prot_Ecto-sp13_S_contig9122.20685.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9122.20685.1
Unique Nameprot_Ecto-sp13_S_contig9122.20685.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length375
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9122.20685.1 vs. uniprot
Match: A0A6H5K899_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K899_9PHAE)

HSP 1 Score: 605 bits (1561), Expect = 3.040e-215
Identity = 320/366 (87.43%), Postives = 333/366 (90.98%), Query Frame = 0 
Query:    1 MMTMMGDREAIAPPACVMPRTANTASASREGGGVVIWASATVKAGNLLLLLLLAGWTITATAAIQPYTLEVRTCNETNAGSLDEVHLSFCDGGEGDCIMGPENVYNSMAELAEIGTRATFEIPLAYEPTAMSMSIVGIDAWCFDEAIWNGGTNLLGSGARVYLDGDLGKKGCNYGVHFDTGWFYPCQSSWRFFNLPGSDDYEYEIKVKPCGSATSSXXXXXXXXXXXXXVAATEPSVSARILASLCSESECDETAGEVVNVTLAAEPAHRNGXXXXXXXXXXXXXXDWAATRTPAAFNPVAMRLTNVGDFPWCAEEVAFNEYTLVNRYASPYGMKLGVGDDRLFFNVQSLGLLEGASSEDPAGSDD 366
            MMTMMGDR+AIAPPACVMPRTANTASAS EG GVV+ ASATVKAGNLLLLLLLAGWTITATAAIQP+TLEVRTCNETNAGSLDEVHLSFCDGG  DC+MGPENVYNS+AELAEIGT   FEIPLA+EPTAMSMS+VGIDAWCFDE IWNGGTNLLGSG RVYLDGDLGKKGCNYGVHFDTGWFYPCQSSWRFFNL GSDDYEYEIKVKPCGSATSS XXXXXXXXXXXX        S+RILASLCSESECDET GEVVNVTLAAEP+HR+GXXXXXX        DWA TRTPA FNPVAMRLTNVGDFPWCAEEVAFNEYTLVNR+ASP+GMKLGVGDDRLFFNVQSLGLL GASS+DP GSDD
Sbjct:   68 MMTMMGDRKAIAPPACVMPRTANTASASWEGSGVVVRASATVKAGNLLLLLLLAGWTITATAAIQPFTLEVRTCNETNAGSLDEVHLSFCDGGGDDCVMGPENVYNSVAELAEIGTWTPFEIPLAFEPTAMSMSMVGIDAWCFDEVIWNGGTNLLGSGGRVYLDGDLGKKGCNYGVHFDTGWFYPCQSSWRFFNLQGSDDYEYEIKVKPCGSATSSGXXXXXXXXXXXXXX-XXXXXSSRILASLCSESECDETVGEVVNVTLAAEPSHRHGXXXXXXTSRAGSGGDWATTRTPATFNPVAMRLTNVGDFPWCAEEVAFNEYTLVNRFASPHGMKLGVGDDRLFFNVQSLGLLAGASSDDPGGSDD 432
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BLAST of mRNA_Ecto-sp13_S_contig9122.20685.1 vs. uniprot
Match: D7G1J9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J9_ECTSI)

HSP 1 Score: 580 bits (1494), Expect = 1.710e-203
Identity = 307/358 (85.75%), Postives = 316/358 (88.27%), Query Frame = 0 
Query:   18 MPRTANTASASREGGGVVIWASATVKAGNLLLLLLLAGWTITATAAIQPYTLEVRTCNETNAGSLDEVHLSFCDGGEGDCIMGPENVYNSMAELAEIGTRATFEIPLAYEPTAMSMSIVGIDAWCFDEAIWNGGTNLLGSGARVYLDGDLGKKGCNYGVHFDTGWFYPCQSSWRFFNLPGSDDYEYEIKVKPCGSATSSXXXXXXXXXXXXXVAATEPSVSARILASLCSESECDETAGEVVNVTLAAEPAHRNGXXXXXXXXXXXXXXDWAATRTPAAFNPVAMRLTNVGDFPWCAEEVAFNEYTLVNRYASPYGMKLGVGDDRLFFNVQSLGLLEGASSEDPAGSDDDDIKGEAWE 375
            MPRTANTASASR+GGGVV+  SATVKAG+L LLLLLAGWT  ATAAIQPYTLEVRT N TNAGSLDEVHLSFCDGG  DC+MGPENVYNSMAELAEIGTRATFEIPLAYEPTAMS+SIVGIDAWCFDEAIWNGGTNLLGSGARVYLDGDLG+KGCNYGVHFDTGWFYPCQS WRFFNLPGSDDYEYEIKVKPC SAT S              A  E S S +ILASLCSESECDETAGEVVNVTLAAEPA   GXXXXXXXXXXXXXXDWA TRTPA FNPVAMRLTNVGD PWCAEEVAFNEYTLVNRYASP+GMKL VGDDRLFFNVQSLGLL G SS+DP GSDDD IKGEAWE
Sbjct:    1 MPRTANTASASRKGGGVVVRVSATVKAGSLFLLLLLAGWTFPATAAIQPYTLEVRTRNATNAGSLDEVHLSFCDGGGDDCVMGPENVYNSMAELAEIGTRATFEIPLAYEPTAMSISIVGIDAWCFDEAIWNGGTNLLGSGARVYLDGDLGEKGCNYGVHFDTGWFYPCQSRWRFFNLPGSDDYEYEIKVKPCDSATPSGSASLSQQEEEA-AAVRESSASTKILASLCSESECDETAGEVVNVTLAAEPAQ--GXXXXXXXXXXXXXXDWATTRTPATFNPVAMRLTNVGDLPWCAEEVAFNEYTLVNRYASPHGMKLDVGDDRLFFNVQSLGLLAGDSSDDPGGSDDDYIKGEAWE 355
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9122.20685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K899_9PHAE3.040e-21587.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1J9_ECTSI1.710e-20385.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..56
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..375
NoneNo IPR availableTMHMMTMhelixcoord: 47..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9122contigEcto-sp13_S_contig9122:2..5110 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9122.20685.1mRNA_Ecto-sp13_S_contig9122.20685.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9122 2..5116 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9122.20685.1 ID=prot_Ecto-sp13_S_contig9122.20685.1|Name=mRNA_Ecto-sp13_S_contig9122.20685.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=375bp
MMTMMGDREAIAPPACVMPRTANTASASREGGGVVIWASATVKAGNLLLL
LLLAGWTITATAAIQPYTLEVRTCNETNAGSLDEVHLSFCDGGEGDCIMG
PENVYNSMAELAEIGTRATFEIPLAYEPTAMSMSIVGIDAWCFDEAIWNG
GTNLLGSGARVYLDGDLGKKGCNYGVHFDTGWFYPCQSSWRFFNLPGSDD
YEYEIKVKPCGSATSSGSSSLSDEEEAAAVAATEPSVSARILASLCSESE
CDETAGEVVNVTLAAEPAHRNGGGGGGRTSRAGGGGDWAATRTPAAFNPV
AMRLTNVGDFPWCAEEVAFNEYTLVNRYASPYGMKLGVGDDRLFFNVQSL
GLLEGASSEDPAGSDDDDIKGEAWE
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