mRNA_Ecto-sp13_S_contig90283.20587.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig90283.20587.1 vs. uniprot
Match: D7G3M8_ECTSI (Similar to metal response element-binding transcription factor-1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3M8_ECTSI) HSP 1 Score: 82.8 bits (203), Expect = 1.890e-17 Identity = 37/39 (94.87%), Postives = 38/39 (97.44%), Query Frame = 1
Query: 1 SAAGYECLICGKSFSKACKLARHAATHTGDKPFVCSEAG 117
S AGYECLICGKSFSKACKLARHAATHTG+KPFVCSEAG
Sbjct: 73 SVAGYECLICGKSFSKACKLARHAATHTGEKPFVCSEAG 111
BLAST of mRNA_Ecto-sp13_S_contig90283.20587.1 vs. uniprot
Match: A0A0D7BG45_9AGAR (Uncharacterized protein n=1 Tax=Cylindrobasidium torrendii FP15055 ss-10 TaxID=1314674 RepID=A0A0D7BG45_9AGAR) HSP 1 Score: 50.4 bits (119), Expect = 6.050e-7 Identity = 21/35 (60.00%), Postives = 25/35 (71.43%), Query Frame = 1
Query: 13 YECLICGKSFSKACKLARHAATHTGDKPFVCSEAG 117
+EC ICGK FS+ L H THTG+KP+VCSE G
Sbjct: 27 HECNICGKRFSRPSGLKIHVTTHTGEKPYVCSEDG 61
BLAST of mRNA_Ecto-sp13_S_contig90283.20587.1 vs. uniprot
Match: A0A167J4X2_PHYB8 (C2H2-type zinc finger transcription factor (Fragment) n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167J4X2_PHYB8) HSP 1 Score: 47.4 bits (111), Expect = 3.880e-6 Identity = 18/33 (54.55%), Postives = 23/33 (69.70%), Query Frame = 1
Query: 13 YECLICGKSFSKACKLARHAATHTGDKPFVCSE 111
Y C+ CGK FS+ L H +HTG+KPFVC+E
Sbjct: 1 YVCMFCGKKFSRPSSLRIHTYSHTGEKPFVCTE 33
BLAST of mRNA_Ecto-sp13_S_contig90283.20587.1 vs. uniprot
Match: A0A177V4U0_9BASI (Inositol-pentakisphosphate 2-kinase n=2 Tax=Tilletia TaxID=13289 RepID=A0A177V4U0_9BASI) HSP 1 Score: 50.4 bits (119), Expect = 4.740e-6 Identity = 22/38 (57.89%), Postives = 26/38 (68.42%), Query Frame = 1
Query: 4 AAGYECLICGKSFSKACKLARHAATHTGDKPFVCSEAG 117
AA YEC CGK FS+ L H +HTG+KP+VC EAG
Sbjct: 792 AAKYECTWCGKRFSRPSSLKIHYHSHTGEKPYVCDEAG 829
BLAST of mRNA_Ecto-sp13_S_contig90283.20587.1 vs. uniprot
Match: A0A8C6UD84_9GOBI (Pleiomorphic adenoma gene-like 2 n=1 Tax=Neogobius melanostomus TaxID=47308 RepID=A0A8C6UD84_9GOBI) HSP 1 Score: 48.9 bits (115), Expect = 1.670e-5 Identity = 21/36 (58.33%), Postives = 26/36 (72.22%), Query Frame = 1
Query: 4 AAGYECLICGKSFSKACKLARHAATHTGDKPFVCSE 111
A+G ECL+CG FS KL HA +H+GDKPF CS+
Sbjct: 20 ASGSECLVCGALFSSQDKLRLHALSHSGDKPFHCSQ 55
BLAST of mRNA_Ecto-sp13_S_contig90283.20587.1 vs. uniprot
Match: A0A7L2UJ95_BALRX (ZN777 protein (Fragment) n=3 Tax=Neognathae TaxID=8825 RepID=A0A7L2UJ95_BALRX) HSP 1 Score: 45.4 bits (106), Expect = 3.270e-5 Identity = 18/33 (54.55%), Postives = 22/33 (66.67%), Query Frame = 1
Query: 13 YECLICGKSFSKACKLARHAATHTGDKPFVCSE 111
Y C CGKSF + L RH THTG+KP+ C+E
Sbjct: 27 YICTDCGKSFGRYADLIRHQRTHTGEKPYKCTE 59
BLAST of mRNA_Ecto-sp13_S_contig90283.20587.1 vs. uniprot
Match: A0A8J4XFP9_CLAMG (Zinc finger protein PLAGL2-like (Fragment) n=1 Tax=Clarias magur TaxID=1594786 RepID=A0A8J4XFP9_CLAMG) HSP 1 Score: 47.0 bits (110), Expect = 4.910e-5 Identity = 20/34 (58.82%), Postives = 24/34 (70.59%), Query Frame = 1
Query: 10 GYECLICGKSFSKACKLARHAATHTGDKPFVCSE 111
G ECL+CG FS KL HA +HTG+KPF CS+
Sbjct: 131 GNECLVCGTIFSSQDKLQIHAFSHTGEKPFHCSQ 164
BLAST of mRNA_Ecto-sp13_S_contig90283.20587.1 vs. uniprot
Match: K5W6A4_PHACS (Uncharacterized protein (Fragment) n=1 Tax=Phanerochaete carnosa (strain HHB-10118-sp) TaxID=650164 RepID=K5W6A4_PHACS) HSP 1 Score: 45.1 bits (105), Expect = 6.550e-5 Identity = 20/40 (50.00%), Postives = 27/40 (67.50%), Query Frame = 1
Query: 1 SAAG-YECLICGKSFSKACKLARHAATHTGDKPFVCSEAG 117
SA+G YEC+ CGK F++ L H THTG++P+VC G
Sbjct: 29 SASGRYECMWCGKGFTRPSSLRIHMNTHTGERPYVCPFEG 68
BLAST of mRNA_Ecto-sp13_S_contig90283.20587.1 vs. uniprot
Match: A0A397VFU7_9GLOM (Uncharacterized protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397VFU7_9GLOM) HSP 1 Score: 47.0 bits (110), Expect = 7.940e-5 Identity = 19/35 (54.29%), Postives = 23/35 (65.71%), Query Frame = 1
Query: 13 YECLICGKSFSKACKLARHAATHTGDKPFVCSEAG 117
Y+C C K FS+ L H +HTG+KPFVCSE G
Sbjct: 222 YQCPYCSKRFSRPSSLRIHTYSHTGEKPFVCSEPG 256
BLAST of mRNA_Ecto-sp13_S_contig90283.20587.1 vs. uniprot
Match: E6QZS0_CRYGW (Uncharacterized protein n=6 Tax=Cryptococcus gattii species complex TaxID=1884637 RepID=E6QZS0_CRYGW) HSP 1 Score: 47.0 bits (110), Expect = 7.990e-5 Identity = 18/35 (51.43%), Postives = 24/35 (68.57%), Query Frame = 1
Query: 13 YECLICGKSFSKACKLARHAATHTGDKPFVCSEAG 117
Y C C K+FS+ L H +HTG++PFVC+EAG
Sbjct: 605 YTCTYCAKTFSRPSSLKIHTYSHTGERPFVCNEAG 639 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig90283.20587.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig90283.20587.1 >prot_Ecto-sp13_S_contig90283.20587.1 ID=prot_Ecto-sp13_S_contig90283.20587.1|Name=mRNA_Ecto-sp13_S_contig90283.20587.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=40bp SAAGYECLICGKSFSKACKLARHAATHTGDKPFVCSEAG*back to top mRNA from alignment at Ecto-sp13_S_contig90283:420..539- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig90283.20587.1 ID=mRNA_Ecto-sp13_S_contig90283.20587.1|Name=mRNA_Ecto-sp13_S_contig90283.20587.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=120bp|location=Sequence derived from alignment at Ecto-sp13_S_contig90283:420..539- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig90283:420..539- >mRNA_Ecto-sp13_S_contig90283.20587.1 ID=mRNA_Ecto-sp13_S_contig90283.20587.1|Name=mRNA_Ecto-sp13_S_contig90283.20587.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=120bp|location=Sequence derived from alignment at Ecto-sp13_S_contig90283:420..539- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |