prot_Ecto-sp13_S_contig913.20696.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig913.20696.1
Unique Nameprot_Ecto-sp13_S_contig913.20696.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length498
Homology
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BLAST of mRNA_Ecto-sp13_S_contig913.20696.1 vs. uniprot
Match: D7G8Y0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Y0_ECTSI)

HSP 1 Score: 402 bits (1034), Expect = 5.970e-131
Identity = 370/386 (95.85%), Postives = 371/386 (96.11%), Query Frame = 0 
Query:    8 GPGGAGGGRAPSRWDALKPDRERDRGYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGLHDGGLGAHDRAVAHEKAIAAGGAXXXXXXXXXXXXXXXXXXXXXXRYGGTSEADIWDMPTTLPGDGGATKEPPKNTRAAGLRSADRERREENRKKDEAAAFERERLEFERERAKVLQGRDGGKANGGPAEFPDMGGGFLGGGIGXXXXXXXXXXXXXXXXXXXXXXXXGGSGSGSQDQPQQLGKNQSVLDRLFGAGAGAPAAVDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPGGGLFSFMAPGNSISTIDKFTEATRGKGNAKIFSPGTKPAATPWGKVDKKPAANVVNG 393
            GPGGAGGGRAPSRWDALKPDRERDRGYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    DGLHDGGLGAHDRAVAHEKAIAAGGAXXXXXXXXXXXXXXXXXXXXXXRYGGTSEADIWDMPTTLPGDGGATKEPPKNTRAAGLRSADRERREENRKKDEAAAFERERLEFERERAKVLQGRDGGKANGGPAEFPDMGGGFLGGGIG XXXXXXXXXXXXXXXXXXXXXXX GSGSGSQDQPQ L KNQSVLDR+FGAGAGA      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPGGGLFSFMAPGNSISTIDKFTEATRGKGNAKIFSPGTKPAATPWGKVDKKP ANVVNG
Sbjct:  183 GPGGAGGGRAPSRWDALKPDRERDRGYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----DGLHDGGLGAHDRAVAHEKAIAAGGAXXXXXXXXXXXXXXXXXXXXXXRYGGTSEADIWDMPTTLPGDGGATKEPPKNTRAAGLRSADRERREENRKKDEAAAFERERLEFERERAKVLQGRDGGKANGGPAEFPDMGGGFLGGGIGDXXXXXXXXXXXXXXXXXXXXXXXXGSGSGSQDQPQ-LVKNQSVLDRVFGAGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPGGGLFSFMAPGNSISTIDKFTEATRGKGNAKIFSPGTKPAATPWGKVDKKPTANVVNG 563
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig913.20696.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8Y0_ECTSI5.970e-13195.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 177..204
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 430..448
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 454..477
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..429
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 478..497
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 449..453
NoneNo IPR availableTMHMMTMhelixcoord: 455..477
NoneNo IPR availableTMHMMTMhelixcoord: 431..450

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig913contigEcto-sp13_S_contig913:16093..20356 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig913.20696.1mRNA_Ecto-sp13_S_contig913.20696.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig913 16093..20356 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig913.20696.1 ID=prot_Ecto-sp13_S_contig913.20696.1|Name=mRNA_Ecto-sp13_S_contig913.20696.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=498bp
RRDRPRDGPGGAGGGRAPSRWDALKPDRERDRGYNNRNNRDDEDGGGRGG
VGQDARAGGGRDRDRRNGRDRDRDRDRDRDVGDRDRGGGGDGLHDGGLGA
HDRAVAHEKAIAAGGAGAAAAAAAAAGTNRDRAGAGRGRYGGTSEADIWD
MPTTLPGDGGATKEPPKNTRAAGLRSADRERREENRKKDEAAAFERERLE
FERERAKVLQGRDGGKANGGPAEFPDMGGGFLGGGIGDDNDDNGLLGGIE
DDQPPSPPPRKGGSGSGSQDQPQQLGKNQSVLDRLFGAGAGAPAAVDGGG
GSDSGGQKGGTGPAETGGGGGGGGAAAGGGGGGFPGGGLFSFMAPGNSIS
TIDKFTEATRGKGNAKIFSPGTKPAATPWGKVDKKPAANVVNGGGGGDGG
GGGGGGGGGGDAPPAAALTAAEKGALLKRMIMVGVVIVLLVAPPLSWLGY
PLCWVRVLLLMLLMSRVCVCVCVCVVFERVRFCSQRCSYSALSHGSF*
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