mRNA_Ecto-sp13_S_contig12484.2063.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12484.2063.1
Unique NamemRNA_Ecto-sp13_S_contig12484.2063.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig12484.2063.1 vs. uniprot
Match: D7FP79_ECTSI (Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP79_ECTSI)

HSP 1 Score: 535 bits (1377), Expect = 6.000e-187
Identity = 262/269 (97.40%), Postives = 266/269 (98.88%), Query Frame = 1
Query:    1 MQVSAQDCWTSGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAAKTAYAQEHGLSVMGCIGESKEERESGATMDVVIGQLKAYAATVKDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKDGSKSVGPVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTHDGEHLIVDGTKIKV 807
            ++VSAQDCWT GNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECA K AYAQEHGLSVMGCIGESKEERESG+TMDVVIGQLKAYAA+VKDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKDGSKSVGPVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTHDGEHLIVDGTKIKV
Sbjct:   59 VKVSAQDCWTGGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAVKAAYAQEHGLSVMGCIGESKEERESGSTMDVVIGQLKAYAASVKDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKDGSKSVGPVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTHDGEHLIVDGTKIKV 327          
BLAST of mRNA_Ecto-sp13_S_contig12484.2063.1 vs. uniprot
Match: A0A0A6YYW3_SACLA (Mitochondrial triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (Fragment) n=1 Tax=Saccharina latissima TaxID=309358 RepID=A0A0A6YYW3_SACLA)

HSP 1 Score: 499 bits (1285), Expect = 2.380e-173
Identity = 240/269 (89.22%), Postives = 259/269 (96.28%), Query Frame = 1
Query:    1 MQVSAQDCWTSGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAAKTAYAQEHGLSVMGCIGESKEERESGATMDVVIGQLKAYAATVKDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKDGSKSVGPVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTHDGEHLIVDGTKIKV 807
            ++V+AQDCWT GNGA+TGETSADMLKDMGV WCIIGHSERRQKGET+ ECAAK AYAQEHGLSVMGCIGESKEERESG+TMDVV+ Q+ AYA +VKDWD FV+AYEPVWAIGTGLTASPEQAQEVHEGLRKW+AENVSASVA+K+RIIYGGSVNAGSAPTLG+K DIDGFLVGGASLKPEFV+IVNAKDGSKSVGPV+VGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDT YMEYMFKYDTVHGV+DGEV+HDGE+LIVDGTKIKV
Sbjct:   85 VKVAAQDCWTKGNGAFTGETSADMLKDMGVNWCIIGHSERRQKGETDAECAAKAAYAQEHGLSVMGCIGESKEERESGSTMDVVLRQMAAYAGSVKDWDNFVVAYEPVWAIGTGLTASPEQAQEVHEGLRKWIAENVSASVAEKIRIIYGGSVNAGSAPTLGAKADIDGFLVGGASLKPEFVDIVNAKDGSKSVGPVTVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTKYMEYMFKYDTVHGVFDGEVSHDGENLIVDGTKIKV 353          
BLAST of mRNA_Ecto-sp13_S_contig12484.2063.1 vs. uniprot
Match: A0A0A6YYW1_DICDH (Mitochondrial triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Dictyota dichotoma TaxID=2876 RepID=A0A0A6YYW1_DICDH)

HSP 1 Score: 475 bits (1223), Expect = 3.120e-163
Identity = 230/272 (84.56%), Postives = 248/272 (91.18%), Query Frame = 1
Query:    1 MQVSAQDCWTSGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAAKTAYAQEHGLSVMGCIGESKEERESGATMDVVIGQLKAYAATVKDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKDGSKSVGPVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTHDGEHLIVDGTKIKVRCQ 816
            ++V+AQDCW  GNGA+TGETSADMLKDMG+ WCIIGHSERRQKGE +EEC AK  YA E G+SV+GCIGE+KEERESGATMDVV  Q+ AY ATVKDWDKFV+AYEPVWAIGTGLTASPEQAQEVH  LRKW+AENVSA+VADKVRIIYGGSVNAG+APTLG K DIDGFLVGGASLKPEFVEIVNAKDGSKSVGPV+VGINGFGRIGRLVLRASLKNPMVNVVSINDPFID  YMEYMFKYDTVHGVY GEV+HDGEHLIVDG  IK+  +
Sbjct:   85 VKVAAQDCWLKGNGAFTGETSADMLKDMGIEWCIIGHSERRQKGEMDEECGAKAGYAIEKGISVIGCIGETKEERESGATMDVVKRQMAAYTATVKDWDKFVVAYEPVWAIGTGLTASPEQAQEVHLELRKWIAENVSAAVADKVRIIYGGSVNAGTAPTLGEKADIDGFLVGGASLKPEFVEIVNAKDGSKSVGPVTVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDAKYMEYMFKYDTVHGVYPGEVSHDGEHLIVDGVSIKLHAE 356          
BLAST of mRNA_Ecto-sp13_S_contig12484.2063.1 vs. uniprot
Match: A0A835ZGW0_9STRA (Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGW0_9STRA)

HSP 1 Score: 402 bits (1033), Expect = 1.460e-134
Identity = 200/275 (72.73%), Postives = 227/275 (82.55%), Query Frame = 1
Query:    1 MQVSAQDCWTSGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAAKTAYAQEHGLSVMGCIGESKEERESGATMDVVIGQLKAYAATV---KDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKDGSKSVGPVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTHDGEHLIVDGTKIKVRCQ 816
            + VS+QDCWT GNGA+TGETSADMLKDMGV W I+GHSERRQKGET+E CA K AYA   GL VM CIGE++EERE+G TM+VV+ Q+ AY   +   K +D FV+AYEPVWAIGTGL A+PE+AQ+VH+GLR WVA N+S+ VA K+RI+YGGSV A SAP+L S+PDIDGFLVGGASLKPEFV IVNA+  S S GPV VGINGFGRIGRLVLRASL NPMVNVV+INDPFID  YMEYMFKYDTVHG Y G V HD EHLIVDG KIK+  Q
Sbjct:   79 VAVSSQDCWT-GNGAHTGETSADMLKDMGVQWTIVGHSERRQKGETDELCAKKAAYAISKGLKVMACIGETREEREAGKTMEVVVRQMAAYKKHLDSSKAFDAFVVAYEPVWAIGTGLVATPEEAQQVHKGLRDWVANNISSDVAAKLRIMYGGSVTAASAPSLASQPDIDGFLVGGASLKPEFVSIVNAQGSSGSAGPVRVGINGFGRIGRLVLRASLANPMVNVVAINDPFIDPKYMEYMFKYDTVHGAYKGTVAHDDEHLIVDGFKIKIHNQ 352          
BLAST of mRNA_Ecto-sp13_S_contig12484.2063.1 vs. uniprot
Match: A7XJT5_9STRA (Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (Fragment) n=1 Tax=Phytophthora undulata TaxID=127444 RepID=A7XJT5_9STRA)

HSP 1 Score: 366 bits (939), Expect = 3.280e-121
Identity = 178/270 (65.93%), Postives = 216/270 (80.00%), Query Frame = 1
Query:    1 MQVSAQDCWTSGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAAKTAYAQEHGLSVMGCIGESKEERESGATMDVVIGQLKAYAATVKDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKDGSKSVG-PVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTHDGEHLIVDGTKIKV 807
            ++VS QD W  GNGA+TGETSA+MLKD+G  + ++GHSERR+KGE+NE  A K AYA E GLSV+ CIGE+K++RE+  T++VV  QL AYA  +KDW   VIAYEPVWAIGTGLTASPEQAQEVH  +RKW+A  VSA+ AD  R+IYGGSV A SAP L  K DIDGFLVGGASLKP+F++I+N  D S  VG PV+V INGFGRIGR+VLRA+  NP++N+V+INDPFI T YMEYM KYDTVHGV++G V+HD E+L V+G  IKV
Sbjct:   37 VRVSGQDVWVQGNGAFTGETSAEMLKDIGXQYTLVGHSERREKGESNELVAKKAAYALEKGLSVIACIGETKDQREAKKTLEVVTEQLDAYAKHIKDWTNVVIAYEPVWAIGTGLTASPEQAQEVHASIRKWLASKVSANAADSTRVIYGGSVTADSAPELSQKNDIDGFLVGGASLKPDFLKIINCHDQSGRVGGPVNVAINGFGRIGRMVLRAAQSNPLINIVAINDPFIPTHYMEYMLKYDTVHGVFNGSVSHDEENLYVNGKPIKV 306          
BLAST of mRNA_Ecto-sp13_S_contig12484.2063.1 vs. uniprot
Match: W2H6W7_PHYPR (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2H6W7_PHYPR)

HSP 1 Score: 361 bits (927), Expect = 1.030e-120
Identity = 173/275 (62.91%), Postives = 215/275 (78.18%), Query Frame = 1
Query:    1 MQVSAQDCWTSGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAAKTAYAQEHGLSVMGCIGESKEERESGATMDVVIGQLKAYAATVKDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKDGSKSVG-PVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTHDGEHLIVDGTKIKVRCQEN 822
            ++VS QD W  GNGA+TGETSA+MLKD+G  + ++GHSERR+KGETNE  A K AYA E GL V+ CIGE+KE RE+  T+  +  QL AYAA +KDW   VIAYEP+WAIGTGLTASPEQAQEVH  +R W+ E VS   ADK R+IYGGSV A +AP L  K DIDGFLVGGASLKP+F+ I+NA++ + +VG  V+V INGFGRIGRLVLRA+ KNP++N+V+INDPFI TTYMEYM +YDTVHG +DG ++HD +H+ V+G  I+V  + N
Sbjct:   74 VRVSGQDVWKQGNGAFTGETSAEMLKDLGAEYTLVGHSERREKGETNEIVAKKAAYALEKGLGVIACIGETKEHREANQTVAYITEQLDAYAAEIKDWTNVVIAYEPIWAIGTGLTASPEQAQEVHASIRAWLKEKVSPDAADKTRVIYGGSVGAKNAPELSQKEDIDGFLVGGASLKPDFLHIINAQNPTTNVGGAVNVAINGFGRIGRLVLRAAAKNPLINIVAINDPFISTTYMEYMLEYDTVHGKFDGSLSHDEKHIFVNGKPIRVFNEMN 348          
BLAST of mRNA_Ecto-sp13_S_contig12484.2063.1 vs. uniprot
Match: A0A485KYA8_9STRA (Aste57867_13505 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KYA8_9STRA)

HSP 1 Score: 366 bits (940), Expect = 1.230e-120
Identity = 182/271 (67.16%), Postives = 219/271 (80.81%), Query Frame = 1
Query:    1 MQVSAQDCWTSGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAAKTAYAQEHGLSVMGCIGESKEERESGATMDVVIGQLKAYAATVKDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAK-DGSKSVG-PVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTHDGEHLIVDGTKIKV 807
            + VS QD W  G GA+TGETSADMLKD G  + I+GHSERRQKGE++EE A K A+A + GLSV+ CIGESK ERE+  T+ VV  QL AYAA VKDW K VIAYEPVWAIGTGLTASP QAQ+VH G+R+W+  NVSA+VA+  RIIYGGSV AG+A  L  + DIDGFLVGGASLKP+F+ I+NAK DG+ SVG PV+V INGFGRIGRLVLRA+  NP++NVV++NDPFI T YMEYM K+DTVHG++ GEV HDG+++ V+G KI+V
Sbjct:   71 VAVSGQDVWHKGAGAFTGETSADMLKDAGANYSIVGHSERRQKGESSEEVARKAAHALQQGLSVIACIGESKGEREANQTLKVVTDQLAAYAAHVKDWTKVVIAYEPVWAIGTGLTASPAQAQDVHAGIREWLKNNVSAAVANSTRIIYGGSVTAGNAKELSGQTDIDGFLVGGASLKPDFLHIINAKSDGTTSVGGPVNVAINGFGRIGRLVLRAAQTNPLINVVAVNDPFIPTEYMEYMLKHDTVHGLFKGEVGHDGDYIHVNGQKIRV 341          
BLAST of mRNA_Ecto-sp13_S_contig12484.2063.1 vs. uniprot
Match: W2JDB1_PHYPR (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) n=3 Tax=Phytophthora parasitica TaxID=4792 RepID=W2JDB1_PHYPR)

HSP 1 Score: 358 bits (920), Expect = 6.640e-120
Identity = 172/275 (62.55%), Postives = 214/275 (77.82%), Query Frame = 1
Query:    1 MQVSAQDCWTSGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAAKTAYAQEHGLSVMGCIGESKEERESGATMDVVIGQLKAYAATVKDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKDGSKSVG-PVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTHDGEHLIVDGTKIKVRCQEN 822
            ++VS QD W  GNGA+TGETSA+MLKD+G  + ++GHSERR+KGETNE  A K AYA E GL V+ CIGE+KE RE+  T+  +  QL AYAA +KDW   VIAYEP+WAIGTGLTASPEQAQEVH  +R W+ E VS   ADK R+IYGGSV A +A  L  K DIDGFLVGGASLKP+F+ I+NA++ + +VG  V+V INGFGRIGRLVLRA+ KNP++N+V+INDPFI TTYMEYM +YDTVHG +DG ++HD +H+ V+G  I+V  + N
Sbjct:   74 VRVSGQDVWKQGNGAFTGETSAEMLKDLGAEYTLVGHSERREKGETNEIVAKKAAYALEKGLGVIACIGETKEHREANQTVTYITEQLDAYAAEIKDWTNVVIAYEPIWAIGTGLTASPEQAQEVHASIRAWLKEKVSPDAADKTRVIYGGSVGAKNASELSQKEDIDGFLVGGASLKPDFLHIINAQNPTTNVGGAVNVAINGFGRIGRLVLRAAAKNPLINIVAINDPFISTTYMEYMLEYDTVHGKFDGSLSHDEKHIFVNGKPIRVFNEMN 348          
BLAST of mRNA_Ecto-sp13_S_contig12484.2063.1 vs. uniprot
Match: A0A7S2RBC4_9STRA (Triosephosphate isomerase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBC4_9STRA)

HSP 1 Score: 353 bits (905), Expect = 3.610e-119
Identity = 167/269 (62.08%), Postives = 204/269 (75.84%), Query Frame = 1
Query:    1 MQVSAQDCWTSGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAAKTAYAQEHGLSVMGCIGESKEERESGATMDVVIGQLKAYAATVKDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKDGSKSVGPVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTHDGEHLIVDGTKIKV 807
            + V  QD W +G GAYTGETSA+M  D+G  W ++GHSERR KGET+ + AAK AYA + GL V+ CIGES EERE+G T++VV  Q+ AYA  + DW   V+AYEP+WAIGTGLTASPEQAQEVHE LR W ++NVS  VA+ +RIIYGGS +  +AP L SKPDIDGFLVGGASLKPEFV+IVN +  + + GP+ +GINGFGRIGRLV+RA+ +NPM+ +V +NDPFI   YMEYMFKYDTVHG Y G V+       VDG +I V
Sbjct:   51 VAVGVQDVWMNGAGAYTGETSAEMAGDLGAKWALVGHSERRGKGETDADVAAKAAYALDKGLGVIACIGESLEEREAGKTLEVVSAQVAAYATQISDWSNVVVAYEPIWAIGTGLTASPEQAQEVHEALRGWFSKNVSPEVANDLRIIYGGSASGKTAPELSSKPDIDGFLVGGASLKPEFVDIVNCRGTANTAGPIRIGINGFGRIGRLVMRAAAENPMIQIVGVNDPFIGIDYMEYMFKYDTVHGTYPGTVSSADGKFSVDGKEIAV 319          
BLAST of mRNA_Ecto-sp13_S_contig12484.2063.1 vs. uniprot
Match: G4Z863_PHYSP (Gp_dh_N domain-containing protein n=420 Tax=Eukaryota TaxID=2759 RepID=G4Z863_PHYSP)

HSP 1 Score: 362 bits (930), Expect = 3.950e-119
Identity = 173/275 (62.91%), Postives = 217/275 (78.91%), Query Frame = 1
Query:    1 MQVSAQDCWTSGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAAKTAYAQEHGLSVMGCIGESKEERESGATMDVVIGQLKAYAATVKDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKDGSKSVG-PVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTHDGEHLIVDGTKIKVRCQEN 822
            ++VS QD W  GNGA+TGETSA+MLKD+G  + ++GHSERR+KGETNE  A K AYA E GL+V+ CIGE+KE RE+  T+  +  QL AYAA +KDW   VIAYEP+WAIGTGLTASP+QAQEVH  +R W+ E VS   A+K R+IYGGSV A +AP L  K DIDGFLVGGASLKP+F++I+NA++ + +VG  V+V INGFGRIGRLVLRA+ KNP++N+V+INDPFI TTYMEYM KYDTVHG + GE++HD +H+ VDG  I+V  + N
Sbjct:   74 VRVSGQDVWKQGNGAFTGETSAEMLKDLGAEYTLVGHSERREKGETNEVVAKKAAYALEKGLAVIACIGETKELREANQTVAFITEQLDAYAAEIKDWTNVVIAYEPIWAIGTGLTASPDQAQEVHASIRAWLKEKVSPEAAEKTRVIYGGSVGAKNAPELSQKADIDGFLVGGASLKPDFLQIINAQNPTDNVGGAVNVAINGFGRIGRLVLRAAAKNPLINIVAINDPFISTTYMEYMLKYDTVHGRFGGEISHDEQHIFVDGKPIRVFNEMN 348          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12484.2063.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP79_ECTSI6.000e-18797.40Triosephosphate isomerase/glyceraldehyde-3-phospha... [more]
A0A0A6YYW3_SACLA2.380e-17389.22Mitochondrial triosephosphate isomerase/glyceralde... [more]
A0A0A6YYW1_DICDH3.120e-16384.56Mitochondrial triosephosphate isomerase/glyceralde... [more]
A0A835ZGW0_9STRA1.460e-13472.73Triosephosphate isomerase/glyceraldehyde-3-phospha... [more]
A7XJT5_9STRA3.280e-12165.93Triosephosphate isomerase/glyceraldehyde-3-phospha... [more]
W2H6W7_PHYPR1.030e-12062.91Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
A0A485KYA8_9STRA1.230e-12067.16Aste57867_13505 protein n=1 Tax=Aphanomyces stella... [more]
W2JDB1_PHYPR6.640e-12062.55Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
A0A7S2RBC4_9STRA3.610e-11962.08Triosephosphate isomerase (Fragment) n=1 Tax=Rhizo... [more]
G4Z863_PHYSP3.950e-11962.91Gp_dh_N domain-containing protein n=420 Tax=Eukary... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12484contigEcto-sp13_S_contig12484:1..4806 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score533.9
Seed ortholog evalue4.5e-149
Seed eggNOG ortholog2880.D7FP79
Model size834
KEGG rclassRC00149,RC00423
KEGG koko:K00134,ko:K01803
KEGG ReactionR01015,R01061
KEGG Pathwayko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010
KEGG ModuleM00001,M00002,M00003,M00165,M00166,M00308,M00552
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.triosephosphate isomerase
EggNOG OGsCOG0057@1,COG0149@1,KOG0657@2759,KOG1643@2759
EC1.2.1.12,5.3.1.1
Cds size834
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12484.2063.1prot_Ecto-sp13_S_contig12484.2063.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12484 1..4806 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462665.4900563-CDS-Ecto-sp13_S_contig12484:0..1121681462665.4900563-CDS-Ecto-sp13_S_contig12484:0..112Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12484 1..112 -
1681462665.5041952-CDS-Ecto-sp13_S_contig12484:1073..12191681462665.5041952-CDS-Ecto-sp13_S_contig12484:1073..1219Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12484 1074..1219 -
1681462665.513725-CDS-Ecto-sp13_S_contig12484:1956..21001681462665.513725-CDS-Ecto-sp13_S_contig12484:1956..2100Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12484 1957..2100 -
1681462665.521978-CDS-Ecto-sp13_S_contig12484:2435..24951681462665.521978-CDS-Ecto-sp13_S_contig12484:2435..2495Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12484 2436..2495 -
1681462665.5297303-CDS-Ecto-sp13_S_contig12484:3161..33001681462665.5297303-CDS-Ecto-sp13_S_contig12484:3161..3300Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12484 3162..3300 -
1681462665.537645-CDS-Ecto-sp13_S_contig12484:4022..41261681462665.537645-CDS-Ecto-sp13_S_contig12484:4022..4126Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12484 4023..4126 -
1681462665.546397-CDS-Ecto-sp13_S_contig12484:4677..48061681462665.546397-CDS-Ecto-sp13_S_contig12484:4677..4806Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12484 4678..4806 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12484.2063.1

>prot_Ecto-sp13_S_contig12484.2063.1 ID=prot_Ecto-sp13_S_contig12484.2063.1|Name=mRNA_Ecto-sp13_S_contig12484.2063.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=278bp
MQVSAQDCWTSGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEEC
AAKTAYAQEHGLSVMGCIGESKEERESGATMDVVIGQLKAYAATVKDWDK
FVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYG
GSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKDGSKSVGPVSVG
INGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYD
GEVTHDGEHLIVDGTKIKVRCQENMEQ*
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mRNA from alignment at Ecto-sp13_S_contig12484:1..4806-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12484.2063.1 ID=mRNA_Ecto-sp13_S_contig12484.2063.1|Name=mRNA_Ecto-sp13_S_contig12484.2063.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4806bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12484:1..4806- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCAGGTGTCAGCGCAAGACTGCTGGACCAGCGGAAACGGCGCCTACAC GGGGGAGACCTCTGCCGACATGCTCAAGGACATGGGCGTCGGATGGTGCA TCATCGGGCACTCGGAGCGAAGGCAGAAGGTACGTGGGGACTGTGGACAG GATGAAATCAACACGGGGGGTACACGCGGCGCACAGAACCGGGCTTCCGA AACAACATGTTGGAGGAGGAGCCCAACGCAGTCTGAGATTCCTCGAAGTT CAAGTGTACCGACGCTTGCCTTGTAGTACGCCAAACAGCAGTAGTAGAAA CAGTGGCGTGGCACATCGGACGATTAGTAATTGGTAGACACACAGGTATA TGTGTATATGCAGGTGATCTGCACTAGCGAACCAACACGGTCCTGGGCTT GGTTAATTCGATCGATGCACCTTGACTAGTCTGTTCTTGTGCTCGTAAGA AAAAATACTCACTTTTTGACGAAAAAAAACTTAAATCAAACACCGCCTCC CGAACCGCAGAGCGTGCTGGTGTTGGCTCTTTGTTTTTGGCAGTTTCCGC GTGCAGGCGTGGACTAGGTTGTTAAGGCACTAAAGGCACTGTTCTAGCCG TGCGCGTTTGTCCTTGCCCCTGCTGCTGGCGATGTCACGATACGATGCGA TACGATGCAACTCTGCCGTGGTAACTCCAGGGCGAGACGAACGAGGAGTG CGCCGCGAAGACTGCCTACGCTCAGGAGCACGGCCTCTCCGTGATGGGGT GCATCGGAGAGAGCAAGGAGGAGAGGGAGTCAGGGTAAGAAGTGAAACAA TCCATTCGTTGACAGTACTTGCTCGCGTCGTCGTCCTTCTTACTATTGTT GTTTAACCGTATGTTGTGCATTTATACGAAGGGTAAGACGTGGAATCGTT TGTCGTCGACGCATCCAAGGCGCGTGTGTCCGCACCAAGCTTCGTGTTGA GAGCTACCGCATTAGCTTCCACGGTACCGAACAGGCAGGTCCATTTTCCG ATTGCTTCTCTGGTCTTCGTTTACCCTTACCCTTTCCAAGACACTTTTTT TGCTGTTTTTTCCTCTCGTCGTCTTCTCTTGGAGTATGGTTGAAGCTGAT CAATTTATTTGGTCTCTTTCGTGGCTATGCTTCAACGAACAAAACTCGAG TTTGGTCCGCTTTTCCTTTCTAATGCACATGTTGATGCTTCGTCTTCGAC GTCTCCTAGAGTACGGTCGAAGCTTTTTTGTCTTTCTCTTAACATGACAC ATCGCATCCATCTCTATCCTAACGAAATTAGTCTCAGATAGATTGACAGC GAGTTCAAAGTGTCAGCGGAAACTACCTGATTTCGTGTTGTACTCTCTTC GTGCCGGTGCCTTAGCCAAAAAAACTCAACGATGGTCGCCCCTTCGTCTT CGGGCGGGACACGTTTCTTTCCTCACATCTCTCAATTGAGCATGATCGAC TCCGATTAATTTTATTTATTTCTTGTTTTCTCGTGCCCGTGCTTTGCCGA AACAAGGGCGACGATGGACGTGGTGATCGGGCAGCTCAAGGCCTACGCCG CCACGGTTAAGGACTGGGACAAGTTCGTCATCGCGTACGAGCCCGTCTGG GCCATCGGCACCGGCCTCACCGCCTCGCCCGAGCAGGCTCAGGAGGTGCG TACGTACGTGTGTTGCCTTTGCATACCACCCTGTTGTTATGAACTGTATT TGTTGGGACCCCGCCTTCGCGAGATATTATGATTATGAGGAAAAAGAACA ACGAAGGGGTACGCAGGCAATGTCGACATCCCTGACCCTAAGCCTAAACC CAAATTCCCATTGCATGCTTCATCCGACATATTTACTCGGTAGATTATCC TTCCAAAGGCTGCTGATTATTTGGGTGTGTTTGGACTAATTGCTCGGGAG ACGCACGCCGAGTGTTGTTGTTCCCGCTGTTGGGTTGATGTTTGCTGACT TTACAAGGTGCCTGTGATATTTTGATACCGCATTCGGCTGCTATCTACGT AATGGCATGGCTGCCGCCGCCGGAAATGTGCTCATGTTTGCTGGAGTAAT GGTTACACGCGATTCCGTGGTCTTCTCTCTCACGGGAGTCCTTGCTTCTG TCGCCCATGATGTGTCCTCTACCTTAAATACGACATGTCCTTGACCCTAG AAAAACAATGAGAACGAGTTGATGCTTTACTTTCTGTCTCACGTTTGTGT TGGATGCAGGTGAACTTGTTTCGGAACACAATTTTGTTTCTCGATTCGTG CATGTTGCTTCGTTTCTGCCATTTTTGCAAACTTTTTTTTCGTTTTTTTT TTTTTTGTCAGGTGCACGAGGGGCTCCGCAAGTGGGTCGCCGAGAACGTC TCCGCCTCTGTGGCTGATAAGGTCAGTCGCTTTGTTGAGATCTACTTCAT TTTAGCATGGTTGCTTGGGCTTGATTTGTTTTCAGTACTTGATTAGCATG CGTCATGGAAGTATGTAGAATTTGATGACACCAACAGTAAACCATGATGT CTGCCAGATGTGTTGTTCGCACTACACATCTTGCCAGTCTTCTTGTGTCG GCACTCAGTAGAACCGTTTAGTCTAGCATATTCCGCAGTGTAGCCTTTTT GTCGCACCCGGTACTCCTGCTAATGATCTCGGCACCCTGAACTGAGTCTG TTGTCCGCGCTCCTTTGGCGTGCTTGCGTTCTTTCGTCGGTTCGTTCGTG GAGCAGGTGCGCATCATCTACGGCGGCAGCGTGAACGCTGGATCCGCACC CACCCTCGGGTCCAAGCCCGACATCGACGGCTTCCTCGTCGGCGGCGCTA GCCTCAAGCCCGAGTTCGTGGAGATCGTGAACGCTAAGGACGGCTCTAAG GTGTGCGGGGTTGGGAGTTGCACGGTTGGTTGCAGAGATTGTGAACGTTG GGAGAAGAAGGGCTAGATAGATGATCAACGCTTAGGAAGGCTGCAGGGTG TGTGAGGTTGGGAGTTGTAGGGTTACGGAGATTGTCAACACTTCGGAAGG GTTCGAGATGAGGTTGGGAGTTGCAGGGGTCAAAGATATCGTGAACGCTG AGGACGCCTCCAAAGGTGTGAGGTTGGGAGTTGTAGAGTTAGAGAAATTG TCAACGCTAAGGATGGGATCGAGGGGTGGGAGTTGTAGGGTAAAAGGTGT CGTTTGGACTACGGTTTCGGAACCATTTGGTTTTGCTGACGTGTTTCATG ACGGCAGTGACGAGCGCATGCATGTGTGGATTGCAGGACAGGCCAATGTT TCACCAGCGACGATTGTTGTGCCACAGTATGTCGTGGGACGCTCCTCTCT CTCTCTTCGGTACACATCTTGTACGACCCGTGCAAGCAGTCAGCAGAGTT CGATGGTATCGGTCGTAGTCTCTGATACATGAGTTTGATTTACCTCCACG CCCCTGATGCATACTGTTCTCGCCCTCCCCCATCGCCCACTATGAGGCCT GCTGTTTCCTTGACCCCGCTCCTCGCGGCGGTAGATGTTCCCCGTGTGAC TCAGTCTTCTTGCAGCCTGTCGAAAACTCCCGCCTGACTTTTTTCTCTCC TCTCTTTTTTTTTGGCATGTGGTCGATCGCGTTATAGTCGGTGGGCCCTG TGTCCGTGGGCATCAACGGCTTCGGCCGCATCGGCCGTCTGGTTCTCCGC GCCTCCCTCAAGAACCCTATGGTGAACGTCGTTTCCATCAACGACCCCTT CATCGACACCACCTACATGGAGTACATGTTCAAGTGAGTCGGCCAAGTGG TTGGTTGCACGCAAGGTGGTGGAGTTGGTTGCCGAGAAAGAGAGACGGGA GTATATAGCGGCGGTTGAATAAGCGGTCGGCGCGTTGTCCGTTGTTTGTC ACAGATCTGCTTTGAGCATGAGAGACTTGTAGTGTTGTGTTTTCTTTTTG TGTGTGTGATTTTTATTTTTACGAAGAAGTCATGCATCTTTACCACGGAC GGTATTTGTACAGCGACTCATTTGTCCGTCTCGTCACACGGGAATGTAAG GTTGGGTTCGTGAATCGACGATTGACCCGTCATTTCCCGAAACGTCTTGT CATTTTGAGATGTAGTCAGCACTAGCTCCGGATCTACAGAGATGTGTGTT TAAAGAAAGGCAATCCCCCTTGTGTGGGCCATCGTTCTTTCTTCGCCAGC TAGTAACCAAGGTCTTGAATCAGTATTTCTCCGCGTTCCCGGCGATATGC ACCCATGGCACATGGCGATGAAGTGCGTGCTGATCTCATGGAATGTCGAC AACGGCTGATTCAACGCCTGAGTTATTTGAGGGCGAAGAAGGCACGAATG TTGTGTGGGGTTCCGTGCATCTTTGGGTACAAGCTCTAGATAGGTGACCC TTCTTTCGCCGGGCGAAAGGAAGGTCGGCTATCTAGAGCTGAGTATGTCT TTATACTTCCACGTTCCAATGAGGGACTAGCTGTGTGTCGAATGACGCAA GATGGTGATGAGAATTGAGAATTGGCCTTTTTTGTGTTGTGTTGTGGCCG CGCTCTTGGGTGTTGAAAGGTAGGATTGTTGAGTATATGTTCCAAGGGAC CGTCGAATGATCCTGCATCATGGAAAACAAGACCGATCGGTACTGACGAG AGAAGTAAATTGCGAGGGCCAACCCATGACGTAATCAAACCTTTTCGTTC GCTGTCTGTGTTGTCGGCTGGGCGCGCTCTTTGGGCAAAAAAAGGTACGA CACCGTGCACGGCGTGTACGACGGGGAGGTGACCCACGACGGGGAGCACC TCATTGTCGACGGCACTAAGATTAAGGTACGTTGTCAAGAAAACATGGAA CAATAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12484:1..4806-

>mRNA_Ecto-sp13_S_contig12484.2063.1 ID=mRNA_Ecto-sp13_S_contig12484.2063.1|Name=mRNA_Ecto-sp13_S_contig12484.2063.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=834bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12484:1..4806- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCAGGTGTCAGCGCAAGACTGCTGGACCAGCGGAAACGGCGCCTACAC
GGGGGAGACCTCTGCCGACATGCTCAAGGACATGGGCGTCGGATGGTGCA
TCATCGGGCACTCGGAGCGAAGGCAGAAGGGCGAGACGAACGAGGAGTGC
GCCGCGAAGACTGCCTACGCTCAGGAGCACGGCCTCTCCGTGATGGGGTG
CATCGGAGAGAGCAAGGAGGAGAGGGAGTCAGGGGCGACGATGGACGTGG
TGATCGGGCAGCTCAAGGCCTACGCCGCCACGGTTAAGGACTGGGACAAG
TTCGTCATCGCGTACGAGCCCGTCTGGGCCATCGGCACCGGCCTCACCGC
CTCGCCCGAGCAGGCTCAGGAGGTGCACGAGGGGCTCCGCAAGTGGGTCG
CCGAGAACGTCTCCGCCTCTGTGGCTGATAAGGTGCGCATCATCTACGGC
GGCAGCGTGAACGCTGGATCCGCACCCACCCTCGGGTCCAAGCCCGACAT
CGACGGCTTCCTCGTCGGCGGCGCTAGCCTCAAGCCCGAGTTCGTGGAGA
TCGTGAACGCTAAGGACGGCTCTAAGTCGGTGGGCCCTGTGTCCGTGGGC
ATCAACGGCTTCGGCCGCATCGGCCGTCTGGTTCTCCGCGCCTCCCTCAA
GAACCCTATGGTGAACGTCGTTTCCATCAACGACCCCTTCATCGACACCA
CCTACATGGAGTACATGTTCAAGTACGACACCGTGCACGGCGTGTACGAC
GGGGAGGTGACCCACGACGGGGAGCACCTCATTGTCGACGGCACTAAGAT
TAAGGTACGTTGTCAAGAAAACATGGAACAATAA
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