mRNA_Ecto-sp13_S_contig9026.20585.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9026.20585.1 vs. uniprot
Match: D8LFZ1_ECTSI (Elongation of fatty acids protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFZ1_ECTSI) HSP 1 Score: 306 bits (785), Expect = 8.340e-104 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 1
Query: 40 RTVPHLVQILYVYGFKYTICAKPTMWYGSGAVGMWTQAFVFSKIPELGDTIFVVLRKKPLIFLHWYHHVTVLLYCWHSYFEQTTYGLYFISMNYTVHALMYLYYGLAGMRIRLCKPYYITTMQISQMVVGIAVCVAGGYYMAMGE 474
RTVPHLVQILYVYGFKYTICAKPTMWYGSGAVGMWTQAFVFSKIPELGDTIFVVLRKKPLIFLHWYHHVTVLLYCWHSYFEQTTYGLYFISMNYTVHALMYLYYGLAGMRIRLCKPYYITTMQISQMVVGIAVCVAGGYYMAMGE
Sbjct: 43 RTVPHLVQILYVYGFKYTICAKPTMWYGSGAVGMWTQAFVFSKIPELGDTIFVVLRKKPLIFLHWYHHVTVLLYCWHSYFEQTTYGLYFISMNYTVHALMYLYYGLAGMRIRLCKPYYITTMQISQMVVGIAVCVAGGYYMAMGE 187
BLAST of mRNA_Ecto-sp13_S_contig9026.20585.1 vs. uniprot
Match: A0A6H5KTN4_9PHAE (Elongation of fatty acids protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTN4_9PHAE) HSP 1 Score: 306 bits (784), Expect = 1.260e-102 Identity = 144/145 (99.31%), Postives = 145/145 (100.00%), Query Frame = 1
Query: 40 RTVPHLVQILYVYGFKYTICAKPTMWYGSGAVGMWTQAFVFSKIPELGDTIFVVLRKKPLIFLHWYHHVTVLLYCWHSYFEQTTYGLYFISMNYTVHALMYLYYGLAGMRIRLCKPYYITTMQISQMVVGIAVCVAGGYYMAMGE 474
RTVPHL+QILYVYGFKYTICAKPTMWYGSGAVGMWTQAFVFSKIPELGDTIFVVLRKKPLIFLHWYHHVTVLLYCWHSYFEQTTYGLYFISMNYTVHALMYLYYGLAGMRIRLCKPYYITTMQISQMVVGIAVCVAGGYYMAMGE
Sbjct: 112 RTVPHLIQILYVYGFKYTICAKPTMWYGSGAVGMWTQAFVFSKIPELGDTIFVVLRKKPLIFLHWYHHVTVLLYCWHSYFEQTTYGLYFISMNYTVHALMYLYYGLAGMRIRLCKPYYITTMQISQMVVGIAVCVAGGYYMAMGE 256
BLAST of mRNA_Ecto-sp13_S_contig9026.20585.1 vs. uniprot
Match: A0A836CLW9_9STRA (Elongation of fatty acids protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLW9_9STRA) HSP 1 Score: 219 bits (559), Expect = 2.350e-69 Identity = 99/144 (68.75%), Postives = 116/144 (80.56%), Query Frame = 1
Query: 40 RTVPHLVQILYVYGFKYTICAKPTMWYGSGAVGMWTQAFVFSKIPELGDTIFVVLRKKPLIFLHWYHHVTVLLYCWHSYFEQTTYGLYFISMNYTVHALMYLYYGLAGMRIRLCKPYYITTMQISQMVVGIAVCVAGGYYMAMG 471
RTVPHL ++ + G+KYTI + W G GAVG W Q FVFSKIPELGDT+F+VLRK+PLIFLHWYHHVTVLLYCWHSY+ + YGLYF +MNY+VHA+MYLYY LA +RIRLCKPYY+TT+QISQM VGIAVC + Y G
Sbjct: 59 RTVPHLANVIALKGYKYTITEQGRDWVGGGAVGFWAQMFVFSKIPELGDTVFIVLRKRPLIFLHWYHHVTVLLYCWHSYYNEAAYGLYFAAMNYSVHAVMYLYYALAALRIRLCKPYYVTTLQISQMFVGIAVCCSCWIYYKKG 202
BLAST of mRNA_Ecto-sp13_S_contig9026.20585.1 vs. uniprot
Match: A0A835ZI52_9STRA (Elongation of fatty acids protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI52_9STRA) HSP 1 Score: 211 bits (536), Expect = 3.660e-65 Identity = 96/140 (68.57%), Postives = 112/140 (80.00%), Query Frame = 1
Query: 40 RTVPHLVQILYVYGFKYTICAKPTMWYGSGAVGMWTQAFVFSKIPELGDTIFVVLRKKPLIFLHWYHHVTVLLYCWHSYFEQTTYGLYFISMNYTVHALMYLYYGLAGMRIRLCKPYYITTMQISQMVVGIAVCVAGGYY 459
RTVPH+ +LY G+ YTI A W G GAVG+W FV+SK PELGDT+F++LRKKPLIFLHWYHHVTVLLYCWHSY+ Q YGLYF +MNY+VHA+MYLYY LA ++IRLCKPYYIT MQISQM +GI VC + YY
Sbjct: 59 RTVPHVFYVLYKEGYTYTIIADGRDWCGGGAVGVWALWFVYSKTPELGDTVFIILRKKPLIFLHWYHHVTVLLYCWHSYYYQEAYGLYFAAMNYSVHAVMYLYYALAAVKIRLCKPYYITAMQISQMFMGIFVCGSAWYY 198
BLAST of mRNA_Ecto-sp13_S_contig9026.20585.1 vs. uniprot
Match: A0A024UN53_9STRA (Elongation of fatty acids protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UN53_9STRA) HSP 1 Score: 179 bits (455), Expect = 2.310e-53 Identity = 84/153 (54.90%), Postives = 110/153 (71.90%), Query Frame = 1
Query: 7 TNSVLGPTSIPRTVPHLVQILYVYGFKYTICAKPTMWYGSGAVGMWTQAFVFSKIPELGDTIFVVLRKKPLIFLHWYHHVTVLLYCWHSYFEQTTYGLYFISMNYTVHALMYLYYGLAGMRIRLCKPYYITTMQISQMVVGIAVCVAGGYYMA 465
T SV RTVP LV +Y +G +++C+ T+ YG+G VG W F+FSKIPEL DT FVV+RKKPL FLHWYHH+TVLLYCWH+Y ++ GLYF++MNYTVHA+MY+YY L + R Y +T +Q+SQMVVG+AVCVA +++
Sbjct: 89 TLSVFSACGALRTVPFLVHSIYHHGVYHSVCSDATLHYGNGPVGFWVSLFIFSKIPELFDTFFVVIRKKPLRFLHWYHHITVLLYCWHAYSVLSSSGLYFVAMNYTVHAVMYMYYFLTALGYRPRWAYVVTMLQMSQMVVGVAVCVANVIFLS 241
BLAST of mRNA_Ecto-sp13_S_contig9026.20585.1 vs. uniprot
Match: A0A6G0WL95_9STRA (Elongation of fatty acids protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WL95_9STRA) HSP 1 Score: 178 bits (452), Expect = 3.620e-53 Identity = 79/144 (54.86%), Postives = 106/144 (73.61%), Query Frame = 1
Query: 40 RTVPHLVQILYVYGFKYTICAKPTMWYGSGAVGMWTQAFVFSKIPELGDTIFVVLRKKPLIFLHWYHHVTVLLYCWHSYFEQTTYGLYFISMNYTVHALMYLYYGLAGMRIRLCKPYYITTMQISQMVVGIAVCVAGGYYMAMG 471
RTVP L+ LY G + +C++ YG G V +WT F+FSKIPEL DT+F+VLRKKPLIFLHWYHH+TVL++CWH+Y + GL+F++MNYTVHA+MY YY LA + IR ++T +Q++QMV+G+AVC G YY+ G
Sbjct: 86 RTVPFLLNSLYTNGLHHNVCSEAMPHYGHGPVALWTTLFIFSKIPELVDTMFIVLRKKPLIFLHWYHHITVLMFCWHAYAHLSPSGLFFVAMNYTVHAVMYFYYFLAAVGIRASWAKFVTVIQLTQMVIGVAVCAMGVYYLRSG 229
BLAST of mRNA_Ecto-sp13_S_contig9026.20585.1 vs. uniprot
Match: W4FNI5_9STRA (Elongation of fatty acids protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FNI5_9STRA) HSP 1 Score: 178 bits (451), Expect = 8.050e-53 Identity = 80/142 (56.34%), Postives = 108/142 (76.06%), Query Frame = 1
Query: 40 RTVPHLVQILYVYGFKYTICAKPTMWYGSGAVGMWTQAFVFSKIPELGDTIFVVLRKKPLIFLHWYHHVTVLLYCWHSYFEQTTYGLYFISMNYTVHALMYLYYGLAGMRIRLCKPYYITTMQISQMVVGIAVCVAGGYYMA 465
RTVP L+ +Y +G +++C+ T YG+G VG+W F+FSKIPEL DT FVV+RKKPL FLHWYHH+TVLL+CWH+Y +++ GLYF++MNYTVHA+MY+YY L + R Y +TT+Q+SQMVVG+AVC A Y++
Sbjct: 98 RTVPFLLHSIYHHGVYHSVCSDATAHYGNGPVGLWVSMFIFSKIPELFDTFFVVIRKKPLRFLHWYHHITVLLFCWHAYSVRSSSGLYFVAMNYTVHAVMYMYYFLTAVGYRPRWAYLVTTLQLSQMVVGVAVCAASVIYLS 239
BLAST of mRNA_Ecto-sp13_S_contig9026.20585.1 vs. uniprot
Match: A0A067BVY4_SAPPC (Elongation of fatty acids protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BVY4_SAPPC) HSP 1 Score: 175 bits (443), Expect = 1.980e-52 Identity = 83/157 (52.87%), Postives = 110/157 (70.06%), Query Frame = 1
Query: 1 LPTNSVLGPTSIPRTVPHLVQILYVYGFKYTICAKPTMWYGSGAVGMWTQAFVFSKIPELGDTIFVVLRKKPLIFLHWYHHVTVLLYCWHSYFEQTTYGLYFISMNYTVHALMYLYYGLAGMRIRLCKPYYITTMQISQMVVGIAVCVAGGYYMAMG 471
L T S++G RTVP L+ L V G+ + +CA+ YG G V W F+FSKIPEL DT+F+VLRKKPLIFLHWYHH+TVL++CWH+Y + GL+F++MNYTVH +MY YY LA + IR ++T +Q+ QMVVG+AVC +G YY+ G
Sbjct: 20 LATFSIMGAI---RTVPFLLNTLAVRGWHHAVCAEAMPHYGHGPVSFWVTLFIFSKIPELVDTMFIVLRKKPLIFLHWYHHITVLMFCWHAYANLSPSGLFFVAMNYTVHGVMYFYYFLAAIGIRASWAKFVTIIQLLQMVVGVAVCASGVYYIKAG 173
BLAST of mRNA_Ecto-sp13_S_contig9026.20585.1 vs. uniprot
Match: A0A485LJ03_9STRA (Elongation of fatty acids protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJ03_9STRA) HSP 1 Score: 175 bits (444), Expect = 6.540e-52 Identity = 78/141 (55.32%), Postives = 105/141 (74.47%), Query Frame = 1
Query: 40 RTVPHLVQILYVYGFKYTICAKPTMWYGSGAVGMWTQAFVFSKIPELGDTIFVVLRKKPLIFLHWYHHVTVLLYCWHSYFEQTTYGLYFISMNYTVHALMYLYYGLAGMRIRLCKPYYITTMQISQMVVGIAVCVAGGYYM 462
RTVP L+ L+ G + +C + YG G+VG W FVFSKIPEL DT+F+VLRKKPLIFLHWYHH+TVL++CWH+Y + GL+F++MNYTVHA+MY YY LA + IR+ ++T +Q++QMV+G+AVC G YY+
Sbjct: 86 RTVPFLLNSLWTNGIHHNVCGEAFNHYGRGSVGFWITLFVFSKIPELVDTMFIVLRKKPLIFLHWYHHITVLMFCWHAYANLSPSGLFFVAMNYTVHAVMYFYYFLAAINIRVSWAKFVTVIQLAQMVIGVAVCAMGIYYV 226
BLAST of mRNA_Ecto-sp13_S_contig9026.20585.1 vs. uniprot
Match: T0R9K8_SAPDV (Elongation of fatty acids protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0R9K8_SAPDV) HSP 1 Score: 175 bits (443), Expect = 1.190e-51 Identity = 83/157 (52.87%), Postives = 110/157 (70.06%), Query Frame = 1
Query: 1 LPTNSVLGPTSIPRTVPHLVQILYVYGFKYTICAKPTMWYGSGAVGMWTQAFVFSKIPELGDTIFVVLRKKPLIFLHWYHHVTVLLYCWHSYFEQTTYGLYFISMNYTVHALMYLYYGLAGMRIRLCKPYYITTMQISQMVVGIAVCVAGGYYMAMG 471
L T S++G RTVP L+ L V G+ + +CA+ YG G V W F+FSKIPEL DT+F+VLRKKPLIFLHWYHH+TVL++CWH+Y + GL+F++MNYTVH +MY YY LA + IR ++T +Q+ QMVVG+AVC +G YY+ G
Sbjct: 81 LATFSIMGAI---RTVPFLLNTLAVRGWHHAVCAEAMPHYGHGPVSFWVTLFIFSKIPELVDTMFIVLRKKPLIFLHWYHHITVLMFCWHAYANLSPSGLFFVAMNYTVHGVMYFYYFLAAIGIRASWAKFVTIIQLLQMVVGVAVCASGVYYVKAG 234 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9026.20585.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9026.20585.1 >prot_Ecto-sp13_S_contig9026.20585.1 ID=prot_Ecto-sp13_S_contig9026.20585.1|Name=mRNA_Ecto-sp13_S_contig9026.20585.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=160bp LPTNSVLGPTSIPRTVPHLVQILYVYGFKYTICAKPTMWYGSGAVGMWTQback to top mRNA from alignment at Ecto-sp13_S_contig9026:1309..2469- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9026.20585.1 ID=mRNA_Ecto-sp13_S_contig9026.20585.1|Name=mRNA_Ecto-sp13_S_contig9026.20585.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1161bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9026:1309..2469- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9026:1309..2469- >mRNA_Ecto-sp13_S_contig9026.20585.1 ID=mRNA_Ecto-sp13_S_contig9026.20585.1|Name=mRNA_Ecto-sp13_S_contig9026.20585.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=480bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9026:1309..2469- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |