mRNA_Ecto-sp13_S_contig9134.20701.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9134.20701.1 vs. uniprot
Match: D7FKP6_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKP6_ECTSI) HSP 1 Score: 578 bits (1491), Expect = 2.050e-195 Identity = 278/298 (93.29%), Postives = 291/298 (97.65%), Query Frame = 1
Query: 1 SFLVEVADSSTTPTGPTIAGGLFHTCAVLSDLSLKCFGGGSALGVADLEPTSSVEDGFGNFGQLGTGNNETLGDEEDEMSSNLPEVDLGGNTVLQVAAGQSHTCVLLASGDVACWGFNEYGQLGLGDTEHRGNSSSDMGEGLAVVDLGSGRTATHIACGQHHTCAILDIGSLKCWGYNSYGALGLGDTDNRGETNDTMGDYLPSVDLGTGHTALAVAGGRHHTCAILNNQALKCWGAKNDTTSNYGQLGQGNTDAIGIAPGQMGDNLPEVDLGTNRTAVALETGWYHTCVILDNKELH 894
SFLVEVADSSTTPTGPT+AGGLFHTCAVLSDLSLKCFGGGSALGV +LEP SSVE GFGNFGQLGTGNNETLGDEEDEMSSNLPEVDLGGNTVLQVAAGQSHTCVLLASG+VACWGFNEYGQLGLGDTEHRGNSSSDMGEGLAVVDLG+GRTATHIACGQ+HTCAILDIG+LKCWGYNS+GALGLGDTDNRGE NDTMGD LP VDLGTGHTALAV+GGRHHTCAIL+N+ALKCWGA+NDT+SNYGQLGQGNTD IGIAPGQMGDNLPEVDLGTNRTAVALETGW+HTCVILDNKELH
Sbjct: 21 SFLVEVADSSTTPTGPTVAGGLFHTCAVLSDLSLKCFGGGSALGVTELEPGSSVEHGFGNFGQLGTGNNETLGDEEDEMSSNLPEVDLGGNTVLQVAAGQSHTCVLLASGNVACWGFNEYGQLGLGDTEHRGNSSSDMGEGLAVVDLGTGRTATHIACGQYHTCAILDIGALKCWGYNSFGALGLGDTDNRGEANDTMGDNLPFVDLGTGHTALAVSGGRHHTCAILDNEALKCWGARNDTSSNYGQLGQGNTDGIGIAPGQMGDNLPEVDLGTNRTAVALETGWHHTCVILDNKELH 318
BLAST of mRNA_Ecto-sp13_S_contig9134.20701.1 vs. uniprot
Match: A0A6H5JPT1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT1_9PHAE) HSP 1 Score: 434 bits (1117), Expect = 1.550e-140 Identity = 204/220 (92.73%), Postives = 213/220 (96.82%), Query Frame = 1
Query: 235 MSSNLPEVDLGGNTVLQVAAGQSHTCVLLASGDVACWGFNEYGQLGLGDTEHRGNSSSDMGEGLAVVDLGSGRTATHIACGQHHTCAILDIGSLKCWGYNSYGALGLGDTDNRGETNDTMGDYLPSVDLGTGHTALAVAGGRHHTCAILNNQALKCWGAKNDTTSNYGQLGQGNTDAIGIAPGQMGDNLPEVDLGTNRTAVALETGWYHTCVILDNKELH 894
MSSNLP+VDLGGNTVLQVAAGQSHTCVLLASGDVACWGFNEYGQLGLGDT+HRG SSSDMGEGLAVVDLG+GRTATHIACGQ+HTCAILDIGSLKCWG N+YGALGLGDTD+RG+TNDTMGD LPSVDLGTGHTALAVA GRHHTCAILNN+ALKCWGAKNDT +NYGQLGQGNTD IG APGQMGDNLPEVDLGTNRTAVALETGWYHTCVILDNKELH
Sbjct: 1 MSSNLPQVDLGGNTVLQVAAGQSHTCVLLASGDVACWGFNEYGQLGLGDTQHRGTSSSDMGEGLAVVDLGTGRTATHIACGQYHTCAILDIGSLKCWGRNNYGALGLGDTDDRGQTNDTMGDQLPSVDLGTGHTALAVAAGRHHTCAILNNEALKCWGAKNDTMTNYGQLGQGNTDGIGTAPGQMGDNLPEVDLGTNRTAVALETGWYHTCVILDNKELH 220
BLAST of mRNA_Ecto-sp13_S_contig9134.20701.1 vs. uniprot
Match: A0A835T669_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T669_9CHLO) HSP 1 Score: 280 bits (716), Expect = 3.400e-88 Identity = 139/282 (49.29%), Postives = 179/282 (63.48%), Query Frame = 1
Query: 40 TGPTIAGGLFHTCAVLSDLSLKCFGGGSALGVADLEPTSSVEDGFGNFGQLGTGNNETLGDEEDEMSSNLPEVDLG-GNTVLQVAAGQSHTCVLLASGDVACWGFNEYGQLGLGDTEHRGNSSSDMGEGLAVVDLGSGRTATHIACGQHHTCAILDIGSLKCWGYNSYGALGLGDTDNRGETNDTMGDYLPSVDLGTGHTALAVAGGRHHTCAILNNQALKCWGAKNDTTSNYGQLGQGNTDAIGIAPGQMGDNLPEVDLGTNRTAVALETGWYHTCVILDN 882
T I+ G HTCA+L + S+KC+G + N GQLG G+ + GD EM LP + LG G T ++ G HTC LL +G V CWG+N YGQLGLGDT RG+ +MG+ L + LG+GRTA I+ G +HTCA+LD GS+KCWGYN+YG LGLGDT +RG+ MGD LP++ LGTG TA A++ G +HTCA+L+N ++KCWGA + GQLG G+T PG+MGD LP V LGT RTA A+ G+YHTC +LDN
Sbjct: 103 TATAISAGFLHTCALLDNGSIKCWG-------------------YNNAGQLGLGDTSSRGDGPGEMGDTLPAITLGTGRTATAISVGGIHTCALLDNGSVKCWGYNAYGQLGLGDTSDRGDGPGEMGDTLPAITLGTGRTAAAISVGGYHTCALLDNGSIKCWGYNAYGQLGLGDTSSRGDGPGEMGDTLPAITLGTGRTAKAISAGGYHTCALLDNGSVKCWGANGN-----GQLGLGDTSYRSDGPGEMGDTLPAVVLGTGRTATAISAGYYHTCALLDN 360
BLAST of mRNA_Ecto-sp13_S_contig9134.20701.1 vs. uniprot
Match: A0A150G0E4_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G0E4_GONPE) HSP 1 Score: 255 bits (652), Expect = 1.060e-80 Identity = 127/232 (54.74%), Postives = 157/232 (67.67%), Query Frame = 1
Query: 190 LGTGNNETLGDEEDEMSSNLPEVDLG-GNTVLQVAAGQSHTCVLLASGDVACWGFNEYGQLGLGDTEHRGNSSSDMGEGLAVVDLGSGRTATHIACGQHHTCAILDIGSLKCWGYNSYGALGLGDTDNRGETNDTMGDYLPSVDLGTGHTALAVAGGRHHTCAILNNQALKCWGAKNDTTSNYGQLGQGNTDAIGIAPGQMGDNLPEVDLGTNRTAVALETGWYHTCVILDN 882
+G G+ T GD EM NLP VDLG G T + +AAG HTC +L + V CWG GQLG GDT +RG++ +MG+ L VDLG+GRTA +A G +HTCA+LD G KCWG+N+ LG GDT+NRG+ MGD LP VDLGTG TA+A+AGG HTCA+L+N KCWG S+ GQLG G+T G PG+MGD+LP VDLGT RTAV + G YH+C +LDN
Sbjct: 1 MGYGDTNTRGDNPGEMGDNLPFVDLGTGRTAVAMAAGAYHTCAILDTARVKCWGRAANGQLGYGDTNNRGDNPGEMGDNLPFVDLGTGRTAVVLAGGHYHTCAVLDNGRAKCWGWNNAAQLGYGDTNNRGDNPGEMGDSLPFVDLGTGRTAVAMAGGELHTCAVLDNGRAKCWGV-----SSLGQLGYGDTSIRGDNPGEMGDSLPYVDLGTGRTAVVITAGTYHSCAVLDN 227
BLAST of mRNA_Ecto-sp13_S_contig9134.20701.1 vs. uniprot
Match: A0A0K1E936_CHOCO (Uncharacterized protein n=1 Tax=Chondromyces crocatus TaxID=52 RepID=A0A0K1E936_CHOCO) HSP 1 Score: 263 bits (673), Expect = 1.640e-80 Identity = 135/278 (48.56%), Postives = 175/278 (62.95%), Query Frame = 1
Query: 52 IAGGLFHTCAVLSDLSLKCFGGGSALGVADLEPTSSVEDGFGNFGQLGTGNNETLGDEEDEMSSNLPEVDLG-GNTVLQVAAGQSHTCVLLASGDVACWGFNEYGQLGLGDTEHRGNSSSDMGEGLAVVDLGSGRTATHIACGQHHTCAILDIGSLKCWGYNSYGALGLGDTDNRGETNDTMGDYLPSVDLGTGHTALAVAGGRHHTCAILNNQALKCWGAKNDTTSNYGQLGQGNTDAIGIAPGQMGDNLPEVDLGTNRTAVALETGWYHTCVILDN 882
+A G HTCA+L D ++KC+G +A G+LG G+ GD EM ++LP VDLG G + +AAG SHTC LLA G + CWG N +G+LGLGDT HRG+ +MG+ L VDLG+GRTAT + G H CA+LD GS+KCWG G LGLGDT +RG N MGD LP+VDLGTG TA A++ G HTC +L++ ++KCWG ++ GQLG G+ G PG+MG+ LP V LG RTA A+ TG+ HTC +LD+
Sbjct: 175 VAPGELHTCALLGDGTVKCWGANTA-------------------GRLGLGDTAHRGDGAGEMGASLPAVDLGTGELAVAIAAGGSHTCALLAGGSIKCWGSNSFGELGLGDTAHRGDEPGEMGDALPAVDLGTGRTATALTVGYRHACALLDDGSVKCWGSGQNGRLGLGDTASRGNGNGQMGDLLPTVDLGTGRTAKAISAGAFHTCVVLDDDSVKCWGV-----NSRGQLGLGDMLLRGDEPGEMGNALPVVALGAGRTAKAITTGYEHTCALLDD 428
BLAST of mRNA_Ecto-sp13_S_contig9134.20701.1 vs. uniprot
Match: A0A520PN85_9PROT (Big_5 domain-containing protein (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A520PN85_9PROT) HSP 1 Score: 259 bits (663), Expect = 7.750e-79 Identity = 140/285 (49.12%), Postives = 182/285 (63.86%), Query Frame = 1
Query: 31 TTPTGPTIAGGLFHTCAVLSDLSLKCFGGGSALGVADLEPTSSVEDGFGNFGQLGTGNNETLGDEEDEMSSNLPEVDLG-GNTVLQVAAGQSHTCVLLASGDVACWGFNEYGQLGLGDTEHRGNSSSDMGEGLAVVDLGSGRTATHIACGQHHTCAILDIGSLKCWGYNSYGALGLGDTDNRGETNDTMGDYLPSVDLGTGHTALAVAGGRHHTCAILNNQALKCWGAKNDTTSNYGQLGQGNTDAIGIAPGQMGDNLPEVDLGTNRTAVALETGWYHTCVILDN 882
T+ T PT AG +HTC +L + S+KC+G + GQLG G+ + GD +EM +NL VDLG G T +AA + TC +L + + CWG N+ GQLG G+T G++ S+MG+ L +DLG+GRTAT IA G H CAILD S+KCWG NS G LG+G TD+RG+ + MGD LPS+DLGTG TA A+A G H+CAIL+N A+KCWG KND GQLG G+T+ G +MGD+L VDLGT RTAV++ G+ HTC +LDN
Sbjct: 183 TSTTFPTTAGA-YHTCTILENSSVKCWGKNDS-------------------GQLGLGDTNSRGDGANEMGANLSSVDLGTGRTAKAIAANRVATCAILDNSSIKCWGKNDRGQLGQGNTNSLGDAGSEMGDNLTPIDLGTGRTATAIAGGGWHNCAILDNSSIKCWGINSAGQLGIGSTDDRGDGANEMGDNLPSIDLGTGRTATAIAAGGAHSCAILDNSAVKCWG-KNDA----GQLGLGDTNNRGDGADEMGDDLDAVDLGTGRTAVSITAGYAHTCALLDN 442
BLAST of mRNA_Ecto-sp13_S_contig9134.20701.1 vs. uniprot
Match: A0A835T094_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T094_9CHLO) HSP 1 Score: 266 bits (681), Expect = 2.050e-77 Identity = 139/279 (49.82%), Postives = 173/279 (62.01%), Query Frame = 1
Query: 49 TIAGGLFHTCAVLSDLSLKCFGGGSALGVADLEPTSSVEDGFGNFGQLGTGNNETLGDEEDEMSSNLPEVDLG-GNTVLQVAAGQSHTCVLLASGDVACWGFNEYGQLGLGDTEHRGNSSSDMGEGLAVVDLGSGRTATHIACGQHHTCAILDIGSLKCWGYNSYGALGLGDTDNRGETNDTMGDYLPSVDLGTGHTALAVAGGRHHTCAILNNQALKCWGAKNDTTSNYGQLGQGNTDAIGIAPGQMGDNLPEVDLGTNRTAVALETGWYHTCVILDN 882
TI+ G HTCA+L + S+KC+G + GQLG G+ GD EM LP V LG G T ++ G HTC LL +G V CWG+N+YG LGLGDT RGN +MG+ L V LG+GRTAT I+ G HTCA+LD GS+KCWG+N +G LGLGDT RG+ MGD LP+V LGTG TA A++ G HTCA+L+N ++KCWG ++YG LG G+T G PG+MGD LP V LGT RTA A+ G HTC +LDN
Sbjct: 1511 TISAGFKHTCALLDNGSVKCWG-------------------YNYDGQLGLGDTSPRGDGPGEMGDTLPAVALGTGRTATAISVGSWHTCALLDNGSVKCWGYNDYGYLGLGDTSRRGNELGEMGDRLPAVALGTGRTATAISAGGWHTCALLDNGSVKCWGWNQFGQLGLGDTSPRGDGPGEMGDTLPAVALGTGRTATAISAGVLHTCALLDNGSVKCWGC-----NDYGYLGLGDTSPRGDGPGEMGDTLPAVALGTGRTATAIFAGVLHTCALLDN 1765
BLAST of mRNA_Ecto-sp13_S_contig9134.20701.1 vs. uniprot
Match: A0A6I3AX41_9ACTN (Uncharacterized protein n=3 Tax=root TaxID=1 RepID=A0A6I3AX41_9ACTN) HSP 1 Score: 254 bits (649), Expect = 8.380e-77 Identity = 135/288 (46.88%), Postives = 174/288 (60.42%), Query Frame = 1
Query: 22 DSSTTPTGPTIAGGLFHTCAVLSDLSLKCFGGGSALGVADLEPTSSVEDGFGNFGQLGTGNNETLGDEEDEMSSNLPEVDLG-GNTVLQVAAGQSHTCVLLASGDVACWGFNEYGQLGLGDTEHRGNSSSDMGEGLAVVDLGSGRTATHIACGQHHTCAILDIGSLKCWGYNSYGALGLGDTDNRGETNDTMGDYLPSVDLGTGHTALAVAGGRHHTCAILNNQALKCWGAKNDTTSNYGQLGQGNTDAIGIAPGQMGDNLPEVDLGTNRTAVALETGWYHTCVILDN 882
D T T + G HTCA+L + ++KC+G G+LG G+ + GD EM NLP VDLG G T + AG HTC +L + V CWG N++G+LGLGDT HRG+++S+MG+ L VDLG+GR A ++ H+C +LD ++KCWGYN LGLGDTDNRG+ + MGD LP+VDLGTG TA AV+ G TC+IL+N +KCWG S GQLG G+T+ G G+MGDNL VDLGT RTA A+ G H C +LDN
Sbjct: 199 DLGTGRTALALTSGRDHTCALLDNHTVKCWG-------------------LNEIGELGYGDTDNRGDNASEMGDNLPTVDLGTGRTAKAINAGMWHTCAILDNDTVKCWGKNDHGELGLGDTSHRGDNASEMGDNLPTVDLGTGRIAKVMSSAGVHSCVLLDNNTIKCWGYNGNADLGLGDTDNRGDNSSEMGDSLPAVDLGTGRTAKAVSSGGGGTCSILDNDTVKCWGY-----SAQGQLGYGDTNNRGDVGGEMGDNLLAVDLGTGRTASAIWYGDLHVCALLDN 462
BLAST of mRNA_Ecto-sp13_S_contig9134.20701.1 vs. uniprot
Match: A0A7C1YRK2_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YRK2_9ACTN) HSP 1 Score: 255 bits (651), Expect = 2.180e-76 Identity = 132/288 (45.83%), Postives = 175/288 (60.76%), Query Frame = 1
Query: 22 DSSTTPTGPTIAGGLFHTCAVLSDLSLKCFGGGSALGVADLEPTSSVEDGFGNFGQLGTGNNETLGDEEDEMSSNLPEVDLG-GNTVLQVAAGQSHTCVLLASGDVACWGFNEYGQLGLGDTEHRGNSSSDMGEGLAVVDLGSGRTATHIACGQHHTCAILDIGSLKCWGYNSYGALGLGDTDNRGETNDTMGDYLPSVDLGTGHTALAVAGGRHHTCAILNNQALKCWGAKNDTTSNYGQLGQGNTDAIGIAPGQMGDNLPEVDLGTNRTAVALETGWYHTCVILDN 882
D T T ++ G HTCA+L + ++KC+G G + G+LG G+ +T+GD E LP VDLG G T +AAGQ +TC LL G V CWG N GQLG G+T+ G++ +MG+ L VDLG+GRTAT I+ G HTCA+LD G++KCWG S+G LG GD RG+ MGD LP ++LGTG TA AV+ G HTCA+L++ +KCWG GQLG G+ +G PG+MGDNLP VDLG+ RTA+A+ G +C +LD+
Sbjct: 104 DLGTGRTATAVSAGWLHTCALLDNGTVKCWGNGGS-------------------GRLGQGSTDTIGDSTAERGDGLPTVDLGTGRTATAIAAGQQYTCALLDDGTVKCWGNNSSGQLGQGNTDDIGDNPGEMGDNLPAVDLGTGRTATAISAGSSHTCALLDDGTVKCWGSGSFGRLGYGDLTKRGDGAGEMGDNLPPLELGTGRTATAVSAGNTHTCALLDDGTVKCWGG-----GFNGQLGTGDVTGLGDNPGEMGDNLPPVDLGSGRTAIAIAAGSRASCAVLDD 367
BLAST of mRNA_Ecto-sp13_S_contig9134.20701.1 vs. uniprot
Match: A0A7C1UEQ2_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1UEQ2_9ACTN) HSP 1 Score: 252 bits (644), Expect = 3.210e-76 Identity = 141/287 (49.13%), Postives = 168/287 (58.54%), Query Frame = 1
Query: 55 AGGLFHTCAVLSDLSLKCFGGGSALGVADLEPTSSVEDGFGNFGQLGTGNNETLGDEEDEMSSNLPEVDLG-GNTVLQVAAGQSHTCVLLASGDVACWGFNEYGQLGLGDTEHR-GNSSSDMGEGLAVVDLGSGRTATHIACGQHHTCAILDIGSLKCWGYNSYGALGLGDTDNRGETNDTMGDYLPSVDLGTGHTALAVAGGRHHTCAILNNQALKCWGAKNDTTSNYG------QLGQGNTDAIGIAPGQMGDNLPEVDLGTNRTAVALETGWYHTCVILDNKEL 891
A G HTCA+ SD L+C+G S FGQLG GN T+GD EM SNLP +DLG G T + V G TC LL G V CWG N +G LG+G ++ G +MG+ L +DLG+GRTA I+ G HTCA+LD LKCWG+N+ G LG GD+ RG D MGD LP +DLGTG TA+AV+ G TCAIL+N LKCWGA + G G G+ IG APG+MGDNLP VDLGT RTAVA+ H C ILDN EL
Sbjct: 50 AAGSGHTCAIDSDAQLRCWGAAS-------------------FGQLGQGNQNTIGDGPGEMGSNLPPIDLGTGRTTVAVGVGSGFTCALLDDGSVKCWGDNPFGILGIGKSQGSVGAHPDEMGDNLPPIDLGTGRTAVAISVGGGHTCALLDNHDLKCWGFNTAGGLGQGDSLIRGGDPDEMGDNLPPIDLGTGRTAVAVSAGGGTTCAILDNGDLKCWGANREGQMGQGYKASSLNFGPGSELHIGDAPGEMGDNLPPVDLGTGRTAVAVSASSRHICAILDNGEL 317 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9134.20701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9134.20701.1 >prot_Ecto-sp13_S_contig9134.20701.1 ID=prot_Ecto-sp13_S_contig9134.20701.1|Name=mRNA_Ecto-sp13_S_contig9134.20701.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=298bp SFLVEVADSSTTPTGPTIAGGLFHTCAVLSDLSLKCFGGGSALGVADLEPback to top mRNA from alignment at Ecto-sp13_S_contig9134:188..4840- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9134.20701.1 ID=mRNA_Ecto-sp13_S_contig9134.20701.1|Name=mRNA_Ecto-sp13_S_contig9134.20701.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4653bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9134:188..4840- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9134:188..4840- >mRNA_Ecto-sp13_S_contig9134.20701.1 ID=mRNA_Ecto-sp13_S_contig9134.20701.1|Name=mRNA_Ecto-sp13_S_contig9134.20701.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=894bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9134:188..4840- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |