prot_Ecto-sp13_S_contig1249.2067.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1249.2067.1
Unique Nameprot_Ecto-sp13_S_contig1249.2067.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length336
Homology
BLAST of mRNA_Ecto-sp13_S_contig1249.2067.1 vs. uniprot
Match: D8LRD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRD0_ECTSI)

HSP 1 Score: 278 bits (710), Expect = 1.250e-87
Identity = 155/181 (85.64%), Postives = 158/181 (87.29%), Query Frame = 0
Query:    1 VLSAVAFKSQVVVRSLMAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLYGKTMTTSLQQGRVRAWAGSFNTSRSSSCGRGRASSSSLERPRCPSWRSTCTSTTSRWGSSVWLRGRPS 181
            VLSAVAFKSQV+VRSL+AFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLYGKTMTTSLQ G    W  S NT RSS  G G  SSSS  RPRCPSWRS CTSTT + G S W RG PS
Sbjct:   38 VLSAVAFKSQVLVRSLVAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLYGKTMTTSLQGGST-GWGSSTNTFRSSFWGGGPTSSSSPGRPRCPSWRSPCTSTTFQRGFSGWGRGPPS 217          
BLAST of mRNA_Ecto-sp13_S_contig1249.2067.1 vs. uniprot
Match: A0A6H5JH19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH19_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 1.910e-64
Identity = 118/122 (96.72%), Postives = 122/122 (100.00%), Query Frame = 0
Query:    1 VLSAVAFKSQVVVRSLMAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLYGKTMTTSLQ 122
            VLSAVAFKSQVVVRSLMAF+LMSTVTALTVRTLLSSGVVI+FP+VMLLERMGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGH+MQMVVFYTVYNACLLAWSYWLYGKTMTTSLQ
Sbjct:  402 VLSAVAFKSQVVVRSLMAFLLMSTVTALTVRTLLSSGVVIIFPVVMLLERMGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHVMQMVVFYTVYNACLLAWSYWLYGKTMTTSLQ 523          
BLAST of mRNA_Ecto-sp13_S_contig1249.2067.1 vs. uniprot
Match: A0A7S3Y6C3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6C3_HETAK)

HSP 1 Score: 125 bits (313), Expect = 1.070e-29
Identity = 63/117 (53.85%), Postives = 86/117 (73.50%), Query Frame = 0
Query:    6 AFKSQVVVRSLMAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLYGKTMTTSLQ 122
            A K   ++ SL+AF LMS+VTAL VR L+SSGVV MFP+   LER GL+G + Q++L LSYPWLG P+E L+ R KP GPF+ GH++++VV+Y +Y A  +AW+ WLYGK+    L+
Sbjct:   59 ALKPLALLSSLLAFFLMSSVTALIVRVLISSGVVFMFPLFSALERAGLRGFN-QRLLRLSYPWLGAPMEELQRRGKPTGPFVAGHLLKVVVYYALYEAAQVAWAQWLYGKSTPAGLE 174          
BLAST of mRNA_Ecto-sp13_S_contig1249.2067.1 vs. uniprot
Match: A0A7S2AJJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AJJ9_9STRA)

HSP 1 Score: 123 bits (308), Expect = 6.590e-29
Identity = 67/125 (53.60%), Postives = 89/125 (71.20%), Query Frame = 0
Query:    8 KSQVVVRSLMAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLYGKTMTTSLQ---QGRVRAW 129
            K+ VV+RSL+AF   STVTAL VR L+SSGVVIMFP++  L  +G   +DMQ +L +SYPWLGLP+E LR +NKPV P I+ H++++VV Y++Y AC LAW  WLY K + + L+    G V  W
Sbjct:   54 KAIVVLRSLLAFFFTSTVTALIVRMLISSGVVIMFPLLTGLRYLGCSAIDMQ-ILNMSYPWLGLPVERLRAQNKPVTPLIVAHMVRVVVLYSMYEACQLAWGIWLYDKPLPSGLELWIYGIVMIW 177          
BLAST of mRNA_Ecto-sp13_S_contig1249.2067.1 vs. uniprot
Match: A0A7S4DCY7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCY7_HETAK)

HSP 1 Score: 125 bits (313), Expect = 1.740e-28
Identity = 63/117 (53.85%), Postives = 86/117 (73.50%), Query Frame = 0
Query:    6 AFKSQVVVRSLMAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLYGKTMTTSLQ 122
            A K   ++ SL+AF LMS+VTAL VR L+SSGVV MFP+   LER GL+G + Q++L LSYPWLG P+E L+ R KP GPF+ GH++++VV+Y +Y A  +AW+ WLYGK+    L+
Sbjct:  247 ALKPLALLSSLLAFFLMSSVTALIVRVLISSGVVFMFPLFSALERAGLRGFN-QRLLRLSYPWLGAPMEELQRRGKPTGPFVAGHLLKVVVYYALYEAAQVAWAQWLYGKSTPAGLE 362          
BLAST of mRNA_Ecto-sp13_S_contig1249.2067.1 vs. uniprot
Match: A0A835YR56_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR56_9STRA)

HSP 1 Score: 117 bits (293), Expect = 3.010e-27
Identity = 58/103 (56.31%), Postives = 78/103 (75.73%), Query Frame = 0
Query:   14 RSLMAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLYGKT 116
            R+L+ F ++S+VTAL VR LLSSGV  MFP   LL RMG   +D  ++LA SYPW+G P++ LR +NKP GPFIM H++Q+VV+YT+YNA  +AW+ WLY K+
Sbjct:   15 RALLTFAVLSSVTALVVRMLLSSGVAAMFPFFALLRRMGFTDLD-DRVLAASYPWIGRPMQALRRQNKPTGPFIMAHLVQVVVYYTLYNAVQVAWTMWLYDKS 116          
BLAST of mRNA_Ecto-sp13_S_contig1249.2067.1 vs. uniprot
Match: A0A7S2SN08_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SN08_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 4.480e-19
Identity = 48/109 (44.04%), Postives = 72/109 (66.06%), Query Frame = 0
Query:   15 SLMAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLYGKTMTTSLQQ 123
            S+++F L+S +TAL VR L++SGV I FP+  L +R+GL     +Q+L+LSYPWLG  IE L   N+   P +  H+  ++++YT+Y AC + WS+WLY K+M     Q
Sbjct:  261 SILSFALVSQITALLVRVLVTSGVAITFPLFNLFQRLGLNQ-HRRQLLSLSYPWLGAQIELLHTSNQSSNPLVSAHLFNVLLYYTMYEACQIVWSFWLYNKSMPAGQMQ 368          
BLAST of mRNA_Ecto-sp13_S_contig1249.2067.1 vs. uniprot
Match: A0A7S0XCD7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XCD7_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 4.770e-19
Identity = 48/109 (44.04%), Postives = 79/109 (72.48%), Query Frame = 0
Query:    5 VAFKSQVVVRSLMAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLY 113
            + F+  V+  S  +F ++ST++AL VR L+SSGVV++FP+  +++R    G+  + +++LSYPW+G+PIE LR+RN+ + PFI+ HI ++VV+Y +Y A  LA+S W Y
Sbjct:  138 ITFRLMVLFVSFFSFFMLSTISALLVRILISSGVVLLFPLFWIVQRFTSHGISWR-IISLSYPWIGIPIEVLRSRNQSIEPFIIAHICRIVVYYVLYEAAQLAFSVWFY 245          
BLAST of mRNA_Ecto-sp13_S_contig1249.2067.1 vs. uniprot
Match: A0A4D9D9V5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9V5_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.610e-14
Identity = 44/114 (38.60%), Postives = 75/114 (65.79%), Query Frame = 0
Query:    8 KSQVVVRSLMAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLYGKTMTTSL 121
            K   +++SL AF  +S  TA+ VR L++SGV +M+P    L R+G +G+ +  +LA SY WLG+P++ L+ R KP+ PF++ H+ +++V Y++Y AC + +   LY K+  + L
Sbjct:  228 KLSALLQSLSAFFFLSGTTAIVVRMLMTSGVALMYPCFFCLRRLGARGLSLG-VLARSYAWLGVPMQRLQARGKPLAPFLLAHLCKVLVLYSMYEACQVFFVETLYAKSGASGL 340          
BLAST of mRNA_Ecto-sp13_S_contig1249.2067.1 vs. uniprot
Match: W7UBT1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBT1_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.650e-14
Identity = 44/114 (38.60%), Postives = 75/114 (65.79%), Query Frame = 0
Query:    8 KSQVVVRSLMAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLYGKTMTTSL 121
            K   +++SL AF  +S  TA+ VR L++SGV +M+P    L R+G +G+ +  +LA SY WLG+P++ L+ R KP+ PF++ H+ +++V Y++Y AC + +   LY K+  + L
Sbjct:  302 KLSALLQSLSAFFFLSGTTAIVVRMLMTSGVALMYPCFFCLRRLGARGLSLG-VLARSYAWLGVPMQRLQARGKPLAPFLLAHLCKVLVLYSMYEACQVFFVETLYAKSGASGL 414          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1249.2067.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D8LRD0_ECTSI1.250e-8785.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JH19_9PHAE1.910e-6496.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3Y6C3_HETAK1.070e-2953.85Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2AJJ9_9STRA6.590e-2953.60Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S4DCY7_HETAK1.740e-2853.85Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835YR56_9STRA3.010e-2756.31Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S2SN08_9STRA4.480e-1944.04Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S0XCD7_9STRA4.770e-1944.04Hypothetical protein (Fragment) n=2 Tax=Chromulina... [more]
A0A4D9D9V5_9STRA1.610e-1438.60Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7UBT1_9STRA1.650e-1438.60Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..113
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 114..336
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 43..94
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..42
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availableTMHMMTMhelixcoord: 91..113
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1249contigEcto-sp13_S_contig1249:1..3085 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1249.2067.1mRNA_Ecto-sp13_S_contig1249.2067.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1249 1..3087 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1249.2067.1 ID=prot_Ecto-sp13_S_contig1249.2067.1|Name=mRNA_Ecto-sp13_S_contig1249.2067.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=336bp
VLSAVAFKSQVVVRSLMAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLER
MGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTV
YNACLLAWSYWLYGKTMTTSLQQGRVRAWAGSFNTSRSSSCGRGRASSSS
LERPRCPSWRSTCTSTTSRWGSSVWLRGRPSSACSLSSSTCCRRSSCRPT
PGERFPRTRPGRTSSSFPMPFPIGRTGGAMREGRQQQQQQQQVGGSQTTA
RRAGERGKNIGFPALAALPREAELELGGGGGLEGSRERSKREGHWSAGTE
MTRKAAAAAVAVPGRRLRWRRGDGTVTAVERGRGPK
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