prot_Ecto-sp13_S_contig91303.20697.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig91303.20697.1
Unique Nameprot_Ecto-sp13_S_contig91303.20697.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length57
Homology
BLAST of mRNA_Ecto-sp13_S_contig91303.20697.1 vs. uniprot
Match: D8LS34_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS34_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 4.090e-31
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0
Query:    1 MEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSN 57
            MEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSN
Sbjct:  165 MEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSN 221          
BLAST of mRNA_Ecto-sp13_S_contig91303.20697.1 vs. uniprot
Match: A0A812WQK0_SYMMI (Vps26 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WQK0_SYMMI)

HSP 1 Score: 106 bits (264), Expect = 3.490e-28
Identity = 48/57 (84.21%), Postives = 54/57 (94.74%), Query Frame = 0
Query:    1 MEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSN 57
            MEVGIEDCLHIEFEYDK  YHL+DVV+GKIYFLLVRIKIKHME+A+IRRE+AG+G N
Sbjct:    1 MEVGIEDCLHIEFEYDKQKYHLKDVVLGKIYFLLVRIKIKHMELAVIRRESAGSGQN 57          
BLAST of mRNA_Ecto-sp13_S_contig91303.20697.1 vs. uniprot
Match: A0A7S1ADW5_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1ADW5_NOCSC)

HSP 1 Score: 110 bits (274), Expect = 7.400e-28
Identity = 50/57 (87.72%), Postives = 55/57 (96.49%), Query Frame = 0
Query:    1 MEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSN 57
            MEVGIEDCLHIEFEYDKS YHL+DV++GK+YFLLVRIKIKHME+ IIRRETAGTGSN
Sbjct:  179 MEVGIEDCLHIEFEYDKSKYHLKDVIVGKVYFLLVRIKIKHMELNIIRRETAGTGSN 235          
BLAST of mRNA_Ecto-sp13_S_contig91303.20697.1 vs. uniprot
Match: W7TAJ9_9STRA (Vacuolar protein sorting-associated protein 26 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAJ9_9STRA)

HSP 1 Score: 108 bits (269), Expect = 3.100e-27
Identity = 49/57 (85.96%), Postives = 55/57 (96.49%), Query Frame = 0
Query:    1 MEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSN 57
            MEVGIEDCLHIEFEYDK  YHL+DV++GKIYFLLVRIKIKHME+AIIRRE+AGTG+N
Sbjct:  167 MEVGIEDCLHIEFEYDKQKYHLKDVILGKIYFLLVRIKIKHMELAIIRRESAGTGAN 223          
BLAST of mRNA_Ecto-sp13_S_contig91303.20697.1 vs. uniprot
Match: M5EBU3_MALS4 (Uncharacterized protein n=1 Tax=Malassezia sympodialis (strain ATCC 42132) TaxID=1230383 RepID=M5EBU3_MALS4)

HSP 1 Score: 102 bits (254), Expect = 4.950e-27
Identity = 46/57 (80.70%), Postives = 53/57 (92.98%), Query Frame = 0
Query:    1 MEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSN 57
            MEVGIEDCLHIEFEY+KS YHL+DV++GKIYFLLVRIKIKHME++IIRRET G+  N
Sbjct:    1 MEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMELSIIRRETTGSAPN 57          
BLAST of mRNA_Ecto-sp13_S_contig91303.20697.1 vs. uniprot
Match: A0A6S7K6Z2_PARCT (Vacuolar sorting-associated 26B-like (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7K6Z2_PARCT)

HSP 1 Score: 105 bits (263), Expect = 7.560e-27
Identity = 48/57 (84.21%), Postives = 54/57 (94.74%), Query Frame = 0
Query:    1 MEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSN 57
            MEVGIEDCLHIEFEY+KS YHL+DV++GKIYFLLVRIKIKHME+AII+RET GTG N
Sbjct:  164 MEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEVAIIKRETTGTGPN 220          
BLAST of mRNA_Ecto-sp13_S_contig91303.20697.1 vs. uniprot
Match: D0NHV5_PHYIT (Vacuolar protein sorting-associated protein 26B-A n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NHV5_PHYIT)

HSP 1 Score: 103 bits (256), Expect = 1.370e-26
Identity = 47/56 (83.93%), Postives = 54/56 (96.43%), Query Frame = 0
Query:    1 MEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGS 56
            MEVGIEDCLHIEFEYDKS YHL+DVVIGKI+FLLVRIKIKHME+AI+RRE+ G+G+
Sbjct:   33 MEVGIEDCLHIEFEYDKSRYHLKDVVIGKIFFLLVRIKIKHMELAILRRESVGSGT 88          
BLAST of mRNA_Ecto-sp13_S_contig91303.20697.1 vs. uniprot
Match: A0A2G9QKZ8_LITCT (Uncharacterized protein (Fragment) n=2 Tax=Lithobates catesbeianus TaxID=8400 RepID=A0A2G9QKZ8_LITCT)

HSP 1 Score: 103 bits (257), Expect = 1.420e-26
Identity = 47/57 (82.46%), Postives = 53/57 (92.98%), Query Frame = 0
Query:    1 MEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSN 57
            MEVGIEDCLHIEFEY+KS YHL+DV++GKIYFLLVRIKIKHME+ II+RET GTG N
Sbjct:    1 MEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEIDIIKRETTGTGPN 57          
BLAST of mRNA_Ecto-sp13_S_contig91303.20697.1 vs. uniprot
Match: A0A7M5WYV7_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5WYV7_9CNID)

HSP 1 Score: 106 bits (265), Expect = 1.560e-26
Identity = 48/57 (84.21%), Postives = 55/57 (96.49%), Query Frame = 0
Query:    1 MEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSN 57
            MEVGIEDCLHIEFEY+KS YHL+DV++GKIYFLLVRIKI+HME+AII+RETAGTG N
Sbjct:  164 MEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIRHMELAIIKRETAGTGPN 220          
BLAST of mRNA_Ecto-sp13_S_contig91303.20697.1 vs. uniprot
Match: A0A7J6AIX0_AMEME (Uncharacterized protein n=2 Tax=Ameiurus melas TaxID=219545 RepID=A0A7J6AIX0_AMEME)

HSP 1 Score: 103 bits (257), Expect = 1.780e-26
Identity = 47/57 (82.46%), Postives = 53/57 (92.98%), Query Frame = 0
Query:    1 MEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSN 57
            MEVGIEDCLHIEFEY+KS YHL+DV++GKIYFLLVRIKIKHME+ II+RET GTG N
Sbjct:   66 MEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEIDIIKRETTGTGPN 122          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig91303.20697.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS34_ECTSI4.090e-31100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A812WQK0_SYMMI3.490e-2884.21Vps26 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A7S1ADW5_NOCSC7.400e-2887.72Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
W7TAJ9_9STRA3.100e-2785.96Vacuolar protein sorting-associated protein 26 n=2... [more]
M5EBU3_MALS44.950e-2780.70Uncharacterized protein n=1 Tax=Malassezia sympodi... [more]
A0A6S7K6Z2_PARCT7.560e-2784.21Vacuolar sorting-associated 26B-like (Fragment) n=... [more]
D0NHV5_PHYIT1.370e-2683.93Vacuolar protein sorting-associated protein 26B-A ... [more]
A0A2G9QKZ8_LITCT1.420e-2682.46Uncharacterized protein (Fragment) n=2 Tax=Lithoba... [more]
A0A7M5WYV7_9CNID1.560e-2684.21Uncharacterized protein n=1 Tax=Clytia hemisphaeri... [more]
A0A7J6AIX0_AMEME1.780e-2682.46Uncharacterized protein n=2 Tax=Ameiurus melas Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028934Vacuolar protein sorting protein 26 relatedPFAMPF03643Vps26coord: 1..57
e-value: 2.2E-29
score: 102.4
IPR028934Vacuolar protein sorting protein 26 relatedPANTHERPTHR12233VACUOLAR PROTEIN SORTING 26 RELATEDcoord: 1..57
IPR014752Arrestin, C-terminalGENE3D2.60.40.640coord: 1..57
e-value: 2.8E-27
score: 97.0
NoneNo IPR availablePANTHERPTHR12233:SF1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 26coord: 1..57
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig91303contigEcto-sp13_S_contig91303:6..454 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig91303.20697.1mRNA_Ecto-sp13_S_contig91303.20697.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig91303 6..478 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig91303.20697.1 ID=prot_Ecto-sp13_S_contig91303.20697.1|Name=mRNA_Ecto-sp13_S_contig91303.20697.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=57bp
MEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRE
TAGTGSN
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028934Vps26-related
IPR014752Arrestin_C