTACGACGTTGCGCTGTGGGCTACGATATCGG ATTTCCCCTACAGCTGGTTGCTTTGGCAGCGATATTCGACACGCTTCATC GCAACAAAGCTGGTACGATATCACCCGTTGTTGGTAGAGTTTTCTTGAGC TTTGAATGTGCATTATTCTATGAACCACATTGTTCTTCCAGAGATTATTG CAGGGCCTCAAGCACCGAGTAGCACGCCTCCGACTTCAGATCTTACGATG CTATCAAGGAGGGATTCAATGAGTGACAATATTGGGTTAGCTCGTGATCG TGATCATGATCGGTTCATGACTGAATCATGACCGGATCATGACCCAGTGA TGGGTTCACGACTCAGCCGTGACCCGGTCATGATCCATCGATGACCATGA TCGTGTCTGGCTCCGTCATGAGCCGGTGTCGTGACCCGATCATGATCGGG TCATGACCGAAGTCATAACCTGGTCTTGGCTTGGTTTGTCGGTTTTTACT TTCTCATGAAGCTCGGGCACACTACTGGAATATGACCTGGTGATGATCTA GCCTGGTTGTGCCACTACCGAGTCGTGATCGTGTAATGACCGGGTCACGA CGAGTGCACCATTACCGAGACATGGTCATGTCGTCACCCCATCGCGACCG AACCATGATCCGATGGTGAGCCTAGATGCATTTTATCAACACCAACCTAG CACTTATGCCGCCACATCCACCCAGACATGTCCCTATCCAACCTCGCGCC GATGCTTGCACACTGACCTACATAGGACGTGTCCATCCAGCGCCAACCTA GCAAGGTTTGAGGTTCGGGCGAGGGTAAGCGATAAAGATTTTGGCAGGTG TCATGTTCTTGCCAAACCAGACAGGCTTTTTCTCAGGTGCACGAGCACTT CATTGGTGATGACCGGGCCATGACCCAAGAATGACCGAGGCATGACTTCA GCCATGATCGAGATCATGATCCCGGTCATGACTCCATCTTCATGACTGGG TCATAACCTGTTCATGCCTCGGTCTTGACTCGATCGGTCATGATCGGTCA TGACGGCATGATCGGGTTATAACCCAGTCATGAGCTACGATGGAGTAATG CCTGAACCATGATCAAAACCCAACAATGTCAAGGCAGACCCCGCAAGCAG TTCCAACGTACCACATTATCCACATGTGTTGGAGATGGAAATCTTTGACC GAGTACTATGAGTGCCTTGTGATGCCAACAATGACACGGTGCAACGCTCG TCTGGGAAAATATGACTCTTGTAGCCTGTTGTAACCGTTGCTGGCACCTC GGCTTCCGCTGACCTTGTGCTCATCACGACAGATTACCAACGTAGGGTTC TTCGACGTCAACGACACTTACGTGGCACACGCCATCTTGCAAGAGACGTT ATTTATTCACGGCAGTACGGCCAGTGGCGGAAGTGTCGCGAATCCCACCC CCAAGGCAACACCTGTGCGTTTTACCAGCACCTGCACGGATGCTTGTAGC TCCGTGCACTCACCAGGGCTTCCAGCGGGCATGTCTACCGTCTGTGATGA AAGCTGCTTTTCTGGTTGGTCACCTGCTGGACCACGCTTCCGGGGTCACA ATTGCGGCGCGGGGGACCCATCGCTGTACGGTAGCACGTGCAGATCGTGC TACACCGACGAGGAAGTAGCCTTGGCTGCAGATCGTTCCCTTGGGAACGC GTCGTCGGATCCCTTTTTGGCAGGAGCTCACGTCATCATGTGTGACACCG GAGAGCCGCCCCAGGCTTCGAGTTGTTCTCCTGCATGCCGGAGTATGGCC GACACGGTAAGTTGATTCAGGCTACGGGTGTGAAACAAAACATAGTGCCA CGAGTTTTTTTTCTACGAATGATGTGTCAGGGAATCAACTGGCACTTCGG AGAACAATGAAACACCTCGGAAGGGCTCACCTGTCGGCAAGTCTGGGTGG ATCTCGATGTTCTGGGCAAATGGGCTTACGGCGGGTAGTACAGGCGAGAA GACCTTTTTCTCTCACCAAATACGTGTACTTTGCCATGTTCTTATTCATC GTCGAACAACTGTTGTACTACAGTACAATAGATTGAATTCGGGTCCGCCA TACTGGCGTTTTGCCGTGAAGGCTGCCAGCAAGCGTTGTAGCGGTCCACC TAAACTTGTGAGTTGTGCTAGAGCAAGTGTGACATGGCGTCACCACGGGC CAAGAATATGACCATGTGCGCCCATCATTGCGCATGTTGCTGTCTGCAGC TCGATACATTGTGGAACGATGCGAAAGAATCGTCTTGTGGCGCTGGGGAC AGCGGCTCTTGGTTTTGCTCAGGTTTTTTGCCACATATATTGCTTTCGGC TCAAGCATTTGCTGACACAAGCCTCCCGGCATCCACAAGGAGTCCCTGTT TACACAGCGTCTGGACAGGGGGTTTGGCTAAGGTTGCAATGTCCCCATGG CAATGGGAAACGAGTGAATGCATGTAGCTGCAGAGGTTCACGTTGCGCCT TTCATCTGCCGCGTCTCTTGCGACACTCGGTTCCGTACCGCGACCAATAT TCGGGCGTTATTCTCGATCTCCGTGTCCCTTCTCAGGTGTGCGACTCTCG TTGTGGAACTGGGTTGTATGGGGATTTCAACTGCGACTGGTTGGGTCTTG GGCTGACTTGTCGTCAGTGCTTTCAAGAAACATCGGTGGCCCAATTTGCG GACAGCATTGCCAAGACTCGCGGTCAAAGAGTGATATTGTGCGCAACGCA CGAGCCCCCGTTATCGGCCGGATCCCTCAAGAGCCACGTCGAAGAGAAGC TGGGGCATGGCGGCGGTGGTGGTGACGCGAATGCCTCAACAACTTTTCCC CTAGAGTCAGATAGAAGTAATCGCTCGACGGCGGTATTCGTCGGCTCTAC AACAATCAACGAGATGTGCGTGTTCCTGCGCGGATATTTTGACCTCCTGG CGGAGACAAGATTGTCGGTTTTGAGCGTTCTGGAGTTCATGCCGGGAATG CGCGTCGCTGTAGCAACACATCCGAGGGATTTTCAAGTATTCAACAGGTG AGAACACTCTCGCAAGCATATCTTTACCGATTTAGGAGGAGGACGTAAGC ACGCACATTCGCAACAACAGAATGTTCTGTGTACACCTCCTCCGACCGCG CTGCAAGCTCTAACCCTGTAGGTGGAATTTCGTTTAACGCTGTTTCCGTG GCGATGCGTGTATCTCAGATAATCATCGGCCTTCACGGGGTTAAAGAACA ATTATACCCCCGTAGGTCAATCCGACACTGTTCTCCCTCGACCCGCCGCC CACCCAATATGACGTTCAAAGCCGCATCCAAAAGCTGGACAGGAAATAGG TCACTGTGGCAGTGAATCACGCCCAACACGGTTGTCTTTGGCTTGTCAAC CATCACATCGCCAATCCAAAGAGAGACTCCGCCACCCTCCCCCCCAACAT ATGAGTCTTGTTCGCACAGAGCGAAATATTTCTCGTCGTCGGATATCTGG TGCTATTTGTATGGACCAACGACGGCCCAGAAGGAATCGTGTGGCGTTGT TTCTGTGCGTTGCTACTAAGGGCAAATATTGCACCACCGTAGGGCGAGCG GCCAGAATGTGACGACAAGGAGACGAAGAGGTACAATGAGGTTGAGGTGG TGTGTTTTATGCTCCGTGTCGAATTGGAGCAATTTTTTGGGGGTGTGGGG TGGTACACGCACGTGTTAGATACTACGGCGGTATTCGTTGCCTCGCCAAT CTGCAACGGCCTGCAAACTCACCTGTCCAACAACCAAAGAAGAAGGAGTG TCACGCCGTCCGAAGCTCCTTGACGATGAAGGGCGCCTCCACCGAGATTC GGGCCTCCATCCTGCGCGGTTTCTGTTTTCGATAAGGGTAAAAGAACCTT GATGGCGCACCGCAGGCTAACAGCGATAGTGACGAGGAAGGGCGCACCCA AAAATTTCTCACGAGTTTCAAGCCTTGCAACGTTTTCTTGGCGAACGCAT GTAAGTACGTGCGCAAAACATCGCAATTTGTTCCTTACCATGGTACAGGC ATGCGTCTGCGACCTTGAAGTGGGGGTTGATTTGATGTTGCAAGTCATTC ACATTCTTTCGAGGGCCTATACTCCTCATCTCATTGGCTGATACCCATGC CCCCGCTGCATCTATCACGCCTTGATTGCGCTGTTGTGCTGCTATACGAC ATAGGACACTTGGATATCTGCCTGACGTTGCAATCGGAAATGCATCCAGC GTAGAGCACAGCGCGCTGATAGCAGACAAAATGTGCGGCAACGGAACACG GCTGATCTACTACATGAACGTCGGTGAGGTGCTCAGTCGCACGTTTACAA GGAAGGACACACACGGGGTCCTGAAGGATCTCATTGTGTCGTCTACCGAT AGCGCACAAGTCCCCTTCGAGCACGCACGCCGTGCAGCAGGCAGCGCCGT TCTTTTGGGTTTCACCACGCCTGCATTCACGTATGGGACTGATCTCATCC TGCCGGCGGAAACGAACGAACAGCTCCGAGCTGTGTTACACACGAAGGAA AAACTGAACGAGTTGGTTGTGGTGCAAGCGCAAGGCAAGCACCGGCGATC CAGGAGAAAGCTAGGATTCATGTTTGAGTACTTGGCTTCGGTGGCTCACT CCCACAGGGGCTCCGCCACAATCTACATTCCGGAGGTAGGAGTAGTGCCC AGCGTTTGCCGT
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig914:13096..20107+

>mRNA_Ecto-sp13_S_contig914.20707.1 ID=mRNA_Ecto-sp13_S_contig914.20707.1|Name=mRNA_Ecto-sp13_S_contig914.20707.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2235bp|location=Sequence derived from alignment at Ecto-sp13_S_contig914:13096..20107+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGGTACGCCTTGCTATCCGCCATAGGCTCATGCTTCTGCACCTTGGC
CGTGTGGATGCTGTGCCCAAACCTGCTCTCCCGTTGGTCACGTACATATT
ACCCTGCTCAAGATTGGCATGGCCATGTAATGGCCGTAGTCGTTCCGGTA
TACGATGGCGACATAAACGATGCAATGATATCGTTGTCGAAGTGGCCGAC
GACCTGCTCCGAAAACACGCGGAAGGGCATGGACTTGGTGATCTACAAAG
CAGAGGCTGTTGGCAATGCGGACACACTACCTCGGATACCACGTCAAGCA
TCAGCGTGCTTTCGGCGTACCAAGGTTGTTGGAGGAGGTCTGCTTCCGGA
GGAGAACGTGTACCCAACGGGCGCGTCGGTAATGTTCTACAAAATGTTCC
TCGACTCCGACGTAGCCCACGCCCTTGACGAATACGACGCACTTGCCATC
ATTGAGTGGGATGTCTTGGTGGCGCATCATACGAGCTTTTCGAGACTGTA
CGAAACGGCGTTCTGCTCTGAGCCGTTCTGGGTGAAGGGAAGCACACTAG
CCGGCACTGAGTTTCATCAAACCGCAACCGTGAGGGATATGTGGCATATC
TTAGGACATCTTAACGGCAACGCCATATACAACAATACGGACCCGGCTTT
CACCCAGTTCGTAAACTACACCCTCACACGTTGGGGATATTCTTACTCGT
ACGACGTTGCGCTGTGGGCTACGATATCGGATTTCCCCTACAGCTGGTTG
CTTTGGCAGCGATATTCGACACGCTTCATCGCAACAAAGCTGATTACCAA
CGTAGGGTTCTTCGACGTCAACGACACTTACGTGGCACACGCCATCTTGC
AAGAGACGTTATTTATTCACGGCAGTACGGCCAGTGGCGGAAGTGTCGCG
AATCCCACCCCCAAGGCAACACCTGTGCGTTTTACCAGCACCTGCACGGA
TGCTTGTAGCTCCGTGCACTCACCAGGGCTTCCAGCGGGCATGTCTACCG
TCTGTGATGAAAGCTGCTTTTCTGGTTGGTCACCTGCTGGACCACGCTTC
CGGGGTCACAATTGCGGCGCGGGGGACCCATCGCTGTACGGTAGCACGTG
CAGATCGTGCTACACCGACGAGGAAGTAGCCTTGGCTGCAGATCGTTCCC
TTGGGAACGCGTCGTCGGATCCCTTTTTGGCAGGAGCTCACGTCATCATG
TGTGACACCGGAGAGCCGCCCCAGGCTTCGAGTTGTTCTCCTGCATGCCG
GAGTATGGCCGACACGGTGTGCGACTCTCGTTGTGGAACTGGGTTGTATG
GGGATTTCAACTGCGACTGGTTGGGTCTTGGGCTGACTTGTCGTCAGTGC
TTTCAAGAAACATCGGTGGCCCAATTTGCGGACAGCATTGCCAAGACTCG
CGGTCAAAGAGTGATATTGTGCGCAACGCACGAGCCCCCGTTATCGGCCG
GATCCCTCAAGAGCCACGTCGAAGAGAAGCTGGGGCATGGCGGCGGTGGT
GGTGACGCGAATGCCTCAACAACTTTTCCCCTAGAGTCAGATAGAAGTAA
TCGCTCGACGGCGGTATTCGTCGGCTCTACAACAATCAACGAGATGTGCG
TGTTCCTGCGCGGATATTTTGACCTCCTGGCGGAGACAAGATTGTCGGTT
TTGAGCGTTCTGGAGTTCATGCCGGGAATGCGCGTCGCTGTAGCAACACA
TCCGAGGGATTTTCAAGTATTCAACAGGACACTTGGATATCTGCCTGACG
TTGCAATCGGAAATGCATCCAGCGTAGAGCACAGCGCGCTGATAGCAGAC
AAAATGTGCGGCAACGGAACACGGCTGATCTACTACATGAACGTCGGTGA
GGTGCTCAGTCGCACGTTTACAAGGAAGGACACACACGGGGTCCTGAAGG
ATCTCATTGTGTCGTCTACCGATAGCGCACAAGTCCCCTTCGAGCACGCA
CGCCGTGCAGCAGGCAGCGCCGTTCTTTTGGGTTTCACCACGCCTGCATT
CACGTATGGGACTGATCTCATCCTGCCGGCGGAAACGAACGAACAGCTCC
GAGCTGTGTTACACACGAAGGAAAAACTGAACGAGTTGGTTGTGGTGCAA
GCGCAAGGCAAGCACCGGCGATCCAGGAGAAAGCTAGGATTCATGTTTGA
GTACTTGGCTTCGGTGGCTCACTCCCACAGGGGCTCCGCCACAATCTACA
TTCCGGAGGTAGGAGTAGTGCCCAGCGTTTGCCGT
back to top