prot_Ecto-sp13_S_contig9053.20608.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9053.20608.1
Unique Nameprot_Ecto-sp13_S_contig9053.20608.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length470
Homology
BLAST of mRNA_Ecto-sp13_S_contig9053.20608.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE)

HSP 1 Score: 222 bits (566), Expect = 1.740e-64
Identity = 116/167 (69.46%), Postives = 130/167 (77.84%), Query Frame = 0
Query:    4 GRSRCLDAFIVALNQACDGGKRRWYASTLELQLVSLEVCGACRRVPVLHVRVRRRTPRSLWSPCQSHKRADMHSGEGCMSSRVPAVHAFGLTWALPMEILLQSSAIRQRSGSK--RWQMNSSTANLGSMFWLQR-LKWMVFELDTPVSMAPWPASLRQLSFGDHFNQ 167
            GRS CL AFIVALNQ C+G ++RWYASTLELQLVSLE CGACRRVP LHVRV R+TPRSLWSPC+SH      S E C+S+RVPAV A GLTWAL ME+LLQ+SA+  RS SK  R   NSSTA+LGSMFWLQ  LK +VF+ D P S A WPASL QL FGD F+Q
Sbjct:   13 GRSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLVFDSDMPASTASWPASLPQLLFGDRFDQ 179          
BLAST of mRNA_Ecto-sp13_S_contig9053.20608.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 6.680e-57
Identity = 111/174 (63.79%), Postives = 128/174 (73.56%), Query Frame = 0
Query:    1 TIIGRSRCLDAFIVALNQACDGGKRRWYASTLELQLVSLEVCGACRRVPVLHVRVRRRTPRSLWSPCQSHKRADMHSGEGCMSSRVPAVHAFGLTWALPMEILLQSSAIRQRSGS--KRWQMNSSTANLGSMFWLQRLKWMVFELDTPVSMAPWPASLRQLSFGDHFNQSITEV 172
            T  G S+CLDAF+VALNQACDG ++RWY STLELQLVSLEVCGACRRV  LHVRV+ +TP SLW P Q+H   +  S + C+SSRVP V AFGLTWALPM +L Q SA   RSGS  +R   +SS A+L S  W QRLK MVFE D  V+ A WPASL+QLSFG  FNQ+I  V
Sbjct:    2 TTKGNSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMVFESDMTVNTASWPASLQQLSFGCGFNQAIVGV 175          
BLAST of mRNA_Ecto-sp13_S_contig9053.20608.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 4.690e-43
Identity = 92/169 (54.44%), Postives = 111/169 (65.68%), Query Frame = 0
Query:    3 IGRSRCLDAFIVALNQACDGGKRRWYASTLELQLVSLEVCGACRRVPVLHVRVRRRTPRSLWSPCQSHKRADMHSGEGCMSSRVPAVHAFGLTWALPMEILLQSSA--IRQRSGSKRWQMNSSTANLGSMFWLQRLKWMVFELDTPVSMAPWPASLRQLSFGDHFNQSI 169
            +GRS CLDAFIVAL QA DG  +RWY STLELQLVSLE CGACR      V++ R+TP SLWSP +SH      S E C+ SRVPAV A G  WALPMEILL  SA  + Q S +++    SS  + G M W Q+L  ++F  +  V+   WPA L++LSFGD FNQ I
Sbjct:   24 LGRSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKKRSREACIPSRVPAVQANGWMWALPMEILLPRSATELHQVSENRQPTGPSSATSPGRMGWFQKLTRLMFYSERSVNSVSWPACLQELSFGDFFNQPI 192          
BLAST of mRNA_Ecto-sp13_S_contig9053.20608.1 vs. uniprot
Match: A0A6H5K2L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2L2_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 4.480e-42
Identity = 92/166 (55.42%), Postives = 107/166 (64.46%), Query Frame = 0
Query:    4 GRSRCLDAFIVALNQACDGGKRRWYASTLELQLVSLEVCGACRRVPVLHVRVRRRTPRSLWSPCQSHKRADMHSGEGCMSSRVPAVHAFGLTWALPMEILLQSSAIRQRSGSK--RWQMNSSTANLGSMFWLQRLKWMVFELDTPVSMAPWPASLRQLSFGDHFNQ 167
            GR  C+DAFIVALN+ CDGG++RWYASTLELQ VSLE C ACRRVP  H                +     + SG     SR P V A+ LTWAL M++LLQS A+  + GSK  R   +SS ANL SM WLQRLK +V ELDTPV  A WPASL+QLSFG  FN+
Sbjct:   15 GRGECVDAFIVALNRTCDGGEQRWYASTLELQPVSLEFCVACRRVPTSH---------------STSTVGRLVSGV----SRAPVVRAYSLTWALSMDVLLQSCAMELQRGSKYRRSGGHSSAANLASMLWLQRLKRLVLELDTPVITASWPASLQQLSFGYKFNK 161          
BLAST of mRNA_Ecto-sp13_S_contig9053.20608.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 1.840e-32
Identity = 80/166 (48.19%), Postives = 104/166 (62.65%), Query Frame = 0
Query:    7 RCLDAFIVALNQACDGGKRRWYASTLELQLVSLEVCGACRRVPVLHVRVRRRTPRSLWSPCQSHKRADMHSGEGCMSSRVPAVHAFGLTWALPMEILL--QSSAIRQRSGSKRWQMNSSTANLGSMFWLQRLKWMVFELDT---PVSMAPWPASLRQLSFGDHFNQ 167
            RCLDAF+VAL+Q  +GG++RWY STL+LQL SLE CGACR  P+LHV V   TP +LWS  Q++  A         S+RVPAV A GLTWA P E  L   SS +  R  S + Q++  TANL S+ W Q L+ +V +      P+ M  WP+SL+ L+F   F+Q
Sbjct:    8 RCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWSLGQANPTAGT-------STRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVVWPQGLQRLVMDCTVFIIPLEMMSWPSSLKSLTFAGIFDQ 166          
BLAST of mRNA_Ecto-sp13_S_contig9053.20608.1 vs. uniprot
Match: A0A6H5L3M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3M5_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 6.050e-32
Identity = 79/168 (47.02%), Postives = 103/168 (61.31%), Query Frame = 0
Query:    8 CLDAFIVALN-QACDGGKRRWYASTLELQLVSLEVCGACRRVPVLHVRVRRRTPRSLWSPCQSHKRADMHSGEGCMSSRVPAVHAFGLTWALPMEILLQSSAIRQRSGSKRWQMNS-STANLGSMFWLQRLKWMVFELDTPVSMAPWPASLRQLSFGDHFNQSITEVV 173
            CLDAF+  LN Q+C  GK+RWY S  ELQLVSL+ CG CR   +L VRV    P SLWSP +S   A   +      +RVPAV A+G TW++P++ LL+   +R  + ++  +  S   A L S+ W Q LK + F+LDT V  A WPASL+ L+FG  FNQ I  VV
Sbjct:  103 CLDAFVAVLNHQSCVEGKKRWYTSIRELQLVSLKFCGVCRSTSILRVRVEHNAPPSLWSPTKSFSYALPDAW-----NRVPAVRAYGWTWSIPVDTLLKVCDLRYWAKAELSRRGSFPEAKLASVVWPQGLKQLEFDLDTAVEKASWPASLQSLTFGCSFNQPILGVV 265          
BLAST of mRNA_Ecto-sp13_S_contig9053.20608.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 8.690e-31
Identity = 73/148 (49.32%), Postives = 102/148 (68.92%), Query Frame = 0
Query:    5 RSRCLDAFIVALNQACDGGKRRWYASTLELQLVSLEVCGACRRVPVLHVRVRRRTPRSLWSPCQSHKRADMHSGEGCMSSRVPAVHAFGLTWALPMEILLQSSAIRQRSGSKRWQM--NSSTANLGS-MFWLQRLKWMVFELDTPVSM 149
            R+RCLDAF++AL+QAC+GG++RWYASTLELQL SL++C ACR   +LHV V  +TPRSLWS   +  R +  S    +SSRVP V A  LTWAL ME LL+ +AI   + S+R ++  +S  ++LGS + W + L  +V   D+ ++M
Sbjct:    8 RTRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVLYTDSDIAM 155          
BLAST of mRNA_Ecto-sp13_S_contig9053.20608.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 1.600e-30
Identity = 70/148 (47.30%), Postives = 90/148 (60.81%), Query Frame = 0
Query:    4 GRSRCLDAFIVALNQACDGGKRRWYASTLELQLVSLEVCGACRRVPVLHVRVRRRTPRSLWSPCQSHKRADMHSGEGCMSSRVPAVHAFGLTWALPMEILLQSSAIRQRSGSKRWQMNSS--TANLGSMFWLQRLKWMVFELDTPVSM 149
            G +R  DAF +AL+QAC+GG++RWY ST ELQL SL++C ACR  P LHVRV   TP SLWSP       +  S +  + SRVP V A  LTWA  ME L+Q +AI   S S+R +M      A+LGS+ W   L  +V + D  + M
Sbjct:    5 GYTRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVVWPLGLTQLVLDTDFHIPM 152          
BLAST of mRNA_Ecto-sp13_S_contig9053.20608.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 2.000e-30
Identity = 73/151 (48.34%), Postives = 90/151 (59.60%), Query Frame = 0
Query:    4 GRSRCLDAFIVALNQACDGGKRRWYASTLELQLVSLEVCGACRRVPVLHVRVRRRTPRSLWSPCQSHKRADMHSGEGCMSSRVPAVHAFGLTWALPMEILLQSSAIRQRSGSKRWQMN--SSTANLGSMFWLQRLKWMVFELDTPVSMAPW 152
            G    LD  IVALNQACDG ++RWY STLELQLVSLE+CGACR   +LHV VR  TP +LWS   S       S E C S+RVPAV A   TWALPM+ L Q +A   +  ++R   +  S  A++ S+ W + LK +VF    P     W
Sbjct:   85 GGGSSLDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQRSPEVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVESVVWPESLKRLVFSRRMPGKAVWW 235          
BLAST of mRNA_Ecto-sp13_S_contig9053.20608.1 vs. uniprot
Match: D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 8.410e-27
Identity = 55/73 (75.34%), Postives = 61/73 (83.56%), Query Frame = 0
Query:    5 RSRCLDAFIVALNQACDGGKRRWYASTLELQLVSLEVCGACRRVPVLHVRVRRRTPRSLWSP----CQSHKRA 73
            RS+CLDAF+VALNQ CDG ++RWYASTLELQLVSLE CGACR VP LHVRV RRTPRSLWSP      +HKR+
Sbjct:   38 RSKCLDAFVVALNQTCDGQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWSPRTTPITAHKRS 110          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9053.20608.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLV1_9PHAE1.740e-6469.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNI6_9PHAE6.680e-5763.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8K9_9PHAE4.690e-4354.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2L2_9PHAE4.480e-4255.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1V9_9PHAE1.840e-3248.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3M5_9PHAE6.050e-3247.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LIJ3_9PHAE8.690e-3149.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7F9_ECTSI1.600e-3047.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTK8_ECTSI2.000e-3048.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0Z9_ECTSI8.410e-2775.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 145..383
e-value: 1.3E-12
score: 48.8
IPR008615FNIPPFAMPF05725FNIPcoord: 275..317
e-value: 2.0E-4
score: 21.4
coord: 231..273
e-value: 3.2E-7
score: 30.4
coord: 153..185
e-value: 6.1E-5
score: 23.1
coord: 407..449
e-value: 4.5E-10
score: 39.5
coord: 187..215
e-value: 1.2E-5
score: 25.4
coord: 319..360
e-value: 6.0E-6
score: 26.3
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 140..249
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 209..377
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 363..469
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 209..377
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 363..469
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 140..249
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 132..451

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9053contigEcto-sp13_S_contig9053:4016..5425 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9053.20608.1mRNA_Ecto-sp13_S_contig9053.20608.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9053 4016..5425 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9053.20608.1 ID=prot_Ecto-sp13_S_contig9053.20608.1|Name=mRNA_Ecto-sp13_S_contig9053.20608.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=470bp
TIIGRSRCLDAFIVALNQACDGGKRRWYASTLELQLVSLEVCGACRRVPV
LHVRVRRRTPRSLWSPCQSHKRADMHSGEGCMSSRVPAVHAFGLTWALPM
EILLQSSAIRQRSGSKRWQMNSSTANLGSMFWLQRLKWMVFELDTPVSMA
PWPASLRQLSFGDHFNQSITEVVWPASLQQLEFGDEFNQPIAEVEWPASL
QKLSFGDEFNQPIAEVVWSISLRQLWFGCNFNQPLADVLWPTSLQQLSFE
DQFNQPIAEVVWPASLQQLSFGYHFDQNIAEVEWPASLQQLSLGYRFNQT
IAEVEWPASLQQLSLGYRFNQPIAEVVWPAFLQQLSFGDKFNQPIAEVVW
PISLQQMSFGWFFNQPIARVAWPSFLQRLSVGCMFNQPIFEVEWPACLQQ
LSFGYFFNQPIAEVVWPASLQQLSFGYHFNQPIAEIVLPASLQQLWFGYH
FNQPIAEVEWPASLQRLSFG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP