prot_Ecto-sp13_S_contig12480.2061.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12480.2061.1
Unique Nameprot_Ecto-sp13_S_contig12480.2061.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1001
Homology
BLAST of mRNA_Ecto-sp13_S_contig12480.2061.1 vs. uniprot
Match: A0A6H5K9R0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R0_9PHAE)

HSP 1 Score: 930 bits (2403), Expect = 0.000e+0
Identity = 775/1006 (77.04%), Postives = 794/1006 (78.93%), Query Frame = 0
Query:    5 RQSARKAEAEAAAQRSGRIAMAEELRQARGQADELRRQLDHRHRLQARDSPAAAREGPRHNDLGLLRGEGPHSVGPASHHPPVAPLLAPVHDHATKGVSNATATPPSAVVDTAEPLPGTGGKEGAAAVVRGADGRAVSMSGEEKPSAPSGGVVPVSAGSGRTTGPGGDITGGKMGVVGSGGGVEPPAAIGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAELDAVKEQMEILKQQLVMVGVQQLALTGVPTGAALLNGRYSGGSGGGPAHPFNDP-AAAXXXXXXXXXXACSTAVGDHHPIPRPPGVGRGXXXXXXXXXASDRFGTTRVTSXXXXXXXXXXXXLCTRTRRNGEKGGDVDGGGSVQSDGERGDNNDDGVGFGDAERLADEDGEDGVGWWARSADKVLLAAGSTTGRGDGRKRCDGDXXXXXXXXXXXXXXXXXXXXPLAEHLPHAPTDKSPPGGVRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------ARHGARSPRGKSCRQKDGVASVSEIAEAGGALGASSSGRKNLRVSWDSISVWSSGSDLTRDLAATSSIGSRSSRSSSGGTDDCGRRRGIPSRGTGAPVADSSSRPQRQKQRRRPGSAHNVVSPPPCSFSSPCASSSALGRQAGAGVRAAPGKGGAGACRELGVAAHDRRRRRSRSAIGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSGGGPPLAGDKYHPRVKTRATAVPGSRRRVMHPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAMKPPNASFSRSTSSSYHDVPAGAADGIGSLRSGGGSRRIAGGKPGSRCLRQGDDGEEETVPMEGHKATTRRCLSPTTGTVLKAAVNRGWDRSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKWRAAGLEAVILSDDDDADEALATLGGESFFDGSLLDLIDDLE 1001
            R+SARKAEAEAA QRS R AMAEELRQARGQADELRRQLDH  RLQARDSPAAAREGPR NDLGLLRGEGPHSVGP SH  PVAPLLA VHDH T+GVSNATA PPSA V+TAEPLPGTGGKEGAAAVVR ADGRAVS+SGEEKP A SGGVVPVSAG GRTTGPGGDITGGK+GV GSG   +P      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAELDAVKEQME+LKQQLVMVGVQQLALTGVPTGAALL+GR+SG  GGGPA PF DP AAA          A STAVGDHHPIP PPGVGRGXXXXXXXXX S+ FG+TRVTS XXXXXXXXXXX                    VQ D ERGDNND GVGFGDAERLAD DG+DGVGWWARSADK+LLA  ST GRGDGR R DG XXXXX       XXXX    PLAEHLP APTDKSP GGVRG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        ARHGARSP GKSCRQ+DGVASVSEI              K LRVSWDSISV SSGSDLTRDLA TSSIGS SSRSSSGGT DCG RRGIP R  GAPVADSSSRPQRQKQRRRPGSAH++VSPPP SFSSPCASSSALGRQAGAGVRAAP  GGAGACRELGVAA DRRR RSRSAIGS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          SGGGPPLAGDKYHPRVKTRATAVPGSRRRVMHPPL XXXXXXXX                                TAMKPPNASFSRSTSSS+HDV  GAADGIGSLRSG GSRR  GGKPGSRCLRQGDDGEEETVPMEG KATTRR  +       K                        XXXXXXXXXX XXXXXXXXTKWRAAGLEAV+LSDDDDADEALATLGGESFFDGSLLDLIDDLE
Sbjct:  447 RESARKAEAEAAVQRSDRTAMAEELRQARGQADELRRQLDHHRRLQARDSPAAAREGPRRNDLGLLRGEGPHSVGPVSHQQPVAPLLARVHDHVTEGVSNATAAPPSAAVNTAEPLPGTGGKEGAAAVVRDADGRAVSISGEEKPPARSGGVVPVSAGGGRTTGPGGDITGGKLGVAGSGSXXQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAELDAVKEQMEVLKQQLVMVGVQQLALTGVPTGAALLSGRHSG-RGGGPARPFKDPPAAAAAAPAVDAADARSTAVGDHHPIPGPPGVGRGXXXXXXXXXXSNGFGSTRVTSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVQGDEERGDNND-GVGFGDAERLADVDGDDGVGWWARSADKLLLAGVSTAGRGDGRNRYDGGXXXXXRGVFSKAXXXXG---PLAEHLPDAPTDKSPAGGVRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARHGARSPWGKSCRQEDGVASVSEIXXXXXXXXXXXXXGKKLRVSWDSISVRSSGSDLTRDLATTSSIGSWSSRSSSGGTGDCGWRRGIPPRSAGAPVADSSSRPQRQKQRRRPGSAHDIVSPPPSSFSSPCASSSALGRQAGAGVRAAPSTGGAGACRELGVAALDRRRCRSRSAIGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPM--------SGGGPPLAGDKYHPRVKTRATAVPGSRRRVMHPPLSXXXXXXXXGVAKKTTGVADCPRNAAVADAVSESGRRRPPPTAMKPPNASFSRSTSSSHHDVATGAADGIGSLRSGRGSRRTTGGKPGSRCLRQGDDGEEETVPMEGLKATTRRSAA-----AFKTXXXXXXXXXX-------------XXXXXXXXXXGXXXXXXXXTKWRAAGLEAVVLSDDDDADEALATLGGESFFDGSLLDLIDDLE 1421          
BLAST of mRNA_Ecto-sp13_S_contig12480.2061.1 vs. uniprot
Match: D7FS85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS85_ECTSI)

HSP 1 Score: 729 bits (1881), Expect = 1.200e-242
Identity = 700/1000 (70.00%), Postives = 711/1000 (71.10%), Query Frame = 0
Query:    6 QSARKAEAEAAAQRSGRIAMAEELRQARGQADELRRQLDHRHRLQARDSPAAAREGPRHNDLGLLRGEGPHSVGPASHHPPVAPLLAPVHDHATKGVSNATATPPSAVVDTAEPLPGTGGKEGAAAVVRGADGRAVSMSGEEKPSAPSGGVVPVSAGSGRTTGPGGDITGGKMGVVGSGGGVEPPAAIGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAELDAVKEQMEILKQQLVMVGVQQLALTGVPTGAALLNGRYSGGSGGGPAHPFNDPAAAXXXXXXXXXXACSTAVGDHHPIPRPPGVGRGXXXXXXXXXASDRFGTTRVTSXXXXXXXXXXXXLCTRTRRNGEKGGDVDGGGSVQSDGERGDNNDDGVGFGDAERLADEDGEDGVGWWARSADKVLLAAGSTTGRGDGRKRCDGDXXXXXXXXXXXXXXXXXXXXPLAEHLPHAPTDKSPPGGVRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARHGARSPRGKSCRQKDGVASVSEIAEAGGALGASSSGRKNLRVSWDSISVWSSGSDLTRDLAATSSIGSRSSRSSSGGTDDCGRRRGIPSRGTGAPVADSSSRPQRQKQRRRPGSAHNVVSPPPCSFSSPCASSSALGRQAGAGVRAAPGKGGAGACRELGVAAHDRRRRRSRSAIGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT----SGGGPPLAGDKYHPRVKTRATAVPGSRRRVMHPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAMKPPNASFSRSTSSSYHDVPAGAADGIGSLRSGGGSRRIAGGKPGSRCLRQGDDGEEETVPMEGHKATTRRCLSPTTGTVLKAAVNRGWDRSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKWRAAGLEAVILSDDDDADEALATLGGESFFDGSLLDLIDDLE 1001
            +S RKAEAEAAAQRSGR AMAEELRQARGQADELRRQLDH  RLQARDSP AAREGPR NDLGLL GEG HS GPASH  PVAPLLAPVHDHATKGVSNATA  PSA VDTAEPLPGTGGKEG AAVVRGADGRAVS+SGEEKPSAPSGGVV VS G GRTTGPGGDITGG  GVVG GGGV PP  I  XXXXXXXXXX                          S  ELD VKEQMEILKQQLVMVGVQQLALTGV TGAALLNGR+SGGSGGGPAHPFNDPAAA          A STAVGD  PIP PPGVGRGXXXXXXXXX SD FG+TRV S XXXXXXXXXXX             DVDGGGSVQ DG RGDNNDDGVGFGDAERL DEDGEDGVGWWARSADK+LLAAGST GRGDGRKR DG XXXXX                LAE LPHAPTD+SPPGGVRG XXXXXXXXXXXXXXXXXXXXXXXX                  CRQ+DGVASVSEIAEAGGA GASSS    LR                                                                                                       RAAPG GGAGACRELGVAA DRRRRRSRS +G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     SGGGPPLAGDKYHPRVKTRATAVPGSRRR+MHP  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    V AGAADGIGSLRSGG  RR  GGKPGSRCLR+GDDGEEETVPMEGHKA TRRCLSPT G V+KAA           XXXXXXXXXXXXXXXXXXXXXXXXXXXX  TKWRAAGLEAVILSDDDDADEALATLGGESFFDGSLLDLIDDLE
Sbjct:  363 ESTRKAEAEAAAQRSGRTAMAEELRQARGQADELRRQLDHHRRLQARDSPVAAREGPRRNDLGLLGGEGAHSSGPASHQQPVAPLLAPVHDHATKGVSNATAASPSAAVDTAEPLPGTGGKEGVAAVVRGADGRAVSISGEEKPSAPSGGVVLVSPGGGRTTGPGGDITGGNFGVVGRGGGVNPPPPIXXXXXXXXXXXXRGCPPPPSPKRVRPCLEGEAVPGAAFS-VELDPVKEQMEILKQQLVMVGVQQLALTGVRTGAALLNGRHSGGSGGGPAHPFNDPAAASPAVDAAA--AHSTAVGDRRPIPGPPGVGRGXXXXXXXXXXSDGFGSTRVMSQXXXXXXXXXXXXXXXXX-------DVDGGGSVQRDGGRGDNNDDGVGFGDAERLDDEDGEDGVGWWARSADKLLLAAGSTAGRGDGRKRYDGXXXXXXRSGGVFSMDGGGRGA-LAEPLPHAPTDRSPPGGVRGGXXXXXXXXXXXXXXXXXXXXXXXX------------------CRQEDGVASVSEIAEAGGAPGASSSXXXKLRXXXX--------------------------------------------------------------------------------------------------XRAAPGNGGAGACRELGVAALDRRRRRSRSTMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAPMSGGGPPLAGDKYHPRVKTRATAVPGSRRRLMHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAGAADGIGSLRSGGXXRRTTGGKPGSRCLRRGDDGEEETVPMEGHKAKTRRCLSPTKGKVVKAAAXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXQETKWRAAGLEAVILSDDDDADEALATLGGESFFDGSLLDLIDDLE 1233          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12480.2061.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K9R0_9PHAE0.000e+077.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS85_ECTSI1.200e-24270.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 229..249
NoneNo IPR availableCOILSCoilCoilcoord: 22..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12480contigEcto-sp13_S_contig12480:489..4978 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12480.2061.1mRNA_Ecto-sp13_S_contig12480.2061.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12480 489..4978 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12480.2061.1 ID=prot_Ecto-sp13_S_contig12480.2061.1|Name=mRNA_Ecto-sp13_S_contig12480.2061.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1001bp
MWTLRQSARKAEAEAAAQRSGRIAMAEELRQARGQADELRRQLDHRHRLQ
ARDSPAAAREGPRHNDLGLLRGEGPHSVGPASHHPPVAPLLAPVHDHATK
GVSNATATPPSAVVDTAEPLPGTGGKEGAAAVVRGADGRAVSMSGEEKPS
APSGGVVPVSAGSGRTTGPGGDITGGKMGVVGSGGGVEPPAAIGVGTAAG
AGVGARGWPPPPSPERARPWSEGEAGAGAAASSAELDAVKEQMEILKQQL
VMVGVQQLALTGVPTGAALLNGRYSGGSGGGPAHPFNDPAAAAAAPAAPA
ADACSTAVGDHHPIPRPPGVGRGGGGAGGAGAASDRFGTTRVTSQQQQQQ
QQQQQELCTRTRRNGEKGGDVDGGGSVQSDGERGDNNDDGVGFGDAERLA
DEDGEDGVGWWARSADKVLLAAGSTTGRGDGRKRCDGDDGGGGGGSGGVF
SMAGGGGGPLAEHLPHAPTDKSPPGGVRGGERGGGGGGGGAAAEAAAAAA
AGGGRGGGGGARHGARSPRGKSCRQKDGVASVSEIAEAGGALGASSSGRK
NLRVSWDSISVWSSGSDLTRDLAATSSIGSRSSRSSSGGTDDCGRRRGIP
SRGTGAPVADSSSRPQRQKQRRRPGSAHNVVSPPPCSFSSPCASSSALGR
QAGAGVRAAPGKGGAGACRELGVAAHDRRRRRSRSAIGSTIGSTIGSTIR
STIGSTIGSSVGSTVGSTMGSTIESTMGSTMGSTSEATMRSTMESTTGSS
TGPTSGGGPPLAGDKYHPRVKTRATAVPGSRRRVMHPPLSGGGTTTTTGA
AMKTTVVADCPRNAAVVVAVSEPGRRRPPPTAMKPPNASFSRSTSSSYHD
VPAGAADGIGSLRSGGGSRRIAGGKPGSRCLRQGDDGEEETVPMEGHKAT
TRRCLSPTTGTVLKAAVNRGWDRSSGGGGGDGGSRGWRKEEGGGGGGGGG
GGGPPQETKWRAAGLEAVILSDDDDADEALATLGGESFFDGSLLDLIDDL
E
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