prot_Ecto-sp13_S_contig9024.20582.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9024.20582.1
Unique Nameprot_Ecto-sp13_S_contig9024.20582.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length340
Homology
BLAST of mRNA_Ecto-sp13_S_contig9024.20582.1 vs. uniprot
Match: D7G0T8_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T8_ECTSI)

HSP 1 Score: 496 bits (1277), Expect = 6.520e-167
Identity = 280/339 (82.60%), Postives = 292/339 (86.14%), Query Frame = 0
Query:    1 MWEDVLQKHSAHHLEQSEDTQLLQVLKNAYEESLIDVEMRAECDPSFTKGFFSVEVVLLTKLLSRGYSLEERVGKSYTSEKDRRLVDFMPVVERLVLHTAANQNPEVDSASPTSSPFSSSASYLSPSPSLPLDPSSSTSPLSYGPXXXXXXXXXXXXXXXIPPAPFGANAVTTKNKGKQRAIIELGSDDEXXXXXYDFSPQPATPTAPKSKPFVDTFGAASSSGGDGESSGTVGGGTDAGELSVGVAASGGAVVGGPGRKFQPSKPAHLGYGGWASTDVTLEGLINSVRAEEKSPMIASKLVHNPTELLKVLENVQHEALMKQPDCLTVQLFEHQRQAT 339
            +WEDVLQKH A  LEQ EDTQLLQVLKNAY+ESLIDVEMRAECDPSFTKGFF+VEVVL+TKLLSRGYSLEERVGKSYT EK+ RLVDFMPVVERLVLHTA NQN E DSAS   SP SSSASYLSPSPSLP  PSSSTSP    P         XXXXXXIPPAP GANAVT KNKGKQRAI ELGSDDE     YDF PQPATPTAP S+PFV+TFGAAS+SGGDG SSGTVGGG DA EL VGVAASGGAVVGGPGRKF+PSKPAHLGYGG +STDVTLEGLINSVRAEE+SP I SKLVHNPTELLKVLENVQH AL+KQPDCLTVQLFEHQ QAT
Sbjct:  227 IWEDVLQKHGALQLEQPEDTQLLQVLKNAYKESLIDVEMRAECDPSFTKGFFTVEVVLITKLLSRGYSLEERVGKSYTPEKNHRLVDFMPVVERLVLHTAVNQNAEADSASSACSPLSSSASYLSPSPSLPRTPSSSTSP---SPCGSPPALPPXXXXXXIPPAPSGANAVTKKNKGKQRAITELGSDDEEEEGEYDFPPQPATPTAPTSQPFVNTFGAASNSGGDGGSSGTVGGGADASELGVGVAASGGAVVGGPGRKFRPSKPAHLGYGGQSSTDVTLEGLINSVRAEERSPSIVSKLVHNPTELLKVLENVQHGALIKQPDCLTVQLFEHQLQAT 562          
BLAST of mRNA_Ecto-sp13_S_contig9024.20582.1 vs. uniprot
Match: D7G0S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S9_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 6.940e-15
Identity = 44/80 (55.00%), Postives = 59/80 (73.75%), Query Frame = 0
Query:  258 GRKFQPSKPAHLGYGGWASTDVTLEGLINSVRAEEKSPMIASKLVHNPTELLKVLENVQHEALMKQPDCLTVQLFEHQRQ 337
            GR F PS   + GYGG AS DV+L GLI+SVRAEE++  +  + + +P ++L  LEN+QH +L KQPDCLTV L+EHQ+Q
Sbjct:  521 GRAFTPS---NKGYGGRASLDVSLSGLIDSVRAEERNNNVEERRIIHPAKMLLELENLQHRSLAKQPDCLTVDLYEHQKQ 597          
BLAST of mRNA_Ecto-sp13_S_contig9024.20582.1 vs. uniprot
Match: A0A6H5KW09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW09_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 1.700e-14
Identity = 46/94 (48.94%), Postives = 63/94 (67.02%), Query Frame = 0
Query:  244 VGVAASGGAVVGGPGRKFQPSKPAHLGYGGWASTDVTLEGLINSVRAEEKSPMIASKLVHNPTELLKVLENVQHEALMKQPDCLTVQLFEHQRQ 337
             GV+ +G       GR+F PS       GG+AS DV+L GLINSVR EE +  I    +H+P ++L  LEN+QH +L+KQPDCL+V+L+EHQ+Q
Sbjct:  537 AGVSGAGAGASSVLGREFTPSTKD---MGGYASIDVSLSGLINSVRDEETNSYIEGGQIHHPAKMLLELENLQHRSLVKQPDCLSVELYEHQKQ 627          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9024.20582.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0T8_ECTSI6.520e-16782.60Helicase ATP-binding domain-containing protein n=1... [more]
D7G0S9_ECTSI6.940e-1555.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KW09_9PHAE1.700e-1448.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9024contigEcto-sp13_S_contig9024:3368..5796 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9024.20582.1mRNA_Ecto-sp13_S_contig9024.20582.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9024 309..5919 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9024.20582.1 ID=prot_Ecto-sp13_S_contig9024.20582.1|Name=mRNA_Ecto-sp13_S_contig9024.20582.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=340bp
MWEDVLQKHSAHHLEQSEDTQLLQVLKNAYEESLIDVEMRAECDPSFTKG
FFSVEVVLLTKLLSRGYSLEERVGKSYTSEKDRRLVDFMPVVERLVLHTA
ANQNPEVDSASPTSSPFSSSASYLSPSPSLPLDPSSSTSPLSYGPPPALP
PTSSSSSSSSIPPAPFGANAVTTKNKGKQRAIIELGSDDEEEEEEYDFSP
QPATPTAPKSKPFVDTFGAASSSGGDGESSGTVGGGTDAGELSVGVAASG
GAVVGGPGRKFQPSKPAHLGYGGWASTDVTLEGLINSVRAEEKSPMIASK
LVHNPTELLKVLENVQHEALMKQPDCLTVQLFEHQRQAT*
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